RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 CA7P43166 264 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 TCL1AP56279 114 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 RELQ04864 619 aaPredicted RBP8.11□□□□□ -1.11
COL17A1-203ENST00000393211 KIAA1644Q3SXP7 199 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 DMRTA1Q5VZB9 504 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 ETFRF1Q6IPR1 90 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 SEM1Q6ZVN7 128 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 PDPNQ86YL7 162 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 LINC00311Q8N616 119 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 OR4C13Q8NGP0 309 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 ZNF596Q8TC21 504 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 FLYWCH2Q96CP2 140 aaKnown RBP8.11□□□□□ -1.11
COL17A1-203ENST00000393211 FAM122AQ96E09 287 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 HARBI1Q96MB7 349 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 RBM14Q96PK6 669 aaKnown RBP8.11□□□□□ -1.11
COL17A1-203ENST00000393211 CCL13Q99616 98 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 KLF12Q9Y4X4 402 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 RNF114Q9Y508 228 aa8.11□□□□□ -1.11
COL17A1-203ENST00000393211 SPINK4O60575 86 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 HYPMO75409 117 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 CEACAM4O75871 244 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 TNFRSF1AP19438 455 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 HNRNPA3P51991 378 aaKnown RBP8.1□□□□□ -1.11
COL17A1-203ENST00000393211 CT83Q5H943 113 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 ZNF474Q6S9Z5 364 aaPredicted RBP8.1□□□□□ -1.11
COL17A1-203ENST00000393211 SPACA3Q8IXA5 215 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 NUP37Q8NFH4 326 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 NUP35Q8NFH5 326 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 NUDT10Q8NFP7 164 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 TMEM186Q96B77 213 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 NUDT11Q96G61 164 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 TXN2Q99757 166 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 ZNF355PQ9NSJ1 428 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 C1RLQ9NZP8 487 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 LAMTOR2Q9Y2Q5 125 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 DSCAMO60469 2012 aa8.1□□□□□ -1.11
COL17A1-203ENST00000393211 YLPM1P49750 1951 aaKnown RBP8.09□□□□□ -1.11
COL17A1-203ENST00000393211 HEATR1Q9H583 2144 aaKnown RBP8.09□□□□□ -1.11
COL17A1-203ENST00000393211 HSBP1O75506 76 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 FSTL3O95633 263 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 SFTPCP11686 197 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 MFAP2P55001 183 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 SLC35B1P78383 322 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 SLAQ13239 276 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 MLANAQ16655 118 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 FAM201AQ5SY85 155 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 PVRIGQ6DKI7 326 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 ZCCHC24Q8N2G6 241 aaKnown RBP8.09□□□□□ -1.11
COL17A1-203ENST00000393211 FAM216BQ8N7L0 139 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 OR10W1Q8NGF6 305 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 OR8B3Q8NGG8 313 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 OR2T6Q8NHC8 308 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 ORAOV1Q8WV07 137 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 FXYD5Q96DB9 178 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 SNRNP40Q96DI7 357 aaKnown RBP8.09□□□□□ -1.11
COL17A1-203ENST00000393211 PERPQ96FX8 193 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 OR8B2Q96RD0 313 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 ALKBH7Q9BT30 221 aaPredicted RBP8.09□□□□□ -1.11
COL17A1-203ENST00000393211 MRPL20Q9BYC9 149 aaKnown RBP8.09□□□□□ -1.11
COL17A1-203ENST00000393211 C7orf69Q9H7B7 122 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 CBY1Q9Y3M2 126 aa8.09□□□□□ -1.11
COL17A1-203ENST00000393211 TRAV9-2A0A087WT02 112 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 TRAV5A0A0B4J249 113 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 A0A1B0GXF2 115 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 FAM231BA6NCW3 169 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 A6NNC1 897 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 M0R296 226 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 NPSP0C0P6 89 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 CHRNB4P30926 498 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 UBE2G1P62253 170 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 PAX2Q02962 417 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 DUX4L9Q6RFH8 374 aaPredicted RBP8.08□□□□□ -1.12
COL17A1-203ENST00000393211 VHLLQ6RSH7 139 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 PATE2Q6UY27 113 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 Q6ZN92 141 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 ZADH2Q8N4Q0 377 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 OR10X1Q8NGY0 326 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 FAM168AQ92567 244 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 DCAF16Q9NXF7 216 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 ZNF492Q9P255 531 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 EPDR1Q9UM22 224 aa8.08□□□□□ -1.12
COL17A1-203ENST00000393211 RAI1Q7Z5J4 1906 aaPredicted RBP8.08□□□□□ -1.12
COL17A1-203ENST00000393211 IGKV1D-37A0A075B6S9 117 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 FAM181BA6NEQ2 426 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 A8MWL6 223 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 CRYGCP07315 174 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 MC5RP33032 325 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 ZNF137PP52743 207 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 MMDQ15546 238 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 BATFQ16520 125 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 VMA21Q3ZAQ7 101 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 C1orf185Q5T7R7 199 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 MORN5Q5VZ52 161 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 IGF2-ASQ6U949 168 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 IGFL3Q6UXB1 125 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 RBMXL3Q8N7X1 1067 aaKnown RBP8.07□□□□□ -1.12
COL17A1-203ENST00000393211 DEFB108BQ8NET1 73 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 NPIPB3Q92617 1050 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 FMC1Q96HJ9 113 aa8.07□□□□□ -1.12
COL17A1-203ENST00000393211 GPR82Q96P67 336 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms