RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 LEAP2Q969E1 77 aa14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 LINC00479Q96M42 142 aa14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 KALRNO60229 2985 aa14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 MBD3L4A6NDZ8 208 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 MBD3L3A6NE82 208 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 MBD3L5A6NJ08 208 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 MT-CO2P00403 227 aa14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 IGFBP2P18065 325 aa14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 AMMECR1LQ6DCA0 310 aa14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 OR5B3Q8NH48 314 aa14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 MBD3L2Q8NHZ7 208 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 HINT2Q9BX68 163 aa14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 ARL2-SNX15V9GYD0 113 aa14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 OR7C2O60412 319 aa14.46□□□□□ -0.1
SQSTM1-202ENST00000389805 SPACA3Q8IXA5 215 aa14.46□□□□□ -0.1
SQSTM1-202ENST00000389805 GNG12Q9UBI6 72 aa14.46□□□□□ -0.1
SQSTM1-202ENST00000389805 NBASA2RRP1 2371 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 GFRA3O60609 400 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 ZNF134P52741 427 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 UBE2G1P62253 170 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 DUX4L9Q6RFH8 374 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 Q8TCH9 128 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 OR8B2Q96RD0 313 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 MCRIP2Q9BUT9 160 aaKnown RBP14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 NPVFQ9HCQ7 196 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 DSCAMO60469 2012 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 hDV102S1A0JD36 115 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 SPINT2O43291 252 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 CAMPP49913 170 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 MFAP2P55001 183 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 RPL39P5Q59GN2 51 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 SMIM15Q7Z3B0 74 aa14.45□□□□□ -0.1
SQSTM1-202ENST00000389805 TNCP24821 2201 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 SRRM5B3KS81 715 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 CD24P25063 80 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 FAM27E3Q08E93 113 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 IL19Q9UHD0 177 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 LY96Q9Y6Y9 160 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 PRSS46E5RG02 174 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 H0YJW9 148 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 TAX1BP3O14907 124 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 PPBPP02775 128 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 GDF5OSQ5U4N7 250 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 TEPPQ6URK8 271 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 MOB3BQ86TA1 216 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 PNKDQ8N490 385 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 OSTCQ9NRP0 149 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 ZNF355PQ9NSJ1 428 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 APC2O95996 2303 aa14.44□□□□□ -0.1
SQSTM1-202ENST00000389805 MUC21A0A0G2JKD1 596 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 MUC21A0A140T8X8 626 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 REG1AP05451 166 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 MYOD1P15172 320 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 MUC21Q5SSG8 566 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 NUDT10Q8NFP7 164 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 ITLN1Q8WWA0 313 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 PLEKHA3Q9HB20 300 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 ZGRF1Q86YA3 2104 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 GGTLC3B5MD39 225 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 LINC00869P0C866 280 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 VDAC2P45880 294 aaPredicted RBP14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 C1orf229Q6ZS94 237 aaPredicted RBP14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 DEFB108BQ8NET1 73 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 OR2T6Q8NHC8 308 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 H0Y8G0 127 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 IGLV2-8P01709 118 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 NPY1RP25929 384 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 GPR12P47775 334 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 TNFRSF19Q9NS68 423 aa14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 LSM4Q9Y4Z0 139 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-202ENST00000389805 MUC6Q6W4X9 2439 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 C2orf70A6NJV1 201 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 PRR27Q6MZM9 219 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 ZNF841Q6ZN19 808 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 LINC00173Q6ZV60 143 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 OR8B3Q8NGG8 313 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 POLEQ07864 2286 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 SMIM27A0A1W2PRY6 76 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 OR4C46A6NHA9 309 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 M0R1X1 148 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 KLK10O43240 276 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 AREGP15514 252 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 DUTP33316 252 aaKnown RBP14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 LRRC10Q5BKY1 277 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 RBMXL3Q8N7X1 1067 aaKnown RBP14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 OR52E5Q8NH55 327 aa14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 TIMM8BQ9Y5J9 83 aaPredicted RBP14.42□□□□□ -0.1
SQSTM1-202ENST00000389805 IZUMO1RA6ND01 250 aa14.41□□□□□ -0.1
SQSTM1-202ENST00000389805 ISLRO14498 428 aa14.41□□□□□ -0.1
SQSTM1-202ENST00000389805 PKDREJQ9NTG1 2253 aa14.41□□□□□ -0.1
SQSTM1-202ENST00000389805 RIPPLY3P57055 190 aa14.41□□□□□ -0.1
SQSTM1-202ENST00000389805 TBR1Q16650 682 aa14.41□□□□□ -0.1
SQSTM1-202ENST00000389805 TIMM23BQ5SRD1 257 aa14.41□□□□□ -0.1
SQSTM1-202ENST00000389805 TCF19Q9Y242 345 aa14.41□□□□□ -0.1
SQSTM1-202ENST00000389805 TCF15Q12870 199 aa14.4□□□□□ -0.1
SQSTM1-202ENST00000389805 Q6ZS92 163 aa14.4□□□□□ -0.1
SQSTM1-202ENST00000389805 ZNF503Q96F45 646 aa14.4□□□□□ -0.1
SQSTM1-202ENST00000389805 ADH4P08319 380 aa14.4□□□□□ -0.1
SQSTM1-202ENST00000389805 FOXA3P55318 350 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-202ENST00000389805 LOXL3P58215 753 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms