RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 RNASE12Q5GAN4 147 aaKnown RBP13.53□□□□□ -0.24
HDAC6-202ENST00000376610 ZFAND1Q8TCF1 268 aa13.53□□□□□ -0.24
HDAC6-202ENST00000376610 C2CD4CQ8TF44 421 aa13.53□□□□□ -0.24
HDAC6-202ENST00000376610 AP3S1Q92572 193 aa13.53□□□□□ -0.24
HDAC6-202ENST00000376610 TP53RKQ96S44 253 aa13.53□□□□□ -0.24
HDAC6-202ENST00000376610 FUNDC2Q9BWH2 189 aa13.53□□□□□ -0.24
HDAC6-202ENST00000376610 ETV6P41212 452 aa13.52□□□□□ -0.25
HDAC6-202ENST00000376610 TMEM41BQ5BJD5 291 aa13.52□□□□□ -0.25
HDAC6-202ENST00000376610 CENPSQ8N2Z9 138 aa13.52□□□□□ -0.25
HDAC6-202ENST00000376610 LILRB2Q8N423 598 aa13.52□□□□□ -0.25
HDAC6-202ENST00000376610 STXBP6Q8NFX7 210 aa13.52□□□□□ -0.25
HDAC6-202ENST00000376610 TMEM230Q96A57 120 aa13.52□□□□□ -0.25
HDAC6-202ENST00000376610 GRAMD2BQ96HH9 432 aa13.52□□□□□ -0.25
HDAC6-202ENST00000376610 DNAH10Q8IVF4 4471 aa13.52□□□□□ -0.25
HDAC6-202ENST00000376610 A0A1B0GU03 582 aa13.51□□□□□ -0.25
HDAC6-202ENST00000376610 DEFB4AO15263 64 aa13.51□□□□□ -0.25
HDAC6-202ENST00000376610 CLN5O75503 358 aa13.51□□□□□ -0.25
HDAC6-202ENST00000376610 B3GALNT1O75752 331 aa13.51□□□□□ -0.25
HDAC6-202ENST00000376610 CD3DP04234 171 aa13.51□□□□□ -0.25
HDAC6-202ENST00000376610 RNASE2P10153 161 aaKnown RBP13.51□□□□□ -0.25
HDAC6-202ENST00000376610 EIF2B2P49770 351 aaKnown RBP13.51□□□□□ -0.25
HDAC6-202ENST00000376610 PPP5CP53041 499 aa13.51□□□□□ -0.25
HDAC6-202ENST00000376610 LHFPL1Q86WI0 220 aa13.51□□□□□ -0.25
HDAC6-202ENST00000376610 C15orf40Q8WUR7 153 aa13.51□□□□□ -0.25
HDAC6-202ENST00000376610 KLK11Q9UBX7 282 aa13.51□□□□□ -0.25
HDAC6-202ENST00000376610 TRAV30A0A087WSZ9 112 aa13.5□□□□□ -0.25
HDAC6-202ENST00000376610 C11orf94C9JXX5 98 aa13.5□□□□□ -0.25
HDAC6-202ENST00000376610 P0C879 139 aa13.5□□□□□ -0.25
HDAC6-202ENST00000376610 PVRIGQ6DKI7 326 aa13.5□□□□□ -0.25
HDAC6-202ENST00000376610 FAM24BQ8N5W8 94 aa13.5□□□□□ -0.25
HDAC6-202ENST00000376610 OR4X1Q8NH49 305 aa13.5□□□□□ -0.25
HDAC6-202ENST00000376610 RPS10-NUDT3A0A1W2PQS6 291 aa13.49□□□□□ -0.25
HDAC6-202ENST00000376610 SPP1P10451 314 aa13.49□□□□□ -0.25
HDAC6-202ENST00000376610 CRYBB3P26998 211 aa13.49□□□□□ -0.25
HDAC6-202ENST00000376610 RPL5P46777 297 aaKnown RBP13.49□□□□□ -0.25
HDAC6-202ENST00000376610 P2RY1P47900 373 aa13.49□□□□□ -0.25
HDAC6-202ENST00000376610 SCGB2B2Q4G0G5 96 aa13.49□□□□□ -0.25
HDAC6-202ENST00000376610 MORN3Q6PF18 240 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-202ENST00000376610 OR52I2Q8NH67 350 aa13.49□□□□□ -0.25
HDAC6-202ENST00000376610 TERB2Q8NHR7 220 aa13.49□□□□□ -0.25
HDAC6-202ENST00000376610 EXTL2Q9UBQ6 330 aa13.49□□□□□ -0.25
HDAC6-202ENST00000376610 MTFP1Q9UDX5 166 aa13.49□□□□□ -0.25
HDAC6-202ENST00000376610 AGRNO00468 2067 aa13.49□□□□□ -0.25
HDAC6-202ENST00000376610 UCP1P25874 307 aa13.48□□□□□ -0.25
HDAC6-202ENST00000376610 TAS2R19P59542 299 aa13.48□□□□□ -0.25
HDAC6-202ENST00000376610 SP6Q3SY56 376 aa13.48□□□□□ -0.25
HDAC6-202ENST00000376610 FAM219AQ8IW50 185 aa13.48□□□□□ -0.25
HDAC6-202ENST00000376610 HRH4Q9H3N8 390 aa13.48□□□□□ -0.25
HDAC6-202ENST00000376610 HELTA6NFD8 242 aa13.47□□□□□ -0.25
HDAC6-202ENST00000376610 IGLL5B9A064 214 aa13.47□□□□□ -0.25
HDAC6-202ENST00000376610 K7EQG2 157 aa13.47□□□□□ -0.25
HDAC6-202ENST00000376610 ZNF688P0C7X2 276 aa13.47□□□□□ -0.25
HDAC6-202ENST00000376610 MIFP14174 115 aa13.47□□□□□ -0.25
HDAC6-202ENST00000376610 HTR2BP41595 481 aa13.47□□□□□ -0.25
HDAC6-202ENST00000376610 SPCS3P61009 180 aa13.47□□□□□ -0.25
HDAC6-202ENST00000376610 TRPT1Q86TN4 253 aaKnown RBP13.47□□□□□ -0.25
HDAC6-202ENST00000376610 OR13C8Q8NGS7 320 aa13.47□□□□□ -0.25
HDAC6-202ENST00000376610 FNDC4Q9H6D8 234 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-202ENST00000376610 HEYLQ9NQ87 328 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-202ENST00000376610 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-202ENST00000376610 C14orf166Q9Y224 244 aaKnown RBP13.47□□□□□ -0.25
HDAC6-202ENST00000376610 RAB3DO95716 219 aa13.46□□□□□ -0.25
HDAC6-202ENST00000376610 ZNF182P17025 639 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-202ENST00000376610 AP2S1P53680 142 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-202ENST00000376610 TIGITQ495A1 244 aa13.46□□□□□ -0.25
HDAC6-202ENST00000376610 Q8NAQ8 132 aa13.46□□□□□ -0.25
HDAC6-202ENST00000376610 TMEM229BQ8NBD8 167 aa13.46□□□□□ -0.25
HDAC6-202ENST00000376610 OR52E5Q8NH55 327 aa13.46□□□□□ -0.25
HDAC6-202ENST00000376610 MARCH1Q8TCQ1 289 aa13.46□□□□□ -0.25
HDAC6-202ENST00000376610 Q8WTZ3 238 aa13.46□□□□□ -0.25
HDAC6-202ENST00000376610 MRPL36Q9P0J6 103 aaKnown RBP13.46□□□□□ -0.25
HDAC6-202ENST00000376610 IGHV4-28A0A0C4DH34 117 aa13.45□□□□□ -0.26
HDAC6-202ENST00000376610 DHRS2Q13268 280 aa13.45□□□□□ -0.26
HDAC6-202ENST00000376610 MLANAQ16655 118 aa13.45□□□□□ -0.26
HDAC6-202ENST00000376610 BSXQ3C1V8 233 aa13.45□□□□□ -0.26
HDAC6-202ENST00000376610 ACTL10Q5JWF8 245 aa13.45□□□□□ -0.26
HDAC6-202ENST00000376610 OR1S2Q8NGQ3 325 aa13.45□□□□□ -0.26
HDAC6-202ENST00000376610 TMEM222Q9H0R3 208 aa13.45□□□□□ -0.26
HDAC6-202ENST00000376610 VPS13DQ5THJ4 4388 aa13.44□□□□□ -0.26
HDAC6-202ENST00000376610 DNAH6Q9C0G6 4158 aa13.44□□□□□ -0.26
HDAC6-202ENST00000376610 A0A0G2JRQ6 117 aa13.44□□□□□ -0.26
HDAC6-202ENST00000376610 TEX13DA0A0J9YY54 714 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-202ENST00000376610 KNCNA6PVL3 124 aa13.44□□□□□ -0.26
HDAC6-202ENST00000376610 IGKV1-17P01599 117 aa13.44□□□□□ -0.26
HDAC6-202ENST00000376610 CD74P04233 296 aa13.44□□□□□ -0.26
HDAC6-202ENST00000376610 SLC25A4P12235 298 aa13.44□□□□□ -0.26
HDAC6-202ENST00000376610 MEF2DQ14814 521 aa13.44□□□□□ -0.26
HDAC6-202ENST00000376610 STEAP1BQ6NZ63 245 aa13.44□□□□□ -0.26
HDAC6-202ENST00000376610 OR4D10Q8NGI6 311 aa13.44□□□□□ -0.26
HDAC6-202ENST00000376610 DCANP1Q8TF63 244 aa13.44□□□□□ -0.26
HDAC6-202ENST00000376610 ABHD1Q96SE0 405 aa13.44□□□□□ -0.26
HDAC6-202ENST00000376610 CEBPZOSA8MTT3 80 aa13.43□□□□□ -0.26
HDAC6-202ENST00000376610 CDS2O95674 445 aa13.43□□□□□ -0.26
HDAC6-202ENST00000376610 HNRNPCP07910 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
HDAC6-202ENST00000376610 OR5AC1P0C628 307 aa13.43□□□□□ -0.26
HDAC6-202ENST00000376610 HLA-DMBP28068 263 aa13.43□□□□□ -0.26
HDAC6-202ENST00000376610 OR10J1P30954 320 aa13.43□□□□□ -0.26
HDAC6-202ENST00000376610 RND2P52198 227 aa13.43□□□□□ -0.26
HDAC6-202ENST00000376610 DHODHQ02127 395 aa13.43□□□□□ -0.26
HDAC6-202ENST00000376610 SSBP1Q04837 148 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms