RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 WRBO00258 174 aa15.15■□□□□ 0.02
SNCA-203ENST00000394986 SYNGR2O43760 224 aa15.15■□□□□ 0.02
SNCA-203ENST00000394986 POLR2GP62487 172 aaKnown RBP eCLIP15.15■□□□□ 0.02
SNCA-203ENST00000394986 FAM106AQ4KMX7 169 aa15.15■□□□□ 0.02
SNCA-203ENST00000394986 SPSB3Q6PJ21 355 aa15.15■□□□□ 0.02
SNCA-203ENST00000394986 REC114Q7Z4M0 266 aa15.15■□□□□ 0.02
SNCA-203ENST00000394986 ZBTB8BQ8NAP8 495 aaPredicted RBP15.15■□□□□ 0.02
SNCA-203ENST00000394986 ATP6V0BQ99437 205 aa15.15■□□□□ 0.02
SNCA-203ENST00000394986 U3KQ87 197 aa15.15■□□□□ 0.02
SNCA-203ENST00000394986 FAM25EA8MYX2 175 aa15.14■□□□□ 0.01
SNCA-203ENST00000394986 LGALS9O00182 355 aa15.14■□□□□ 0.01
SNCA-203ENST00000394986 GNG7O60262 68 aa15.14■□□□□ 0.01
SNCA-203ENST00000394986 MED6O75586 246 aa15.14■□□□□ 0.01
SNCA-203ENST00000394986 SCGB1D2O95969 90 aa15.14■□□□□ 0.01
SNCA-203ENST00000394986 FCGR2BP31994 310 aaPredicted RBP15.14■□□□□ 0.01
SNCA-203ENST00000394986 NKX2-1P43699 371 aaPredicted RBP15.14■□□□□ 0.01
SNCA-203ENST00000394986 RNASEH2CQ8TDP1 164 aaKnown RBP15.14■□□□□ 0.01
SNCA-203ENST00000394986 CACNG8Q8WXS5 425 aa15.14■□□□□ 0.01
SNCA-203ENST00000394986 TXN2Q99757 166 aa15.14■□□□□ 0.01
SNCA-203ENST00000394986 ZNF436Q9C0F3 470 aaPredicted RBP15.14■□□□□ 0.01
SNCA-203ENST00000394986 GSKIPQ9P0R6 139 aa15.14■□□□□ 0.01
SNCA-203ENST00000394986 SELENOKQ9Y6D0 94 aa15.14■□□□□ 0.01
SNCA-203ENST00000394986 WI2-2373I1.2A0A1W2PRP0 233 aa15.13■□□□□ 0.01
SNCA-203ENST00000394986 C2orf70A6NJV1 201 aa15.13■□□□□ 0.01
SNCA-203ENST00000394986 ID3Q02535 119 aa15.13■□□□□ 0.01
SNCA-203ENST00000394986 TM4SF20Q53R12 229 aa15.13■□□□□ 0.01
SNCA-203ENST00000394986 PRR25Q96S07 402 aa15.13■□□□□ 0.01
SNCA-203ENST00000394986 MARVELD1Q9BSK0 173 aa15.13■□□□□ 0.01
SNCA-203ENST00000394986 PAIP2BQ9ULR5 123 aaKnown RBP15.13■□□□□ 0.01
SNCA-203ENST00000394986 TMEM213A2RRL7 107 aa15.12■□□□□ 0.01
SNCA-203ENST00000394986 C15orf62A8K5M9 175 aa15.12■□□□□ 0.01
SNCA-203ENST00000394986 H3BP45 60 aa15.12■□□□□ 0.01
SNCA-203ENST00000394986 NUPL2O15504 423 aaKnown RBP15.12■□□□□ 0.01
SNCA-203ENST00000394986 IGLV1-51P01701 117 aa15.12■□□□□ 0.01
SNCA-203ENST00000394986 NPBWR1P48145 328 aa15.12■□□□□ 0.01
SNCA-203ENST00000394986 TMEM190Q8WZ59 177 aa15.12■□□□□ 0.01
SNCA-203ENST00000394986 GAR1Q9NY12 217 aaKnown RBP15.12■□□□□ 0.01
SNCA-203ENST00000394986 RPS10-NUDT3A0A1W2PQS6 291 aa15.11■□□□□ 0.01
SNCA-203ENST00000394986 C5orf51A6NDU8 294 aa15.11■□□□□ 0.01
SNCA-203ENST00000394986 A8MWP6 167 aa15.11■□□□□ 0.01
SNCA-203ENST00000394986 SSSCA1O60232 199 aa15.11■□□□□ 0.01
SNCA-203ENST00000394986 IFNA4P05014 189 aa15.11■□□□□ 0.01
SNCA-203ENST00000394986 FOLR2P14207 255 aa15.11■□□□□ 0.01
SNCA-203ENST00000394986 PRSS54Q6PEW0 395 aa15.11■□□□□ 0.01
SNCA-203ENST00000394986 NOXA1Q86UR1 476 aa15.11■□□□□ 0.01
SNCA-203ENST00000394986 OR4X1Q8NH49 305 aa15.11■□□□□ 0.01
SNCA-203ENST00000394986 CIB3Q96Q77 187 aaPredicted RBP15.11■□□□□ 0.01
SNCA-203ENST00000394986 GPN1Q9HCN4 374 aaPredicted RBP15.11■□□□□ 0.01
SNCA-203ENST00000394986 NDUFA4O00483 81 aa15.1■□□□□ 0.01
SNCA-203ENST00000394986 ZNF207O43670 478 aaKnown RBP15.1■□□□□ 0.01
SNCA-203ENST00000394986 LY86O95711 162 aa15.1■□□□□ 0.01
SNCA-203ENST00000394986 TMEM50AO95807 157 aa15.1■□□□□ 0.01
SNCA-203ENST00000394986 RND2P52198 227 aa15.1■□□□□ 0.01
SNCA-203ENST00000394986 SPANXN5Q5MJ07 72 aa15.1■□□□□ 0.01
SNCA-203ENST00000394986 SLC16A13Q7RTY0 426 aa15.1■□□□□ 0.01
SNCA-203ENST00000394986 C20orf24Q9BUV8 137 aa15.1■□□□□ 0.01
SNCA-203ENST00000394986 K7EIL1 84 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 PRAF2O60831 178 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 CLN5O75503 358 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 YIF1AO95070 293 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 MBPP02686 304 aaPredicted RBP15.09■□□□□ 0.01
SNCA-203ENST00000394986 CD69Q07108 199 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 ACY3Q96HD9 319 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 SIGLEC8Q9NYZ4 499 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 ZNF256Q9Y2P7 627 aaPredicted RBP15.09■□□□□ 0.01
SNCA-203ENST00000394986 RCL1Q9Y2P8 373 aaKnown RBP15.09■□□□□ 0.01
SNCA-203ENST00000394986 UFC1Q9Y3C8 167 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 IZUMO1RA6ND01 250 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 SNRPGP15A8MWD9 76 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 CBLN1P23435 193 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 RELQ04864 619 aaPredicted RBP15.09■□□□□ 0.01
SNCA-203ENST00000394986 MRAPQ8TCY5 172 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 DYNLRB2Q8TF09 96 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 PALMDQ9NP74 551 aa15.09■□□□□ 0.01
SNCA-203ENST00000394986 GOSR2O14653 212 aa15.08■□□□□ 0
SNCA-203ENST00000394986 SIX6O95475 246 aa15.08■□□□□ 0
SNCA-203ENST00000394986 PTTG1O95997 202 aa15.08■□□□□ 0
SNCA-203ENST00000394986 SLC25A4P12235 298 aa15.08■□□□□ 0
SNCA-203ENST00000394986 ATP5IP56385 69 aaPredicted RBP15.08■□□□□ 0
SNCA-203ENST00000394986 RAB11AP62491 216 aa15.08■□□□□ 0
SNCA-203ENST00000394986 TIGITQ495A1 244 aa15.08■□□□□ 0
SNCA-203ENST00000394986 ETFRF1Q6IPR1 90 aa15.08■□□□□ 0
SNCA-203ENST00000394986 GSG1LQ6UXU4 331 aa15.08■□□□□ 0
SNCA-203ENST00000394986 NPIPB3Q92617 1050 aa15.08■□□□□ 0
SNCA-203ENST00000394986 C2orf50Q96LR7 162 aa15.08■□□□□ 0
SNCA-203ENST00000394986 PSENENQ9NZ42 101 aa15.08■□□□□ 0
SNCA-203ENST00000394986 PRKDCP78527 4128 aaKnown RBP15.07■□□□□ 0
SNCA-203ENST00000394986 IGKV1-17P01599 117 aa15.07■□□□□ 0
SNCA-203ENST00000394986 IGLC1P0CG04 106 aa15.07■□□□□ 0
SNCA-203ENST00000394986 PAX9P55771 341 aa15.07■□□□□ 0
SNCA-203ENST00000394986 CD300EQ496F6 205 aaPredicted RBP15.07■□□□□ 0
SNCA-203ENST00000394986 TMEM116Q8NCL8 245 aa15.07■□□□□ 0
SNCA-203ENST00000394986 DAZ1Q9NQZ3 744 aaKnown RBP15.07■□□□□ 0
SNCA-203ENST00000394986 ZMAT5Q9UDW3 170 aaKnown RBP15.07■□□□□ 0
SNCA-203ENST00000394986 MLXQ9UH92 298 aa15.07■□□□□ 0
SNCA-203ENST00000394986 STRAPQ9Y3F4 350 aaKnown RBP15.07■□□□□ 0
SNCA-203ENST00000394986 LSM5Q9Y4Y9 91 aaKnown RBP15.07■□□□□ 0
SNCA-203ENST00000394986 PUS1Q9Y606 427 aaKnown RBP eCLIP15.07■□□□□ 0
SNCA-203ENST00000394986 GP9P14770 177 aa15.06■□□□□ 0
SNCA-203ENST00000394986 RPP30P78346 268 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms