RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 GNG4P50150 75 aa12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 HLA-DRB5Q30154 266 aa12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 RASL11BQ9BPW5 248 aa12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 FUT9Q9Y231 359 aa12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 ITPR1Q14643 2758 aa12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 PPP1R2P9O14990 202 aa12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 CXCL1P09341 107 aa12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 BPIFB3P59826 476 aa12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 WT1-ASQ06250 92 aa12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 KCNIP4Q6PIL6 250 aa12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 LINC00479Q96M42 142 aa12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 SFTPCP11686 197 aa12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 FABP4P15090 132 aa12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 CD81P60033 236 aa12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 MRPL54Q6P161 138 aaKnown RBP12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 ZNF439Q8NDP4 499 aa12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 OR2J3O76001 311 aa12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 LINC00305Q7Z4B0 112 aa12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 RBM14Q96PK6 669 aaKnown RBP12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 WNT10AQ9GZT5 417 aa12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 FOXA2Q9Y261 457 aaPredicted RBP12.86□□□□□ -0.35
SMARCD1-202ENST00000394963 A0A1W2PPI3 338 aa12.85□□□□□ -0.35
SMARCD1-202ENST00000394963 HELTA6NFD8 242 aa12.85□□□□□ -0.35
SMARCD1-202ENST00000394963 VDAC2P45880 294 aaPredicted RBP12.85□□□□□ -0.35
SMARCD1-202ENST00000394963 PDPNQ86YL7 162 aa12.85□□□□□ -0.35
SMARCD1-202ENST00000394963 MANBALQ9NQG1 85 aa12.85□□□□□ -0.35
SMARCD1-202ENST00000394963 BUB1B-PAK6H3BSN5 160 aa12.85□□□□□ -0.35
SMARCD1-202ENST00000394963 J3KRW8 73 aa12.85□□□□□ -0.35
SMARCD1-202ENST00000394963 CAMPP49913 170 aa12.85□□□□□ -0.35
SMARCD1-202ENST00000394963 P2RX4Q99571 388 aa12.85□□□□□ -0.35
SMARCD1-202ENST00000394963 PAXXQ9BUH6 204 aa12.85□□□□□ -0.35
SMARCD1-202ENST00000394963 DNAJC4Q9NNZ3 241 aa12.85□□□□□ -0.35
SMARCD1-202ENST00000394963 COLCA2A8K830 154 aa12.85□□□□□ -0.35
SMARCD1-202ENST00000394963 GNG5P63218 68 aa12.85□□□□□ -0.35
SMARCD1-202ENST00000394963 VMO1Q7Z5L0 202 aa12.84□□□□□ -0.35
SMARCD1-202ENST00000394963 CCL19Q99731 98 aa12.84□□□□□ -0.35
SMARCD1-202ENST00000394963 C11orf1Q9H5F2 150 aa12.84□□□□□ -0.35
SMARCD1-202ENST00000394963 CA1P00915 261 aaPredicted RBP12.84□□□□□ -0.35
SMARCD1-202ENST00000394963 OR10D4PQ8NGN7 298 aa12.84□□□□□ -0.35
SMARCD1-202ENST00000394963 CGB1A6NKQ9 187 aa12.84□□□□□ -0.35
SMARCD1-202ENST00000394963 FCGR2BP31994 310 aaPredicted RBP12.84□□□□□ -0.35
SMARCD1-202ENST00000394963 KIAA1644Q3SXP7 199 aa12.84□□□□□ -0.35
SMARCD1-202ENST00000394963 TMEM14BQ9NUH8 114 aa12.84□□□□□ -0.35
SMARCD1-202ENST00000394963 TMSB15BA0A087X1C1 80 aa12.83□□□□□ -0.36
SMARCD1-202ENST00000394963 PGPA6NDG6 321 aa12.83□□□□□ -0.36
SMARCD1-202ENST00000394963 CD69Q07108 199 aa12.83□□□□□ -0.36
SMARCD1-202ENST00000394963 DPPA3Q6W0C5 159 aa12.83□□□□□ -0.36
SMARCD1-202ENST00000394963 DAZAP1Q96EP5 407 aaKnown RBP12.83□□□□□ -0.36
SMARCD1-202ENST00000394963 TOLLIPQ9H0E2 274 aa12.83□□□□□ -0.36
SMARCD1-202ENST00000394963 TRBV23-1A0A0A0MS06 115 aa12.83□□□□□ -0.36
SMARCD1-202ENST00000394963 MPDU1O75352 247 aa12.83□□□□□ -0.36
SMARCD1-202ENST00000394963 LGALS7P47929 136 aa12.83□□□□□ -0.36
SMARCD1-202ENST00000394963 RPL23P62829 140 aaKnown RBP12.83□□□□□ -0.36
SMARCD1-202ENST00000394963 RNASE2P10153 161 aaKnown RBP12.83□□□□□ -0.36
SMARCD1-202ENST00000394963 SSX8Q7RTT4 187 aa12.83□□□□□ -0.36
SMARCD1-202ENST00000394963 DUX5Q96PT3 197 aa12.83□□□□□ -0.36
SMARCD1-202ENST00000394963 FAM90A2PQ658T7 463 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 RUSC1-AS1Q66K80 236 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 OR2T10Q8NGZ9 312 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 FN1P02751 2386 aaKnown RBP12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 KHDC1LQ5JSQ8 128 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 CLEC2AQ6UVW9 174 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 UNQ5815/PRO19632Q6UWF5 114 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 CYP2G1PQ6ZSU1 146 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 TMEM144Q7Z5S9 345 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 SDF2L1Q9HCN8 221 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 HELZ2Q9BYK8 2649 aaKnown RBP12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 IL4P05112 153 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 CGB3P0DN86 165 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 CGB7P0DN87 165 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 OR10G8Q8NGN5 311 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 TMEM170AQ8WVE7 144 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 MBD3L1Q8WWY6 194 aa12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 YTHDF2Q9Y5A9 579 aaKnown RBP12.82□□□□□ -0.36
SMARCD1-202ENST00000394963 FCN3O75636 299 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 GPR61Q9BZJ8 451 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 RNASE7Q9H1E1 156 aaKnown RBP12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 TRAV40A0A0B4J280 105 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 C8orf88P0DMB2 117 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 PRSS8Q16651 343 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 IMMP2LQ96T52 175 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 FNDC4Q9H6D8 234 aaPredicted RBP12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 SIGLEC9Q9Y336 463 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 TIMM9Q9Y5J7 89 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 A0A1W2PPR1 153 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 HYPMO75409 117 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 IER3P46695 156 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 GFI1BQ5VTD9 330 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 OR5AN1Q8NGI8 311 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 DDB2Q92466 427 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 BET1LQ9NYM9 111 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 TRAPPC1Q9Y5R8 145 aa12.81□□□□□ -0.36
SMARCD1-202ENST00000394963 CNN1P51911 297 aaKnown RBP12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 PNRC1Q12796 327 aaPredicted RBP12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 C3orf36Q3SXR2 165 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 BAGE3Q86Y29 109 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 BAGE2Q86Y30 109 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 OR1L4Q8NGR5 311 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 NEU4Q8WWR8 484 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms