RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 NPIPB13A6NJU9 1138 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 A8MWP6 167 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 IGHV3-72A0A0B4J1Y9 119 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 FOXL1Q12952 345 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 TMEM249Q2WGJ8 235 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 OCIAD2Q56VL3 154 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 CT55Q8WUE5 264 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 PSMB11A5LHX3 300 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 ATXN8Q156A1 80 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 PRSS53Q2L4Q9 553 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 NPFFR1Q9GZQ6 430 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 ASIPP42127 132 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 ZNF664Q8N3J9 261 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 SRSF1Q07955 248 aaKnown RBP eCLIP10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 TMEM240Q5SV17 173 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 Q9H3A6 140 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 TRAV21A0A0B4J279 112 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 IGHV3-48P01763 117 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 OR52E5Q8NH55 327 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 ADRA2AP08913 450 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 EPDR1Q9UM22 224 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 TNFRSF18Q9Y5U5 241 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 RASL11AQ6T310 242 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 CLEC2AQ6UVW9 174 aa10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 ZNF703Q9H7S9 590 aaPredicted RBP10.51□□□□□ -0.73
SRGAP3-202ENST00000383836 CEACAM4O75871 244 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 HS3ST3B1Q9Y662 390 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 TIMP3P35625 211 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 TMPRSS3P57727 454 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 TEX45Q8NA69 505 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 ZNF815PA8K554 130 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 FOXS1O43638 330 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 ASCL4Q6XD76 172 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 MIR17HGQ75NE6 70 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 RNASEH2CQ8TDP1 164 aaKnown RBP10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 ZNF562Q6V9R5 426 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 SLC25A15Q9Y619 301 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 LOC101059948A0A1B0GTJ6 334 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 PEAR1Q5VY43 1037 aaPredicted RBP10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 TEX38Q6PEX7 206 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 KIR3DL3Q8N743 410 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 CST9LQ9H4G1 147 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 A0A1W2PRE2 83 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 SNRPD3P62318 126 aaKnown RBP10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 ZNF826PQ6ZT77 177 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 IFI27L2Q9H2X8 130 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 SMPXQ9UHP9 88 aa10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 CHTOPQ9Y3Y2 248 aaKnown RBP10.5□□□□□ -0.73
SRGAP3-202ENST00000383836 IGKV3OR2-268A0A0C4DH90 116 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 TNFRSF6BO95407 300 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 A0A087X0K7 114 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 A0A0J9YW62 118 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 PPBPP02775 128 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 MPZP25189 248 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 Q6ZS52 159 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 PLSCR4Q9NRQ2 329 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 ERG28Q9UKR5 140 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 C2CD4DB7Z1M9 353 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 CACNG8Q8WXS5 425 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 NPPCP23582 126 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 IFI27L1Q96BM0 104 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 MUC21A0A0G2JKD1 596 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 MUC21A0A140T8X8 626 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 PRTN3P24158 256 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 MUC21Q5SSG8 566 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 LEAP2Q969E1 77 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 SLC25A20O43772 301 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 KIR3DS1Q14943 382 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 OCC1Q8TAD7 63 aa10.49□□□□□ -0.73
SRGAP3-202ENST00000383836 ACACBO00763 2458 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 ATG2AQ2TAZ0 1938 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 LHFPL4Q7Z7J7 247 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 BCL6BQ8N143 479 aaPredicted RBP10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 TRAV2A0A0B4J234 112 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 PF4P02776 101 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 LHX8Q68G74 356 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 CCL8P80075 99 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 CITED2Q99967 270 aaPredicted RBP10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 SONP18583 2426 aaKnown RBP10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 IGKV1D-42A0A075B6H8 117 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 M0R2P5 195 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 ORMDL2Q53FV1 153 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 ZNF71Q9NQZ8 489 aaPredicted RBP10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 CSRP3P50461 194 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 ATP5G2Q06055 141 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 GUSBP1Q15486 140 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 MPV17L2Q567V2 206 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 TSKUQ8WUA8 353 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 OR5P3Q8WZ94 311 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 PLA2G2FQ9BZM2 168 aa10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 TNS1Q9HBL0 1735 aaKnown RBP10.48□□□□□ -0.73
SRGAP3-202ENST00000383836 TRAV1-1A0A0B4J248 108 aa10.47□□□□□ -0.73
SRGAP3-202ENST00000383836 GGTLC3B5MD39 225 aa10.47□□□□□ -0.73
SRGAP3-202ENST00000383836 C1QL2Q7Z5L3 287 aa10.47□□□□□ -0.73
SRGAP3-202ENST00000383836 EEF1AKMT3Q96AZ1 226 aa10.47□□□□□ -0.73
SRGAP3-202ENST00000383836 RAX2Q96IS3 184 aa10.47□□□□□ -0.73
SRGAP3-202ENST00000383836 C21orf140B9A014 251 aa10.47□□□□□ -0.73
SRGAP3-202ENST00000383836 OTORQ9NRC9 128 aa10.47□□□□□ -0.73
SRGAP3-202ENST00000383836 TSPAN7P41732 249 aa10.47□□□□□ -0.73
SRGAP3-202ENST00000383836 GAGE1Q13065 139 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms