RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 K7ERU9 68 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 GNG5P63218 68 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 VWC2Q2TAL6 325 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 TMEM116Q8NCL8 245 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 SAP30LQ9HAJ7 183 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 TNFRSF19Q9NS68 423 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 AGFG2O95081 481 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 LEPROTL1O95214 131 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 TOMM40O96008 361 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 ERVK11-1P61568 191 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 SPOCK3Q9BQ16 436 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 TRAV9-1A0A075B6T8 112 aa11.35□□□□□ -0.59
SDC1-202ENST00000381150 C9JCJ5 164 aa11.35□□□□□ -0.59
SDC1-202ENST00000381150 TIMM8AO60220 97 aaPredicted RBP11.35□□□□□ -0.59
SDC1-202ENST00000381150 WT1P19544 449 aaPredicted RBP11.35□□□□□ -0.59
SDC1-202ENST00000381150 PSG9Q00887 426 aa11.35□□□□□ -0.59
SDC1-202ENST00000381150 Q8IYB0 196 aa11.35□□□□□ -0.59
SDC1-202ENST00000381150 OR9G1Q8NH87 305 aa11.35□□□□□ -0.59
SDC1-202ENST00000381150 CHRDL1Q9BU40 450 aa11.35□□□□□ -0.59
SDC1-202ENST00000381150 SMPD2O60906 423 aa11.35□□□□□ -0.59
SDC1-202ENST00000381150 TMEM11P17152 192 aa11.35□□□□□ -0.59
SDC1-202ENST00000381150 IGFL2Q6UWQ7 119 aa11.35□□□□□ -0.59
SDC1-202ENST00000381150 FDCSPQ8NFU4 85 aa11.35□□□□□ -0.59
SDC1-202ENST00000381150 OR4F17Q8NGA8 305 aa11.35□□□□□ -0.59
SDC1-202ENST00000381150 ADGRG4Q8IZF6 3080 aa11.35□□□□□ -0.59
SDC1-202ENST00000381150 J3QW42 95 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 DUTP33316 252 aaKnown RBP11.34□□□□□ -0.59
SDC1-202ENST00000381150 MRPL49Q13405 166 aaKnown RBP11.34□□□□□ -0.59
SDC1-202ENST00000381150 MUC15Q8N387 334 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 NUP35Q8NFH5 326 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 PGLYRP4Q96LB8 373 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 TMEM167BQ9NRX6 74 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 HILPDAQ9Y5L2 63 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 DMXL1Q9Y485 3027 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 IZUMO1RA6ND01 250 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 GAGE10A6NGK3 116 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 SNRNP40Q96DI7 357 aaKnown RBP11.34□□□□□ -0.59
SDC1-202ENST00000381150 OSTCQ9NRP0 149 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 TAX1BP3O14907 124 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 P0C879 139 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 MPV17P39210 176 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 DEFB108BQ8NET1 73 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 Q8TCH9 128 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 CORO2AQ92828 525 aa11.34□□□□□ -0.59
SDC1-202ENST00000381150 AMMECR1Q9Y4X0 333 aaPredicted RBP11.34□□□□□ -0.59
SDC1-202ENST00000381150 WNK2Q9Y3S1 2297 aa11.33□□□□□ -0.59
SDC1-202ENST00000381150 GDF5OSQ5U4N7 250 aa11.33□□□□□ -0.6
SDC1-202ENST00000381150 ZNRF1Q8ND25 227 aa11.33□□□□□ -0.6
SDC1-202ENST00000381150 GSX1Q9H4S2 264 aaPredicted RBP11.33□□□□□ -0.6
SDC1-202ENST00000381150 MGAQ8IWI9 3026 aa11.33□□□□□ -0.6
SDC1-202ENST00000381150 OTOGLQ3ZCN5 2332 aa11.33□□□□□ -0.6
SDC1-202ENST00000381150 TRAV8-6A0A0B4J262 113 aa11.33□□□□□ -0.6
SDC1-202ENST00000381150 APELAP0DMC3 54 aa11.33□□□□□ -0.6
SDC1-202ENST00000381150 UTF1Q5T230 341 aa11.33□□□□□ -0.6
SDC1-202ENST00000381150 CNEP1R1Q8N9A8 125 aa11.33□□□□□ -0.6
SDC1-202ENST00000381150 SARAFQ96BY9 339 aa11.33□□□□□ -0.6
SDC1-202ENST00000381150 CCL11P51671 97 aa11.33□□□□□ -0.6
SDC1-202ENST00000381150 TAS2R45P59539 299 aa11.33□□□□□ -0.6
SDC1-202ENST00000381150 MORN5Q5VZ52 161 aa11.33□□□□□ -0.6
SDC1-202ENST00000381150 RND1Q92730 232 aa11.33□□□□□ -0.6
SDC1-202ENST00000381150 PIEZO2Q9H5I5 2752 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 PROP1O75360 226 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 FTH1P19P0C7X4 201 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 AREGP15514 252 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 ZNF146Q15072 292 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 TM4SF20Q53R12 229 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 FAM214BQ7L5A3 538 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 PNKDQ8N490 385 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 DEFB124Q8NES8 71 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 HCFC1P51610 2035 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 SPAARA0A1B0GVQ0 90 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 J3QR06 171 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 ISLRO14498 428 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 LRRC10Q5BKY1 277 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 Q5PR19 223 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 BVES-AS1Q5T3Y7 98 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 SLC35E4Q6ICL7 350 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 Q6ZT83 130 aa11.32□□□□□ -0.6
SDC1-202ENST00000381150 CHEK1O14757 476 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 KIR2DL2P43627 348 aaPredicted RBP11.31□□□□□ -0.6
SDC1-202ENST00000381150 LRRC29Q8WV35 223 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 INTS1Q8N201 2190 aaKnown RBP11.31□□□□□ -0.6
SDC1-202ENST00000381150 DYSFO75923 2080 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 C7orf71A4D174 169 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 IQCF6A8MYZ5 107 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 VDAC2P45880 294 aaPredicted RBP11.31□□□□□ -0.6
SDC1-202ENST00000381150 TBR1Q16650 682 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 FAM201AQ5SY85 155 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 ASCL2Q99929 193 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 TMEM191AQ9H0A3 160 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 CSTL1Q9H114 145 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 IGHV3-21A0A0B4J1V1 117 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.31□□□□□ -0.6
SDC1-202ENST00000381150 ORM2P19652 201 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 RPL24P83731 157 aaKnown RBP11.31□□□□□ -0.6
SDC1-202ENST00000381150 CLEC2AQ6UVW9 174 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 WDR31Q8NA23 367 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 OR10W1Q8NGF6 305 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 C1orf159Q96HA4 380 aa11.31□□□□□ -0.6
SDC1-202ENST00000381150 OR2V2Q96R30 315 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms