RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ARL2-SNX15V9GYD0 113 aa16.24■□□□□ 0.19
VSX1-202ENST00000376709 APELAP0DMC3 54 aa16.24■□□□□ 0.19
VSX1-202ENST00000376709 SRP14P37108 136 aaKnown RBP16.24■□□□□ 0.19
VSX1-202ENST00000376709 OR10J4P0C629 311 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 GNLYP22749 145 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 PDZD11Q5EBL8 140 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 PPP1R27Q86WC6 154 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 LY6G5BQ8NDX9 201 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 OR2T10Q8NGZ9 312 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 MISP3Q96FF7 219 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 SFRP2Q96HF1 295 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 SLC25A33Q9BSK2 321 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 MRPL32Q9BYC8 188 aaKnown RBP16.23■□□□□ 0.19
VSX1-202ENST00000376709 MDFIC2A0A1B0GVS7 189 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 PPP1R2P9O14990 202 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 CRYGBP07316 175 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 C8orf88P0DMB2 117 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 AREGP15514 252 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 HNF1AP20823 631 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 COMPP49747 757 aaPredicted RBP16.23■□□□□ 0.19
VSX1-202ENST00000376709 ZNF503Q96F45 646 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 DNAJC4Q9NNZ3 241 aa16.23■□□□□ 0.19
VSX1-202ENST00000376709 CFAP46Q8IYW2 2715 aa16.22■□□□□ 0.19
VSX1-202ENST00000376709 TCRBV4S1A1TA0A5B7 111 aa16.22■□□□□ 0.19
VSX1-202ENST00000376709 COX7A2P2O60397 106 aa16.22■□□□□ 0.19
VSX1-202ENST00000376709 ARF6P62330 175 aa16.22■□□□□ 0.19
VSX1-202ENST00000376709 ZNF90Q03938 601 aa16.22■□□□□ 0.19
VSX1-202ENST00000376709 C11orf52Q96A22 123 aa16.22■□□□□ 0.19
VSX1-202ENST00000376709 RNF2Q99496 336 aa16.22■□□□□ 0.19
VSX1-202ENST00000376709 ETFRF1Q6IPR1 90 aa16.21■□□□□ 0.19
VSX1-202ENST00000376709 OR4X1Q8NH49 305 aa16.21■□□□□ 0.19
VSX1-202ENST00000376709 OCC1Q8TAD7 63 aa16.21■□□□□ 0.19
VSX1-202ENST00000376709 PFDN5Q99471 154 aa16.21■□□□□ 0.19
VSX1-202ENST00000376709 PSMB11A5LHX3 300 aa16.21■□□□□ 0.19
VSX1-202ENST00000376709 PLGLAQ15195 96 aa16.21■□□□□ 0.19
VSX1-202ENST00000376709 SSBP3Q9BWW4 388 aaPredicted RBP16.21■□□□□ 0.19
VSX1-202ENST00000376709 CHODLQ9H9P2 273 aa16.21■□□□□ 0.19
VSX1-202ENST00000376709 GAR1Q9NY12 217 aaKnown RBP16.21■□□□□ 0.19
VSX1-202ENST00000376709 MRPL36Q9P0J6 103 aaKnown RBP16.21■□□□□ 0.19
VSX1-202ENST00000376709 ARHGAP32A7KAX9 2087 aa16.21■□□□□ 0.18
VSX1-202ENST00000376709 GGCTO75223 188 aaKnown RBP16.2■□□□□ 0.18
VSX1-202ENST00000376709 BPIFB3P59826 476 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 SELENOTP62341 195 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 S100A12P80511 92 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 HIST3H2BBQ8N257 126 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 THAP8Q8NA92 274 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 OR1L4Q8NGR5 311 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 ITLN2Q8WWU7 325 aaPredicted RBP16.2■□□□□ 0.18
VSX1-202ENST00000376709 C22orf15Q8WYQ4 148 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 GPR61Q9BZJ8 451 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 FBXL15Q9H469 300 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 IGKV1D-37A0A075B6S9 117 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 A0A1W2PPR1 153 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 LY6LH3BQJ8 138 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 HTR1DP28221 377 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 S100A2P29034 98 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 FAM3BP58499 235 aaPredicted RBP16.2■□□□□ 0.18
VSX1-202ENST00000376709 C10orf113Q5VZT2 155 aa16.2■□□□□ 0.18
VSX1-202ENST00000376709 LOC105371242A0A075B767 164 aa16.19■□□□□ 0.18
VSX1-202ENST00000376709 UBE2L3P68036 154 aaKnown RBP16.19■□□□□ 0.18
VSX1-202ENST00000376709 MORN5Q5VZ52 161 aa16.19■□□□□ 0.18
VSX1-202ENST00000376709 SLC25A2Q9BXI2 301 aa16.19■□□□□ 0.18
VSX1-202ENST00000376709 TRAV5A0A0B4J249 113 aa16.19■□□□□ 0.18
VSX1-202ENST00000376709 TIMM23O14925 209 aa16.19■□□□□ 0.18
VSX1-202ENST00000376709 CRYBB3P26998 211 aa16.19■□□□□ 0.18
VSX1-202ENST00000376709 C19orf35Q6ZS72 473 aa16.19■□□□□ 0.18
VSX1-202ENST00000376709 OR5AU1Q8NGC0 362 aa16.19■□□□□ 0.18
VSX1-202ENST00000376709 ELOA3CA0A087WX78 387 aaPredicted RBP16.18■□□□□ 0.18
VSX1-202ENST00000376709 C9JCJ5 164 aa16.18■□□□□ 0.18
VSX1-202ENST00000376709 MFAP2P55001 183 aa16.18■□□□□ 0.18
VSX1-202ENST00000376709 TPTE2P1Q5T6R2 138 aa16.18■□□□□ 0.18
VSX1-202ENST00000376709 DTX2Q86UW9 622 aa16.18■□□□□ 0.18
VSX1-202ENST00000376709 OR1P1Q8NH06 330 aa16.18■□□□□ 0.18
VSX1-202ENST00000376709 ZNF355PQ9NSJ1 428 aa16.18■□□□□ 0.18
VSX1-202ENST00000376709 HILPDAQ9Y5L2 63 aa16.18■□□□□ 0.18
VSX1-202ENST00000376709 HELTA6NFD8 242 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 GGTLC3B5MD39 225 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 LDLRAD2Q5SZI1 272 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 TEX38Q6PEX7 206 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 OR11H6Q8NGC7 330 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 FAM167A-AS1Q96KT0 104 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 IMMP2LQ96T52 175 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 RNF5Q99942 180 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 GSN-AS1Q9NRJ2 163 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 TNFRSF19Q9NS68 423 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 DPM3Q9P2X0 92 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 A0A1W2PRE2 83 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 CORTO00230 105 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 MOSP00540 346 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 FABP1P07148 127 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 SUMO1P63165 101 aaKnown RBP16.17■□□□□ 0.18
VSX1-202ENST00000376709 LCN2P80188 198 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 PYY3Q5JQD4 70 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 OR10G8Q8NGN5 311 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 SGMS2Q8NHU3 365 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 SRSF12Q8WXF0 261 aaKnown RBP16.17■□□□□ 0.18
VSX1-202ENST00000376709 IGSF10Q6WRI0 2623 aa16.17■□□□□ 0.18
VSX1-202ENST00000376709 A0A0U1RQK1 487 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 K7EN84 100 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 M0R1W7 72 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms