RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 LRTM2Q8N967 370 aa10.79□□□□□ -0.68
PTPRN2-203ENST00000389418 ZNF581Q9P0T4 197 aa10.79□□□□□ -0.68
PTPRN2-203ENST00000389418 PRRC2CQ9Y520 2896 aaKnown RBP10.79□□□□□ -0.68
PTPRN2-203ENST00000389418 K7ENP7 123 aa10.79□□□□□ -0.68
PTPRN2-203ENST00000389418 AMY1AP04745 511 aa10.79□□□□□ -0.68
PTPRN2-203ENST00000389418 IGFL3Q6UXB1 125 aa10.79□□□□□ -0.68
PTPRN2-203ENST00000389418 AP5S1Q9NUS5 200 aa10.79□□□□□ -0.68
PTPRN2-203ENST00000389418 GBF1Q92538 1859 aa10.79□□□□□ -0.68
PTPRN2-203ENST00000389418 TRAV40A0A0B4J280 105 aa10.79□□□□□ -0.68
PTPRN2-203ENST00000389418 MINOS1Q5TGZ0 78 aa10.79□□□□□ -0.68
PTPRN2-203ENST00000389418 TMEM42Q69YG0 159 aa10.79□□□□□ -0.68
PTPRN2-203ENST00000389418 WNT10AQ9GZT5 417 aa10.79□□□□□ -0.68
PTPRN2-203ENST00000389418 MINOS1-NBL1R4GNA1 71 aa10.79□□□□□ -0.68
PTPRN2-203ENST00000389418 IGKV1-27A0A075B6S5 117 aa10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 OR52E5Q8NH55 327 aa10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 ZNF524Q96C55 264 aa10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 C18orf12Q96KH6 178 aa10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 FOXA2Q9Y261 457 aaPredicted RBP10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 WT1P19544 449 aaPredicted RBP10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 OTX1P32242 354 aaPredicted RBP10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 DUTP33316 252 aaKnown RBP10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 ZNF474Q6S9Z5 364 aaPredicted RBP10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 OR8A1Q8NGG7 326 aa10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 VOPP1Q96AW1 172 aa10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 METRNQ9UJH8 293 aa10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 EPG5Q9HCE0 2579 aa10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 FHL1Q13642 323 aa10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 ZNF324BQ6AW86 544 aaPredicted RBP10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 BRD3OSQ6XYD6 125 aa10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 PNRC2Q9NPJ4 139 aaKnown RBP10.78□□□□□ -0.68
PTPRN2-203ENST00000389418 H7C1H1 209 aa10.77□□□□□ -0.68
PTPRN2-203ENST00000389418 HIST1H1AQ02539 215 aaPredicted RBP10.77□□□□□ -0.68
PTPRN2-203ENST00000389418 SRSF9Q13242 221 aaKnown RBP eCLIP10.77□□□□□ -0.681e-6■■■■□ 23.3
PTPRN2-203ENST00000389418 ICAM4Q14773 271 aa10.77□□□□□ -0.68
PTPRN2-203ENST00000389418 Q6AWC8 147 aa10.77□□□□□ -0.68
PTPRN2-203ENST00000389418 PLXNA4Q9HCM2 1894 aa10.77□□□□□ -0.68
PTPRN2-203ENST00000389418 A0A087X0M5 115 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 A0A1B0GX30 115 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 GGCTO75223 188 aaKnown RBP10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 GPR183P32249 361 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 C19orf54Q5BKX5 351 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 COLCA1Q6ZS62 124 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 TMEM70Q9BUB7 260 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 ZNF257Q9Y2Q1 563 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 TMEM178BH3BS89 294 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 UBE2L6O14933 153 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 LDLRAD4O15165 306 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 TAS2R60P59551 318 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 PRCDQ00LT1 54 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 ID3Q02535 119 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 TFF3Q07654 80 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 LBHQ53QV2 105 aaPredicted RBP10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 TMEM219Q86XT9 240 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 ZNF525Q8N782 197 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 TGIF2-C20orf24A0A0A6YYL0 155 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 IGFBP2P18065 325 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 KLRD1Q13241 179 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 SLC50A1Q9BRV3 221 aa10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 SOX21Q9Y651 276 aaPredicted RBP10.77□□□□□ -0.69
PTPRN2-203ENST00000389418 TRBV6-6A0A0A6YYG2 114 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 A6NDN8 102 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 K7EM74 188 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 LINC00205P59089 165 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 ZNF600Q6ZNG1 722 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 A0A1B0GW15 77 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 PSPNO60542 156 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 PMCHL1Q16048 86 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 LHFPL4Q7Z7J7 247 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 LINC00518Q8N0U6 118 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 SFRP2Q96HF1 295 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 B4DSR2 109 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 CENPWQ5EE01 88 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 C10orf55Q5SWW7 151 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 VN1R17PQ8TDU5 208 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 KIR2DL4Q99706 377 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 MUC21A0A0G2JKD1 596 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 MUC21A0A140T8X8 626 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 WNT2P09544 360 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 OR9G9P0C7N8 305 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 C3orf36Q3SXR2 165 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 C2orf83Q53S99 150 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 MUC21Q5SSG8 566 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 Q71RC1 249 aaPredicted RBP10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 CIARTQ8N365 385 aaPredicted RBP10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 PGLYRP4Q96LB8 373 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 PAM16Q9Y3D7 125 aa10.76□□□□□ -0.69
PTPRN2-203ENST00000389418 IFITM10A6NMD0 228 aa10.75□□□□□ -0.69
PTPRN2-203ENST00000389418 BIVMQ86UB2 503 aa10.75□□□□□ -0.69
PTPRN2-203ENST00000389418 MIEN1Q9BRT3 115 aa10.75□□□□□ -0.69
PTPRN2-203ENST00000389418 DIRC3C9JPN6 131 aa10.75□□□□□ -0.69
PTPRN2-203ENST00000389418 M0R1W7 72 aa10.75□□□□□ -0.69
PTPRN2-203ENST00000389418 RAMP3O60896 148 aa10.75□□□□□ -0.69
PTPRN2-203ENST00000389418 FMC1Q96HJ9 113 aa10.75□□□□□ -0.69
PTPRN2-203ENST00000389418 PRB1P04280 392 aa10.75□□□□□ -0.69
PTPRN2-203ENST00000389418 MRPL18Q9H0U6 180 aaKnown RBP10.75□□□□□ -0.69
PTPRN2-203ENST00000389418 CBY3A6NI87 242 aa10.75□□□□□ -0.69
PTPRN2-203ENST00000389418 NAPSAO96009 420 aa10.75□□□□□ -0.69
PTPRN2-203ENST00000389418 HLA-DRB1P01911 266 aa10.75□□□□□ -0.69
PTPRN2-203ENST00000389418 PAX1P15863 534 aa10.75□□□□□ -0.69
PTPRN2-203ENST00000389418 NBL1P41271 181 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms