RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 CMTM2Q8TAZ6 248 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 WFIKKN1Q96NZ8 548 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 NDUFAF3Q9BU61 184 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 DMXL1Q9Y485 3027 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 GRIFINA4D1Z8 144 aa9.46□□□□□ -0.89
TNFRSF9-201ENST00000377507 E7EQL1 145 aa9.46□□□□□ -0.89
TNFRSF9-201ENST00000377507 FCN1O00602 326 aa9.46□□□□□ -0.89
TNFRSF9-201ENST00000377507 MT-ND6P03923 174 aa9.46□□□□□ -0.89
TNFRSF9-201ENST00000377507 IER3P46695 156 aa9.46□□□□□ -0.89
TNFRSF9-201ENST00000377507 RPL19P84098 196 aaKnown RBP9.46□□□□□ -0.89
TNFRSF9-201ENST00000377507 C10orf55Q5SWW7 151 aa9.46□□□□□ -0.89
TNFRSF9-201ENST00000377507 TGIF2LXQ8IUE1 241 aa9.46□□□□□ -0.89
TNFRSF9-201ENST00000377507 NPIPB3Q92617 1050 aa9.46□□□□□ -0.89
TNFRSF9-201ENST00000377507 MS4A10Q96PG2 267 aa9.46□□□□□ -0.89
TNFRSF9-201ENST00000377507 RNASE7Q9H1E1 156 aaKnown RBP9.46□□□□□ -0.89
TNFRSF9-201ENST00000377507 BOD1L1Q8NFC6 3051 aa9.46□□□□□ -0.89
TNFRSF9-201ENST00000377507 A0A1W2PPI3 338 aa9.46□□□□□ -0.9
TNFRSF9-201ENST00000377507 SNURFLB1AK76 121 aa9.46□□□□□ -0.9
TNFRSF9-201ENST00000377507 NBL1P41271 181 aa9.46□□□□□ -0.9
TNFRSF9-201ENST00000377507 UBE2L3P68036 154 aaKnown RBP9.46□□□□□ -0.9
TNFRSF9-201ENST00000377507 VMA21Q3ZAQ7 101 aa9.46□□□□□ -0.9
TNFRSF9-201ENST00000377507 C10orf113Q5VZT2 155 aa9.46□□□□□ -0.9
TNFRSF9-201ENST00000377507 WDR73Q6P4I2 378 aa9.46□□□□□ -0.9
TNFRSF9-201ENST00000377507 TEX45Q8NA69 505 aa9.46□□□□□ -0.9
TNFRSF9-201ENST00000377507 OR5AU1Q8NGC0 362 aa9.46□□□□□ -0.9
TNFRSF9-201ENST00000377507 TNFRSF14Q92956 283 aa9.46□□□□□ -0.9
TNFRSF9-201ENST00000377507 RITA1Q96K30 269 aa9.46□□□□□ -0.9
TNFRSF9-201ENST00000377507 NGBQ9NPG2 151 aa9.46□□□□□ -0.9
TNFRSF9-201ENST00000377507 ZNF355PQ9NSJ1 428 aa9.46□□□□□ -0.9
TNFRSF9-201ENST00000377507 CUL9Q8IWT3 2517 aa9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 IGLC7A0M8Q6 106 aa9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 COX7A2P2O60397 106 aa9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 CRYGBP07316 175 aa9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 MYCNOSP40205 109 aa9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 RANP62826 216 aaKnown RBP9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 PAX2Q02962 417 aa9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 C1orf194Q5T5A4 169 aa9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 TMEM136Q6ZRR5 245 aa9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 FAM231DQ6ZW35 169 aa9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 FXYD5Q96DB9 178 aa9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 C2orf88Q9BSF0 95 aa9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 TMEM133Q9H2Q1 129 aa9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 MRPL36Q9P0J6 103 aaKnown RBP9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 NAGKQ9UJ70 344 aa9.45□□□□□ -0.9
TNFRSF9-201ENST00000377507 SLC25A17O43808 307 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 SERF1AO75920 110 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 TPPP2P59282 170 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 BPIFB3P59826 476 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 IBA57Q5T440 356 aaKnown RBP9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 ZNF329Q86UD4 541 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 PAXXQ9BUH6 204 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 AMMECR1Q9Y4X0 333 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 BSNQ9UPA5 3926 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 KIR2DL5BA0A0G2JN68 375 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 KIR2DL5BA0A0G2JPC4 375 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 SCGB1D1O95968 90 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 ETFRF1Q6IPR1 90 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 ZNF600Q6ZNG1 722 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 Q6ZWC4 215 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 KIR2DL5AQ8N109 375 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 MBD6Q96DN6 1003 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 DYNLRB1Q9NP97 96 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 TPSG1Q9NRR2 321 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 POLR3KQ9Y2Y1 108 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 LAMA5O15230 3695 aa9.44□□□□□ -0.9
TNFRSF9-201ENST00000377507 ZNF292O60281 2723 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 IGHV1-69-2A0A0G2JMI3 117 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 C22orf46C9J442 243 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 IGLV1-47P01700 117 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 PYYP10082 97 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 APOBEC3AP31941 199 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 FXYD3Q14802 87 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 OR10J3Q5JRS4 329 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 TMEM116Q8NCL8 245 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 STXBP6Q8NFX7 210 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 TRGV9Q99603 122 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 SH3BGRL2Q9UJC5 107 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 IZUMO1RA6ND01 250 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 B9A039 149 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 AMY1AP04745 511 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 MFAP2P55001 183 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 CASP6P55212 293 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 RASL11AQ6T310 242 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 LINC00305Q7Z4B0 112 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 WIPF2Q8TF74 440 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 LINC00479Q96M42 142 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 GNB4Q9HAV0 340 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 NAT8BQ9UHF3 227 aa9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 RALYQ9UKM9 306 aaKnown RBP9.43□□□□□ -0.9
TNFRSF9-201ENST00000377507 MGAQ8IWI9 3026 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 A0A1B0GV90 55 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 F2Z2F3 143 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 PEX7O00628 323 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 HLA-DQA1P01909 254 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 MGST1P10620 155 aaKnown RBP9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 TBR1Q16650 682 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 TPTE2P1Q5T6R2 138 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 RUSC1-AS1Q66K80 236 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 ZNF841Q6ZN19 808 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 BAGE3Q86Y29 109 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms