RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 VN1R17PQ8TDU5 208 aa11.79□□□□□ -0.52
MSH5-201ENST00000375703 LINC00479Q96M42 142 aa11.79□□□□□ -0.52
MSH5-201ENST00000375703 ATG101Q9BSB4 218 aa11.79□□□□□ -0.52
MSH5-201ENST00000375703 COX7A2P2O60397 106 aa11.78□□□□□ -0.52
MSH5-201ENST00000375703 BRS3P32247 399 aa11.78□□□□□ -0.52
MSH5-201ENST00000375703 MRPL54Q6P161 138 aaKnown RBP11.78□□□□□ -0.52
MSH5-201ENST00000375703 TEX43Q6ZNM6 134 aa11.78□□□□□ -0.52
MSH5-201ENST00000375703 H1FXQ92522 213 aaKnown RBP11.78□□□□□ -0.52
MSH5-201ENST00000375703 NPIPB3Q92617 1050 aa11.78□□□□□ -0.52
MSH5-201ENST00000375703 FAM103A1Q9BTL3 118 aaKnown RBP11.78□□□□□ -0.52
MSH5-201ENST00000375703 SMIM27A0A1W2PRY6 76 aa11.78□□□□□ -0.52
MSH5-201ENST00000375703 INS-IGF2F8WCM5 200 aa11.78□□□□□ -0.52
MSH5-201ENST00000375703 GPX1P07203 203 aa11.78□□□□□ -0.52
MSH5-201ENST00000375703 ADIPOQQ15848 244 aa11.78□□□□□ -0.52
MSH5-201ENST00000375703 WFDC8Q8IUA0 241 aa11.78□□□□□ -0.52
MSH5-201ENST00000375703 NHLRC2Q8NBF2 726 aa11.78□□□□□ -0.52
MSH5-201ENST00000375703 VSTM2AQ8TAG5 236 aa11.78□□□□□ -0.52
MSH5-201ENST00000375703 TMEM167AQ8TBQ9 72 aa11.78□□□□□ -0.52
MSH5-201ENST00000375703 PPIAL4EA0A075B759 164 aa11.77□□□□□ -0.52
MSH5-201ENST00000375703 PPIAL4DF5H284 164 aa11.77□□□□□ -0.52
MSH5-201ENST00000375703 IGHV3-48P01763 117 aa11.77□□□□□ -0.52
MSH5-201ENST00000375703 AMY1AP04745 511 aa11.77□□□□□ -0.52
MSH5-201ENST00000375703 PPIAL4FP0DN26 164 aa11.77□□□□□ -0.52
MSH5-201ENST00000375703 SUB1P53999 127 aaKnown RBP eCLIP11.77□□□□□ -0.522e-7■■□□□ 14.2
MSH5-201ENST00000375703 WT1-ASQ06250 92 aa11.77□□□□□ -0.52
MSH5-201ENST00000375703 DIAPH2-AS1Q14236 149 aa11.77□□□□□ -0.52
MSH5-201ENST00000375703 OR10J3Q5JRS4 329 aa11.77□□□□□ -0.52
MSH5-201ENST00000375703 C10orf113Q5VZT2 155 aa11.77□□□□□ -0.52
MSH5-201ENST00000375703 OR1L4Q8NGR5 311 aa11.77□□□□□ -0.52
MSH5-201ENST00000375703 FNDC4Q9H6D8 234 aaPredicted RBP11.77□□□□□ -0.52
MSH5-201ENST00000375703 ZNF355PQ9NSJ1 428 aa11.77□□□□□ -0.52
MSH5-201ENST00000375703 CDC42EP3Q9UKI2 254 aa11.77□□□□□ -0.52
MSH5-201ENST00000375703 AMMECR1Q9Y4X0 333 aaPredicted RBP11.77□□□□□ -0.52
MSH5-201ENST00000375703 PPIAL4AQ9Y536 164 aa11.77□□□□□ -0.52
MSH5-201ENST00000375703 BOD1L1Q8NFC6 3051 aa11.77□□□□□ -0.53
MSH5-201ENST00000375703 FCN3O75636 299 aa11.77□□□□□ -0.53
MSH5-201ENST00000375703 PYYP10082 97 aa11.77□□□□□ -0.53
MSH5-201ENST00000375703 OR4A5Q8NH83 315 aa11.77□□□□□ -0.53
MSH5-201ENST00000375703 PAXXQ9BUH6 204 aa11.77□□□□□ -0.53
MSH5-201ENST00000375703 DPRXA6NFQ7 191 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 CGB1A6NKQ9 187 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 C16orf97H3BN30 126 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 ZNF253O75346 499 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 RAB4AP20338 218 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 BPIFB3P59826 476 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 C10orf55Q5SWW7 151 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 PATE2Q6UY27 113 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 PDPNQ86YL7 162 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 FAM168AQ92567 244 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 CCL17Q92583 94 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 TMEM186Q96B77 213 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 C20orf144Q9BQM9 153 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 ZNF430Q9H8G1 570 aaPredicted RBP11.76□□□□□ -0.53
MSH5-201ENST00000375703 PAM16Q9Y3D7 125 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 CA1P00915 261 aaPredicted RBP11.76□□□□□ -0.53
MSH5-201ENST00000375703 HLA-DQA1P01909 254 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 TMEM183BQ1AE95 376 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 SAP30LQ9HAJ7 183 aa11.76□□□□□ -0.53
MSH5-201ENST00000375703 TCRBV4S1A1TA0A5B7 111 aa11.75□□□□□ -0.53
MSH5-201ENST00000375703 IZUMO1RA6ND01 250 aa11.75□□□□□ -0.53
MSH5-201ENST00000375703 TMEM178BH3BS89 294 aa11.75□□□□□ -0.53
MSH5-201ENST00000375703 NDUFB3O43676 98 aa11.75□□□□□ -0.53
MSH5-201ENST00000375703 MIEN1Q9BRT3 115 aa11.75□□□□□ -0.53
MSH5-201ENST00000375703 VAMP8Q9BV40 100 aa11.75□□□□□ -0.53
MSH5-201ENST00000375703 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
MSH5-201ENST00000375703 ZNF331Q9NQX6 463 aaPredicted RBP11.75□□□□□ -0.53
MSH5-201ENST00000375703 SRIP30626 198 aa11.75□□□□□ -0.53
MSH5-201ENST00000375703 KRTDAPP60985 99 aa11.75□□□□□ -0.53
MSH5-201ENST00000375703 LYPD2Q6UXB3 125 aa11.75□□□□□ -0.53
MSH5-201ENST00000375703 ZNF586Q9NXT0 402 aa11.75□□□□□ -0.53
MSH5-201ENST00000375703 FBXL7Q9UJT9 491 aa11.75□□□□□ -0.53
MSH5-201ENST00000375703 WASHC3Q9Y3C0 194 aa11.75□□□□□ -0.53
MSH5-201ENST00000375703 TBL2Q9Y4P3 447 aaKnown RBP11.75□□□□□ -0.53
MSH5-201ENST00000375703 PLCE1Q9P212 2302 aa11.75□□□□□ -0.53
MSH5-201ENST00000375703 A0A0G2JNJ9 132 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 A0A1W2PS18 150 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 BMPR1BO00238 502 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 IGLV2-23P01705 113 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 APCSP02743 223 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 AMTP48728 403 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 BSPH1Q075Z2 132 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 LRRC10Q5BKY1 277 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 ASPHD1Q5U4P2 390 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 ZNF329Q86UD4 541 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 Q9UFV3 132 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 IGKV1D-37A0A075B6S9 117 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 TRAV34A0A0B4J273 112 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 TDGF1P3P51864 188 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 RCHY1Q96PM5 261 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 NRN1Q9NPD7 142 aa11.74□□□□□ -0.53
MSH5-201ENST00000375703 EP300Q09472 2414 aaPredicted RBP11.74□□□□□ -0.53
MSH5-201ENST00000375703 COMPP49747 757 aaPredicted RBP11.73□□□□□ -0.53
MSH5-201ENST00000375703 FAM71F2Q6NXP2 309 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 LINC00311Q8N616 119 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 ST6GALNAC6Q969X2 333 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 KCNS1Q96KK3 526 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 MRPL36Q9P0J6 103 aaKnown RBP11.73□□□□□ -0.53
MSH5-201ENST00000375703 SSUH2Q9Y2M2 353 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 RNF114Q9Y508 228 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 PEX7O00628 323 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms