RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 C1orf159Q96HA4 380 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 WNT10AQ9GZT5 417 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 NPVFQ9HCQ7 196 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 IGHV1-69-2A0A0G2JMI3 117 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 ESDP10768 282 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 MIC13Q5XKP0 118 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 ATOH7Q8N100 152 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 TXN2Q99757 166 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 GGTLC1Q9BX51 225 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 PKDREJQ9NTG1 2253 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 IGLC2P0DOY2 106 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 IGLC3P0DOY3 106 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 LOXP28300 417 aaPredicted RBP11.34□□□□□ -0.59
MSH5-202ENST00000375740 GRNP28799 593 aaKnown RBP11.34□□□□□ -0.59
MSH5-202ENST00000375740 CA7P43166 264 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 REG1BP48304 166 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 EFNB3Q15768 340 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 ALKBH7Q9BT30 221 aaPredicted RBP11.34□□□□□ -0.59
MSH5-202ENST00000375740 POLEQ07864 2286 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 ARFGEF3Q5TH69 2177 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 TEX50A0A1B0GTY4 177 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 A0A1W2PPV4 95 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 B9A039 149 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 M0QZ24 198 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 CCL21O00585 134 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 OCC1Q8TAD7 63 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 ORAOV1Q8WV07 137 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 KAAG1Q9UBP8 84 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 ZNF257Q9Y2Q1 563 aa11.34□□□□□ -0.59
MSH5-202ENST00000375740 TBL2Q9Y4P3 447 aaKnown RBP11.34□□□□□ -0.59
MSH5-202ENST00000375740 SPINK4O60575 86 aa11.33□□□□□ -0.59
MSH5-202ENST00000375740 GPX1P07203 203 aa11.33□□□□□ -0.59
MSH5-202ENST00000375740 SAA1P0DJI8 122 aaPredicted RBP11.33□□□□□ -0.59
MSH5-202ENST00000375740 IER3P46695 156 aa11.33□□□□□ -0.59
MSH5-202ENST00000375740 UCNP55089 124 aa11.33□□□□□ -0.59
MSH5-202ENST00000375740 BPIFB3P59826 476 aa11.33□□□□□ -0.59
MSH5-202ENST00000375740 SUMO1P63165 101 aaKnown RBP11.33□□□□□ -0.59
MSH5-202ENST00000375740 PRCDQ00LT1 54 aa11.33□□□□□ -0.59
MSH5-202ENST00000375740 ZNF90Q03938 601 aa11.33□□□□□ -0.59
MSH5-202ENST00000375740 UBE2V1Q13404 147 aa11.33□□□□□ -0.59
MSH5-202ENST00000375740 DIAPH2-AS1Q14236 149 aa11.33□□□□□ -0.59
MSH5-202ENST00000375740 KIAA1644Q3SXP7 199 aa11.33□□□□□ -0.59
MSH5-202ENST00000375740 SSMEM1Q8WWF3 244 aa11.33□□□□□ -0.59
MSH5-202ENST00000375740 RCHY1Q96PM5 261 aa11.33□□□□□ -0.59
MSH5-202ENST00000375740 PLEKHA3Q9HB20 300 aa11.33□□□□□ -0.59
MSH5-202ENST00000375740 LSM4Q9Y4Z0 139 aaKnown RBP11.33□□□□□ -0.59
MSH5-202ENST00000375740 ADGRG4Q8IZF6 3080 aa11.33□□□□□ -0.6
MSH5-202ENST00000375740 H0YJW9 148 aa11.33□□□□□ -0.6
MSH5-202ENST00000375740 APOA2P02652 100 aa11.33□□□□□ -0.6
MSH5-202ENST00000375740 CD99P14209 185 aa11.33□□□□□ -0.6
MSH5-202ENST00000375740 SIGLECL1Q8N7X8 197 aa11.33□□□□□ -0.6
MSH5-202ENST00000375740 OR4B1Q8NGF8 309 aa11.33□□□□□ -0.6
MSH5-202ENST00000375740 OR10X1Q8NGY0 326 aa11.33□□□□□ -0.6
MSH5-202ENST00000375740 GNB4Q9HAV0 340 aa11.33□□□□□ -0.6
MSH5-202ENST00000375740 BET1LQ9NYM9 111 aa11.33□□□□□ -0.6
MSH5-202ENST00000375740 TLN1Q9Y490 2541 aaKnown RBP11.33□□□□□ -0.6
MSH5-202ENST00000375740 KALRNO60229 2985 aa11.33□□□□□ -0.6
MSH5-202ENST00000375740 MDFIC2A0A1B0GVS7 189 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 F6UZH7 168 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 LYNX1G3V0Z9 82 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 FCN1O00602 326 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 LYNX1P0DP58 116 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 S100A7P31151 101 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 HNRNPA3P51991 378 aaKnown RBP11.32□□□□□ -0.6
MSH5-202ENST00000375740 DLX6P56179 175 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 OR5AN1Q8NGI8 311 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 OSR1Q8TAX0 266 aaPredicted RBP11.32□□□□□ -0.6
MSH5-202ENST00000375740 RNF2Q99496 336 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 NRN1Q9NPD7 142 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 RNF24Q9Y225 148 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 K7EP13 123 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 TEPPQ6URK8 271 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 RAB1CQ92928 201 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 HARBI1Q96MB7 349 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 UQCR10Q9UDW1 63 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 SCO2A0A1W2PP80 73 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 PMCHP20382 165 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 KLRB1Q12918 225 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 OR10G8Q8NGN5 311 aa11.32□□□□□ -0.6
MSH5-202ENST00000375740 SNURFLB1AK76 121 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 FBXL19-AS1Q494R0 122 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 TMEM155Q4W5P6 130 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 TMEM177Q53S58 311 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 LINC00311Q8N616 119 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 ZNF596Q8TC21 504 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 FLYWCH2Q96CP2 140 aaKnown RBP11.31□□□□□ -0.6
MSH5-202ENST00000375740 NABP2Q9BQ15 211 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 TP73-AS1Q9UF72 201 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 TNCP24821 2201 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 K7EN84 100 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 AMTP48728 403 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 CDSNQ15517 529 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 TMEM249Q2WGJ8 235 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 FAM19A2Q8N3H0 131 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 ST6GALNAC3Q8NDV1 305 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 OR10W1Q8NGF6 305 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 ST6GALNAC6Q969X2 333 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 TMEM186Q96B77 213 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 FAM122AQ96E09 287 aa11.31□□□□□ -0.6
MSH5-202ENST00000375740 COX11Q9Y6N1 276 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 1185.6 ms