RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 KIF13BQ9NQT8 1826 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 RPL32P62910 135 aaKnown RBP4.06□□□□□ -1.76
PCDH9-201ENST00000377861 RTN4RQ9BZR6 473 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 LY75O60449 1722 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 SAMD5Q5TGI4 173 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 ZNF833PQ6ZTB9 187 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 TGFBR3LH3BV60 316 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 EFNA2O43921 213 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 OR13A1Q8NGR1 328 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 A0A1B0GV50 99 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 HES1Q14469 280 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 LAGE3Q14657 143 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 SRSF12Q8WXF0 261 aaKnown RBP4.06□□□□□ -1.76
PCDH9-201ENST00000377861 AHCTF1Q8WYP5 2266 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 ANOS1P23352 680 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 RTP5Q14D33 572 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 DKK4Q9UBT3 224 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 M0R1B8 84 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 HSPB6O14558 160 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 RRHO14718 337 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 IGKV1-5P01602 117 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 UQCRFS1P47985 274 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 C9orf152Q5JTZ5 239 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 HIST1H4GQ99525 98 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 FAM157AC9JC47 383 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 SMIM20Q8N5G0 67 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 RHODO00212 210 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 MED14OSP0DP75 135 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 GFRALQ6UXV0 394 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 FOXQ1Q9C009 403 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 KIAA0100Q14667 2235 aaKnown RBP4.06□□□□□ -1.76
PCDH9-201ENST00000377861 CEACAM8P31997 349 aaPredicted RBP4.06□□□□□ -1.76
PCDH9-201ENST00000377861 COX8CQ7Z4L0 72 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 BATF2Q8N1L9 274 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 SPRY3O43610 288 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 CDCP2Q5VXM1 449 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 C11orf42Q8N5U0 333 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 FAM103A1Q9BTL3 118 aaKnown RBP4.06□□□□□ -1.76
PCDH9-201ENST00000377861 GTSF1LQ9H1H1 148 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 FOXJ2Q9P0K8 574 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 OR11H6Q8NGC7 330 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 A0A0J9YXY3 114 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 FXYD3Q14802 87 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 STRCP1A6NGW2 1772 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 SCN1AP35498 2009 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 MUC15Q8N387 334 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 LIME1Q9H400 295 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 LTBP1Q14766 1721 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 SPEM2Q0P670 501 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 DEFB119Q8N690 84 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 IGHV2-26A0A0B4J1V2 119 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 MIC13Q5XKP0 118 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 FAM159AQ6UWV7 190 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 SHANK2-AS3Q9BTD1 123 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 PAM16Q9Y3D7 125 aa4.06□□□□□ -1.76
PCDH9-201ENST00000377861 COX8AP10176 69 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 LOXL3P58215 753 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 SSMEM1Q8WWF3 244 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 LINC01619G3V211 115 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 DKK1O94907 266 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 FTH1P19P0C7X4 201 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 ZNF138P52744 262 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 ZNF319Q9P2F9 582 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 C17orf98A8MV24 154 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 SIGLEC9Q9Y336 463 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 J3QLI3 93 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 SH2D6Q7Z4S9 175 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 ZNF784Q8NCA9 323 aaPredicted RBP4.05□□□□□ -1.76
PCDH9-201ENST00000377861 SRXN1Q9BYN0 137 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 DOCK1Q14185 1865 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 FGF8P55075 233 aaPredicted RBP4.05□□□□□ -1.76
PCDH9-201ENST00000377861 M0R2P5 195 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 MDKP21741 143 aaPredicted RBP4.05□□□□□ -1.76
PCDH9-201ENST00000377861 C18orf32Q8TCD1 76 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 GNB4Q9HAV0 340 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 C20orf204Q6ZNR8 217 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 IGHV2-70DA0A0C4DH43 119 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 CCL4P13236 92 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 IL17BQ9UHF5 180 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 SHISA7A6NL88 538 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 EDN3P14138 238 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 UBE2E1P51965 193 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 SLC25A15Q9Y619 301 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 TNXAQ16473 311 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 FBXL19-AS1Q494R0 122 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 AJUBAQ96IF1 538 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 GON4LQ3T8J9 2241 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 TRAV12-1A0A0B4J245 112 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 KLK2P20151 261 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 C1QTNF4Q9BXJ3 329 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 RGPD3A6NKT7 1758 aaPredicted RBP4.05□□□□□ -1.76
PCDH9-201ENST00000377861 RGPD4Q7Z3J3 1758 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 CABIN1Q9Y6J0 2220 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 DMRTA2Q96SC8 542 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 AKIRIN1Q9H9L7 192 aaPredicted RBP4.05□□□□□ -1.76
PCDH9-201ENST00000377861 M0QXV9 152 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 PRSS22Q9GZN4 317 aa4.05□□□□□ -1.76
PCDH9-201ENST00000377861 TMEM50AO95807 157 aa4.04□□□□□ -1.76
PCDH9-201ENST00000377861 LEPP41159 167 aa4.04□□□□□ -1.76
PCDH9-201ENST00000377861 CGAP01215 116 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms