RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 DNM1P46Q6ZS02 220 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 CIARTQ8N365 385 aaPredicted RBP6.42□□□□□ -1.38
USP48-203ENST00000374732 C3orf22Q8N5N4 141 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 SIGLECL1Q8N7X8 197 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 MANBALQ9NQG1 85 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 ZNF253O75346 499 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 TNFP01375 233 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 IGLL1P15814 213 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 LEG1Q6P5S2 330 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 LINC00596Q86U02 117 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 FAM103A1Q9BTL3 118 aaKnown RBP6.42□□□□□ -1.38
USP48-203ENST00000374732 PLA2G2FQ9BZM2 168 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 RNF7Q9UBF6 113 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 RNF114Q9Y508 228 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 MED12LQ86YW9 2145 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 ZAR1LA6NP61 321 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 HMGN4O00479 90 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 BUB3O43684 328 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 PIPP12273 146 aaPredicted RBP6.42□□□□□ -1.38
USP48-203ENST00000374732 DAZ2Q13117 558 aaKnown RBP6.42□□□□□ -1.38
USP48-203ENST00000374732 KLF9Q13886 244 aaPredicted RBP6.42□□□□□ -1.38
USP48-203ENST00000374732 VAX1Q5SQQ9 334 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 DAZ4Q86SG3 579 aaKnown RBP6.42□□□□□ -1.38
USP48-203ENST00000374732 RNF166Q96A37 237 aaPredicted RBP6.42□□□□□ -1.38
USP48-203ENST00000374732 FMC1Q96HJ9 113 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 FOXB1Q99853 325 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 CHCHD5Q9BSY4 110 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 DAZ1Q9NQZ3 744 aaKnown RBP6.42□□□□□ -1.38
USP48-203ENST00000374732 DAZ3Q9NR90 486 aaKnown RBP6.42□□□□□ -1.38
USP48-203ENST00000374732 SAA2-SAA4A0A096LPE2 208 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 TRAV1-1A0A0B4J248 108 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 IGKV1-8A0A0C4DH67 115 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 TMEM272A0A1B0GTI8 110 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 ZC3H12DA2A288 527 aaKnown RBP6.41□□□□□ -1.38
USP48-203ENST00000374732 CDX4O14627 284 aaPredicted RBP6.41□□□□□ -1.38
USP48-203ENST00000374732 PAX4O43316 350 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 SAA4P35542 130 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 SNRPGP62308 76 aaKnown RBP6.41□□□□□ -1.38
USP48-203ENST00000374732 PMCHL1Q16048 86 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 KLF17Q5JT82 389 aaPredicted RBP6.41□□□□□ -1.38
USP48-203ENST00000374732 GTSCR1Q86UQ5 136 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 RPS19BP1Q86WX3 136 aaKnown RBP6.41□□□□□ -1.38
USP48-203ENST00000374732 PRIMA1Q86XR5 153 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 TMEM191AQ9H0A3 160 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 CYTL1Q9NRR1 136 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 CHCHD2Q9Y6H1 151 aaPredicted RBP6.41□□□□□ -1.38
USP48-203ENST00000374732 NUP214P35658 2090 aaPredicted RBP6.41□□□□□ -1.38
USP48-203ENST00000374732 A0A1B0GWB2 263 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 GFRA3O60609 400 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 CTLA4P16410 223 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 EDNRAP25101 427 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 FAUP35544 74 aaKnown RBP6.41□□□□□ -1.38
USP48-203ENST00000374732 PPICP45877 212 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 SLC25A30Q5SVS4 291 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 ANKRD29Q8N6D5 301 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 ZNF837Q96EG3 531 aaPredicted RBP6.41□□□□□ -1.38
USP48-203ENST00000374732 S1PR3Q99500 378 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 PARP12Q9H0J9 701 aaKnown RBP6.41□□□□□ -1.38
USP48-203ENST00000374732 TRPM6Q9BX84 2022 aa6.41□□□□□ -1.38
USP48-203ENST00000374732 MEIS3P1A6NDR6 274 aa6.4□□□□□ -1.38
USP48-203ENST00000374732 TMEM262E9PQX1 116 aa6.4□□□□□ -1.38
USP48-203ENST00000374732 ZNF737O75373 536 aa6.4□□□□□ -1.38
USP48-203ENST00000374732 DUSP14O95147 198 aaKnown RBP6.4□□□□□ -1.38
USP48-203ENST00000374732 IL15RAQ13261 267 aa6.4□□□□□ -1.38
USP48-203ENST00000374732 SAMD5Q5TGI4 173 aa6.4□□□□□ -1.38
USP48-203ENST00000374732 LHFPL1Q86WI0 220 aa6.4□□□□□ -1.38
USP48-203ENST00000374732 LINC00311Q8N616 119 aa6.4□□□□□ -1.38
USP48-203ENST00000374732 STPG3Q8N7X2 389 aa6.4□□□□□ -1.38
USP48-203ENST00000374732 IGFBPL1Q8WX77 278 aa6.4□□□□□ -1.38
USP48-203ENST00000374732 FAM19A4Q96LR4 140 aa6.4□□□□□ -1.38
USP48-203ENST00000374732 RALGAPA1Q6GYQ0 2036 aa6.4□□□□□ -1.38
USP48-203ENST00000374732 FFAR1O14842 300 aa6.4□□□□□ -1.39
USP48-203ENST00000374732 GASTP01350 101 aa6.4□□□□□ -1.39
USP48-203ENST00000374732 WT1P19544 449 aaPredicted RBP6.4□□□□□ -1.39
USP48-203ENST00000374732 LIM2P55344 173 aa6.4□□□□□ -1.39
USP48-203ENST00000374732 HLA-DRB3P79483 266 aa6.4□□□□□ -1.39
USP48-203ENST00000374732 TFF2Q03403 129 aa6.4□□□□□ -1.39
USP48-203ENST00000374732 ZNF506Q5JVG8 444 aa6.4□□□□□ -1.39
USP48-203ENST00000374732 ANKRD37Q7Z713 158 aa6.4□□□□□ -1.39
USP48-203ENST00000374732 NABP1Q96AH0 204 aa6.4□□□□□ -1.39
USP48-203ENST00000374732 SLC25A44Q96H78 314 aaPredicted RBP6.4□□□□□ -1.39
USP48-203ENST00000374732 DSCR8Q96T75 97 aa6.4□□□□□ -1.39
USP48-203ENST00000374732 PYGO2Q9BRQ0 406 aa6.4□□□□□ -1.39
USP48-203ENST00000374732 POLR2J2Q9GZM3 115 aaKnown RBP6.4□□□□□ -1.39
USP48-203ENST00000374732 AICDAQ9GZX7 198 aa6.4□□□□□ -1.39
USP48-203ENST00000374732 LYZL6O75951 148 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 NAPSAO96009 420 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 EIF4EP06730 217 aaKnown RBP6.39□□□□□ -1.39
USP48-203ENST00000374732 IFI6P09912 130 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 PPP1CCP36873 323 aaKnown RBP6.39□□□□□ -1.39
USP48-203ENST00000374732 RBMXP38159 391 aaKnown RBP6.39□□□□□ -1.39
USP48-203ENST00000374732 SSR2P43308 183 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 POU3F1Q03052 451 aaPredicted RBP6.39□□□□□ -1.39
USP48-203ENST00000374732 ZNF793Q6ZN11 406 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 BCDIN3DQ7Z5W3 292 aaKnown RBP6.39□□□□□ -1.39
USP48-203ENST00000374732 CYB561D1Q8N8Q1 229 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 NT5CQ8TCD5 201 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 TRIOBPQ9H2D6 2365 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 A0A1B0GTH9 108 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 FAM90A26D6RGX4 464 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms