RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 CHEK1O14757 476 aa12.79□□□□□ -0.36
USP11-202ENST00000377078 HTR2BP41595 481 aa12.79□□□□□ -0.36
USP11-202ENST00000377078 AP3S2P59780 193 aa12.79□□□□□ -0.36
USP11-202ENST00000377078 SELENOHQ8IZQ5 122 aaKnown RBP12.79□□□□□ -0.36
USP11-202ENST00000377078 RNF2Q99496 336 aa12.79□□□□□ -0.36
USP11-202ENST00000377078 TMEM231Q9H6L2 316 aa12.79□□□□□ -0.36
USP11-202ENST00000377078 CACNG5Q9UF02 275 aa12.79□□□□□ -0.36
USP11-202ENST00000377078 UBQLN2Q9UHD9 624 aa12.79□□□□□ -0.36
USP11-202ENST00000377078 A0A0G2JRQ6 117 aa12.78□□□□□ -0.36
USP11-202ENST00000377078 ANXA3P12429 323 aa12.78□□□□□ -0.36
USP11-202ENST00000377078 S100A5P33763 92 aa12.78□□□□□ -0.36
USP11-202ENST00000377078 AARDQ4LEZ3 155 aa12.78□□□□□ -0.36
USP11-202ENST00000377078 PVRIGQ6DKI7 326 aa12.78□□□□□ -0.36
USP11-202ENST00000377078 TOMM20LQ6UXN7 152 aa12.78□□□□□ -0.36
USP11-202ENST00000377078 NOXA1Q86UR1 476 aa12.78□□□□□ -0.36
USP11-202ENST00000377078 IL22RA2Q969J5 263 aa12.78□□□□□ -0.36
USP11-202ENST00000377078 TMEM56-RWDD3S4R434 201 aa12.78□□□□□ -0.36
USP11-202ENST00000377078 RYR3Q15413 4870 aa12.78□□□□□ -0.36
USP11-202ENST00000377078 IGHV3-49A0A0A0MS15 119 aa12.77□□□□□ -0.37
USP11-202ENST00000377078 CEBPZOSA8MTT3 80 aa12.77□□□□□ -0.37
USP11-202ENST00000377078 UBE2CO00762 179 aa12.77□□□□□ -0.37
USP11-202ENST00000377078 SRPXP78539 464 aa12.77□□□□□ -0.37
USP11-202ENST00000377078 Q6ZRM9 215 aa12.77□□□□□ -0.37
USP11-202ENST00000377078 OR4X1Q8NH49 305 aa12.77□□□□□ -0.37
USP11-202ENST00000377078 LHFPL5Q8TAF8 219 aa12.77□□□□□ -0.37
USP11-202ENST00000377078 GALNT14Q96FL9 552 aa12.77□□□□□ -0.37
USP11-202ENST00000377078 NARS2Q96I59 477 aaKnown RBP12.77□□□□□ -0.37
USP11-202ENST00000377078 PUS1Q9Y606 427 aaKnown RBP eCLIP12.77□□□□□ -0.37
USP11-202ENST00000377078 CSMD3Q7Z407 3707 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 TRAV30A0A087WSZ9 112 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 KIR2DL5BA0A0G2JN68 375 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 KIR2DL5BA0A0G2JPC4 375 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 CLN5O75503 358 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 TMEM50AO95807 157 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 SULT1A3P0DMM9 295 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 SULT1A4P0DMN0 295 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 ODF3L2Q3SX64 289 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 PYDC2Q56P42 97 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 Q6ZWC4 215 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 KIR2DL5AQ8N109 375 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 STPG3Q8N7X2 389 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 KIR2DL5BQ8NHK3 375 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 GPR146Q96CH1 333 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 SOSTQ9BQB4 213 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 TP53TG1Q9Y2A0 90 aa12.76□□□□□ -0.37
USP11-202ENST00000377078 DYNC2H1Q8NCM8 4307 aaKnown RBP12.75□□□□□ -0.37
USP11-202ENST00000377078 IGKV3-7A0A075B6H7 116 aa12.75□□□□□ -0.37
USP11-202ENST00000377078 A0A1W2PS18 150 aa12.75□□□□□ -0.37
USP11-202ENST00000377078 AKR1C4P17516 323 aa12.75□□□□□ -0.37
USP11-202ENST00000377078 TFPI2P48307 235 aa12.75□□□□□ -0.37
USP11-202ENST00000377078 RPL11P62913 178 aaKnown RBP12.75□□□□□ -0.37
USP11-202ENST00000377078 BSXQ3C1V8 233 aa12.75□□□□□ -0.37
USP11-202ENST00000377078 TCF24Q7RTU0 167 aa12.75□□□□□ -0.37
USP11-202ENST00000377078 SLC24A4Q8NFF2 622 aa12.75□□□□□ -0.37
USP11-202ENST00000377078 RNASEH2CQ8TDP1 164 aaKnown RBP12.75□□□□□ -0.37
USP11-202ENST00000377078 TMEM230Q96A57 120 aa12.75□□□□□ -0.37
USP11-202ENST00000377078 METTL26Q96S19 204 aa12.75□□□□□ -0.37
USP11-202ENST00000377078 IGHV3OR16-13A0A075B7E8 117 aa12.74□□□□□ -0.37
USP11-202ENST00000377078 IGHV3-74A0A0B4J1X5 117 aa12.74□□□□□ -0.37
USP11-202ENST00000377078 A0A0B4J2A0 478 aa12.74□□□□□ -0.37
USP11-202ENST00000377078 DNASE2O00115 360 aaPredicted RBP12.74□□□□□ -0.37
USP11-202ENST00000377078 SLC25A4P12235 298 aa12.74□□□□□ -0.37
USP11-202ENST00000377078 NPPCP23582 126 aa12.74□□□□□ -0.37
USP11-202ENST00000377078 TMEM187Q14656 261 aa12.74□□□□□ -0.37
USP11-202ENST00000377078 C2orf83Q53S99 150 aa12.74□□□□□ -0.37
USP11-202ENST00000377078 ETFRF1Q6IPR1 90 aa12.74□□□□□ -0.37
USP11-202ENST00000377078 LGI3Q8N145 548 aa12.74□□□□□ -0.37
USP11-202ENST00000377078 TOMM5Q8N4H5 51 aa12.74□□□□□ -0.37
USP11-202ENST00000377078 OVOL2Q9BRP0 275 aa12.74□□□□□ -0.37
USP11-202ENST00000377078 ZFAND3Q9H8U3 227 aa12.74□□□□□ -0.37
USP11-202ENST00000377078 SHPKQ9UHJ6 478 aa12.74□□□□□ -0.37
USP11-202ENST00000377078 SPRY2O43597 315 aa12.73□□□□□ -0.37
USP11-202ENST00000377078 RPL35AP18077 110 aaKnown RBP12.73□□□□□ -0.37
USP11-202ENST00000377078 CCR6P51684 374 aa12.73□□□□□ -0.37
USP11-202ENST00000377078 DEDD2Q8WXF8 326 aa12.73□□□□□ -0.37
USP11-202ENST00000377078 ST8SIA2Q92186 375 aa12.73□□□□□ -0.37
USP11-202ENST00000377078 GRAMD2BQ96HH9 432 aa12.73□□□□□ -0.37
USP11-202ENST00000377078 ZNF414Q96IQ9 312 aa12.73□□□□□ -0.37
USP11-202ENST00000377078 FNDC4Q9H6D8 234 aaPredicted RBP12.73□□□□□ -0.37
USP11-202ENST00000377078 VSIRQ9H7M9 311 aa12.73□□□□□ -0.37
USP11-202ENST00000377078 STARD9Q9P2P6 4700 aa12.73□□□□□ -0.37
USP11-202ENST00000377078 LCE6AA0A183 80 aa12.72□□□□□ -0.37
USP11-202ENST00000377078 A0A1B0GU03 582 aa12.72□□□□□ -0.37
USP11-202ENST00000377078 NPY1RP25929 384 aa12.72□□□□□ -0.37
USP11-202ENST00000377078 EIF2B2P49770 351 aaKnown RBP12.72□□□□□ -0.37
USP11-202ENST00000377078 SMCO1Q147U7 214 aa12.72□□□□□ -0.37
USP11-202ENST00000377078 DEFB135Q30KP9 77 aa12.72□□□□□ -0.37
USP11-202ENST00000377078 FAM90A2PQ658T7 463 aa12.72□□□□□ -0.37
USP11-202ENST00000377078 GBGT1Q8N5D6 347 aa12.72□□□□□ -0.37
USP11-202ENST00000377078 OR1S2Q8NGQ3 325 aa12.72□□□□□ -0.37
USP11-202ENST00000377078 LYSTQ99698 3801 aa12.71□□□□□ -0.37
USP11-202ENST00000377078 TRAV2A0A0B4J234 112 aa12.71□□□□□ -0.37
USP11-202ENST00000377078 DFFBO76075 338 aa12.71□□□□□ -0.37
USP11-202ENST00000377078 JTBO76095 146 aa12.71□□□□□ -0.37
USP11-202ENST00000377078 NXPH3O95157 252 aa12.71□□□□□ -0.37
USP11-202ENST00000377078 IFNA10P01566 189 aa12.71□□□□□ -0.37
USP11-202ENST00000377078 TNFRSF9Q07011 255 aa12.71□□□□□ -0.37
USP11-202ENST00000377078 KLF9Q13886 244 aaPredicted RBP12.71□□□□□ -0.37
USP11-202ENST00000377078 NMSQ5H8A3 153 aa12.71□□□□□ -0.37
USP11-202ENST00000377078 SPANXN2Q5MJ10 180 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms