RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 HLA-DRB1P01911 266 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 DLX6P56179 175 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 IFT22Q9H7X7 185 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 SNAI2O43623 268 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 WISP2O76076 250 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 MEF2CQ06413 473 aaPredicted RBP12.01□□□□□ -0.49
PSME4-201ENST00000389993 Q9H3A6 140 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 CD99P14209 185 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 CNTFRP26992 372 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 IGKV1-5P01602 117 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 SRP19P09132 144 aaKnown RBP12.01□□□□□ -0.49
PSME4-201ENST00000389993 ZNF56Q15929 161 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 OR4C5Q8NGB2 326 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 OR4D5Q8NGN0 318 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 BPESC1Q9GZL8 116 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 CACNA1HO95180 2353 aa12.01□□□□□ -0.49
PSME4-201ENST00000389993 SIAH2O43255 324 aa12□□□□□ -0.49
PSME4-201ENST00000389993 NUDT3O95989 172 aa12□□□□□ -0.49
PSME4-201ENST00000389993 ZNF25P17030 456 aaPredicted RBP12□□□□□ -0.49
PSME4-201ENST00000389993 RHOGP84095 191 aa12□□□□□ -0.49
PSME4-201ENST00000389993 PCDH15Q96QU1 1955 aa12□□□□□ -0.49
PSME4-201ENST00000389993 DENND4AQ7Z401 1863 aa12□□□□□ -0.49
PSME4-201ENST00000389993 IGKV1-16P04430 117 aa12□□□□□ -0.49
PSME4-201ENST00000389993 GZMBP10144 247 aa12□□□□□ -0.49
PSME4-201ENST00000389993 OR1P1Q8NH06 330 aa12□□□□□ -0.49
PSME4-201ENST00000389993 PCNX2A6NKB5 2137 aa12□□□□□ -0.49
PSME4-201ENST00000389993 ELOA3CA0A087WX78 387 aaPredicted RBP12□□□□□ -0.49
PSME4-201ENST00000389993 IGHV1-8P0DP01 117 aa12□□□□□ -0.49
PSME4-201ENST00000389993 FAM71F2Q6NXP2 309 aa12□□□□□ -0.49
PSME4-201ENST00000389993 C1QL4Q86Z23 238 aa12□□□□□ -0.49
PSME4-201ENST00000389993 VPS25Q9BRG1 176 aa12□□□□□ -0.49
PSME4-201ENST00000389993 WNT2P09544 360 aa12□□□□□ -0.49
PSME4-201ENST00000389993 TCF24Q7RTU0 167 aa12□□□□□ -0.49
PSME4-201ENST00000389993 FAM19A2Q8N3H0 131 aa12□□□□□ -0.49
PSME4-201ENST00000389993 DDB2Q92466 427 aa12□□□□□ -0.49
PSME4-201ENST00000389993 MBD3L4A6NDZ8 208 aaPredicted RBP11.99□□□□□ -0.49
PSME4-201ENST00000389993 MBD3L3A6NE82 208 aaPredicted RBP11.99□□□□□ -0.49
PSME4-201ENST00000389993 MBD3L5A6NJ08 208 aaPredicted RBP11.99□□□□□ -0.49
PSME4-201ENST00000389993 MBD3L2Q8NHZ7 208 aaPredicted RBP11.99□□□□□ -0.49
PSME4-201ENST00000389993 PSG9Q00887 426 aa11.99□□□□□ -0.49
PSME4-201ENST00000389993 WDR86Q86TI4 376 aa11.99□□□□□ -0.49
PSME4-201ENST00000389993 ST6GALNAC6Q969X2 333 aa11.99□□□□□ -0.49
PSME4-201ENST00000389993 TRAV30A0A087WSZ9 112 aa11.99□□□□□ -0.49
PSME4-201ENST00000389993 FBLL1A6NHQ2 334 aaKnown RBP11.99□□□□□ -0.49
PSME4-201ENST00000389993 PEX7O00628 323 aa11.99□□□□□ -0.49
PSME4-201ENST00000389993 ASPHD1Q5U4P2 390 aa11.99□□□□□ -0.49
PSME4-201ENST00000389993 ST6GALNAC3Q8NDV1 305 aa11.99□□□□□ -0.49
PSME4-201ENST00000389993 FAM166AQ6J272 317 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 SPRNQ5BIV9 151 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 Q6ZR03 302 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 C19orf35Q6ZS72 473 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 TMEM191AQ9H0A3 160 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 NAPSAO96009 420 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 FBLN7Q53RD9 439 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 ZNF506Q5JVG8 444 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 K7ENP7 123 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 NAT1P18440 290 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 FXYD7P58549 80 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 PSMB2P49721 201 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 HINT1P49773 126 aaPredicted RBP11.98□□□□□ -0.49
PSME4-201ENST00000389993 Q6ZRM9 215 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 DERL1Q9BUN8 251 aa11.98□□□□□ -0.49
PSME4-201ENST00000389993 C7orf71A4D174 169 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 FAM181BA6NEQ2 426 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 IFITM10A6NMD0 228 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 BDP1A6H8Y1 2624 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 IGHG3P01860 377 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 SRSF9Q13242 221 aaKnown RBP eCLIP11.97□□□□□ -0.491e-6■■□□□ 12.6
PSME4-201ENST00000389993 PMCHL1Q16048 86 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 SPATA45Q537H7 98 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 EXOC3-AS1Q8N2X6 119 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 IGHV1-3A0A0C4DH29 117 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.97□□□□□ -0.49
PSME4-201ENST00000389993 HSPB8Q9UJY1 196 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 HTN3P15516 51 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 PSMG3Q9BT73 122 aaPredicted RBP11.97□□□□□ -0.49
PSME4-201ENST00000389993 IGKV1-6A0A0C4DH72 117 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 TCF15Q12870 199 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 LHFPL1Q86WI0 220 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 GPR82Q96P67 336 aa11.97□□□□□ -0.49
PSME4-201ENST00000389993 RSPO1Q2MKA7 263 aaPredicted RBP11.96□□□□□ -0.49
PSME4-201ENST00000389993 PSMB11A5LHX3 300 aa11.96□□□□□ -0.49
PSME4-201ENST00000389993 H3BVH4 76 aa11.96□□□□□ -0.49
PSME4-201ENST00000389993 TNFSF13O75888 250 aa11.96□□□□□ -0.49
PSME4-201ENST00000389993 EIF4E3Q8N5X7 224 aaKnown RBP11.96□□□□□ -0.49
PSME4-201ENST00000389993 MSRB2Q9Y3D2 182 aa11.96□□□□□ -0.49
PSME4-201ENST00000389993 DOCK11Q5JSL3 2073 aa11.96□□□□□ -0.49
PSME4-201ENST00000389993 A0A1W2PNU3 283 aaPredicted RBP11.96□□□□□ -0.5
PSME4-201ENST00000389993 EFNB3Q15768 340 aa11.96□□□□□ -0.5
PSME4-201ENST00000389993 ZNF585BQ52M93 769 aa11.96□□□□□ -0.5
PSME4-201ENST00000389993 PMCHL2Q9BQD1 86 aa11.96□□□□□ -0.5
PSME4-201ENST00000389993 FBLN5Q9UBX5 448 aa11.96□□□□□ -0.5
PSME4-201ENST00000389993 MED13LQ71F56 2210 aa11.96□□□□□ -0.5
PSME4-201ENST00000389993 C3orf36Q3SXR2 165 aa11.96□□□□□ -0.5
PSME4-201ENST00000389993 SCRT1Q9BWW7 348 aa11.96□□□□□ -0.5
PSME4-201ENST00000389993 CA7P43166 264 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 OR1N2Q8NGR9 330 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 RAB37Q96AX2 223 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 MRPL32Q9BYC8 188 aaKnown RBP11.95□□□□□ -0.5
PSME4-201ENST00000389993 RPUSD1Q9UJJ7 312 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms