RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 NUDT22Q9BRQ3 303 aa2.95□□□□□ -1.94
XRCC4-203ENST00000396027 C1orf43Q9BWL3 253 aa2.95□□□□□ -1.94
XRCC4-203ENST00000396027 GFRA4Q9GZZ7 299 aa2.95□□□□□ -1.94
XRCC4-203ENST00000396027 TMEM222Q9H0R3 208 aa2.95□□□□□ -1.94
XRCC4-203ENST00000396027 TMEM167BQ9NRX6 74 aa2.95□□□□□ -1.94
XRCC4-203ENST00000396027 ZNF581Q9P0T4 197 aa2.95□□□□□ -1.94
XRCC4-203ENST00000396027 KLF13Q9Y2Y9 288 aaPredicted RBP2.95□□□□□ -1.94
XRCC4-203ENST00000396027 INSIG2Q9Y5U4 225 aa2.95□□□□□ -1.94
XRCC4-203ENST00000396027 TMEM131Q92545 1883 aa2.95□□□□□ -1.94
XRCC4-203ENST00000396027 A0A087X0K7 114 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 A0A0A6YYD5 115 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 TRAV24A0A0B4J272 114 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 DDTLA6NHG4 134 aaPredicted RBP2.94□□□□□ -1.94
XRCC4-203ENST00000396027 LINC01549A6NIU2 74 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 FAM90A5PA8MXJ8 464 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 CHEK1O14757 476 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 TIMM23O14925 209 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 IGLV3-25P01717 112 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 IGLC6P0CF74 106 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 LINC00694P0DN24 101 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 MYOD1P15172 320 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 RPL7P18124 248 aaKnown RBP2.94□□□□□ -1.94
XRCC4-203ENST00000396027 WT1P19544 449 aaPredicted RBP2.94□□□□□ -1.94
XRCC4-203ENST00000396027 BCL3P20749 454 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 ACRV1P26436 265 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 HLA-DMBP28068 263 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 PRDX2P32119 198 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 DYNLT3P51808 116 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 ZNF136P52737 540 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 ATP5EP56381 51 aaPredicted RBP2.94□□□□□ -1.94
XRCC4-203ENST00000396027 RAE1P78406 368 aaKnown RBP2.94□□□□□ -1.94
XRCC4-203ENST00000396027 CD164Q04900 197 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 FAM53BQ14153 422 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 WFDC2Q14508 124 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 ZNF141Q15928 474 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 ANXA2RQ3ZCQ2 193 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 ZNF672Q499Z4 452 aaPredicted RBP2.94□□□□□ -1.94
XRCC4-203ENST00000396027 TMEM170BQ5T4T1 132 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 C1orf195Q5TG92 126 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 C1orf140Q5VVS0 124 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 C2orf91Q6ZV80 131 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 TCF23Q7RTU1 214 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 CEND1Q8N111 149 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 C1orf158Q8N1D5 194 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 ANKRD29Q8N6D5 301 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 ELSPBP1Q96BH3 223 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 BMFQ96LC9 184 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 MCRIP2Q9BUT9 160 aaKnown RBP2.94□□□□□ -1.94
XRCC4-203ENST00000396027 SLC25A39Q9BZJ4 359 aaPredicted RBP2.94□□□□□ -1.94
XRCC4-203ENST00000396027 DYNLRB1Q9NP97 96 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 DLL3Q9NYJ7 618 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 ZNF256Q9Y2P7 627 aaPredicted RBP2.94□□□□□ -1.94
XRCC4-203ENST00000396027 RCL1Q9Y2P8 373 aaKnown RBP2.94□□□□□ -1.94
XRCC4-203ENST00000396027 WNT6Q9Y6F9 365 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 COL16A1Q07092 1604 aaPredicted RBP2.94□□□□□ -1.94
XRCC4-203ENST00000396027 KIAA1671Q9BY89 1806 aa2.94□□□□□ -1.94
XRCC4-203ENST00000396027 IGKV6D-21A0A0A0MT36 114 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 A0A0U1RQV1 116 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 MBD3L4A6NDZ8 208 aaPredicted RBP2.93□□□□□ -1.94
XRCC4-203ENST00000396027 MBD3L3A6NE82 208 aaPredicted RBP2.93□□□□□ -1.94
XRCC4-203ENST00000396027 MBD3L5A6NJ08 208 aaPredicted RBP2.93□□□□□ -1.94
XRCC4-203ENST00000396027 IGLL5B9A064 214 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 CCDC179H3BU77 68 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 HOXA3O43365 443 aaPredicted RBP2.93□□□□□ -1.94
XRCC4-203ENST00000396027 STC2O76061 302 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 IGHMP01871 453 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 RBP4P02753 201 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 P0DMU3 169 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 FAM231AP0DMU4 169 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 FAM231CP0DMU5 169 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 CXCL8P10145 99 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 VPREB1P12018 145 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 GP9P14770 177 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 COX7CP15954 63 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 TNFRSF4P43489 277 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 LOXL3P58215 753 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 HERVK_113P63121 156 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 QRFPP83859 136 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 NUMA1Q14980 2115 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 GUSBP1Q15486 140 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 SPRNQ5BIV9 151 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 EBLN2Q6P2I7 272 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 Q6ZVH6 145 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.93□□□□□ -1.94
XRCC4-203ENST00000396027 HAPLN4Q86UW8 402 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 LYPD6Q86Y78 171 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 RPRMLQ8N4K4 120 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 RAB42Q8N4Z0 105 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 WDR31Q8NA23 367 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 ZNF721Q8TF20 911 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 LRRC29Q8WV35 223 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 SSMEM1Q8WWF3 244 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 RND1Q92730 232 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 IFI27L1Q96BM0 104 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 TIMD4Q96H15 378 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 LINC00615Q96LM1 132 aaPredicted RBP2.93□□□□□ -1.94
XRCC4-203ENST00000396027 C9orf85Q96MD7 179 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 C20orf78Q9BR46 151 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 ZNF442Q9H7R0 627 aa2.93□□□□□ -1.94
XRCC4-203ENST00000396027 STARD5Q9NSY2 213 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms