RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 RPEL1Q2QD12 228 aa11.3□□□□□ -0.6
HMGCL-203ENST00000374490 C9orf152Q5JTZ5 239 aa11.3□□□□□ -0.6
HMGCL-203ENST00000374490 OR9G1Q8NH87 305 aa11.3□□□□□ -0.6
HMGCL-203ENST00000374490 H1FXQ92522 213 aaKnown RBP11.3□□□□□ -0.6
HMGCL-203ENST00000374490 NOL4LQ96MY1 436 aaPredicted RBP11.3□□□□□ -0.6
HMGCL-203ENST00000374490 DYNLRB1Q9NP97 96 aa11.3□□□□□ -0.6
HMGCL-203ENST00000374490 TANC2Q9HCD6 1990 aa11.3□□□□□ -0.6
HMGCL-203ENST00000374490 MYO9AB2RTY4 2548 aa11.3□□□□□ -0.6
HMGCL-203ENST00000374490 RAI1Q7Z5J4 1906 aaPredicted RBP11.29□□□□□ -0.6
HMGCL-203ENST00000374490 CACNA1DQ01668 2161 aa11.29□□□□□ -0.6
HMGCL-203ENST00000374490 TRBV23-1A0A0A0MS06 115 aa11.29□□□□□ -0.6
HMGCL-203ENST00000374490 OR7C2O60412 319 aa11.29□□□□□ -0.6
HMGCL-203ENST00000374490 CHRNB4P30926 498 aa11.29□□□□□ -0.6
HMGCL-203ENST00000374490 BPIFB3P59826 476 aa11.29□□□□□ -0.6
HMGCL-203ENST00000374490 TIGITQ495A1 244 aa11.29□□□□□ -0.6
HMGCL-203ENST00000374490 TNFRSF14Q92956 283 aa11.29□□□□□ -0.6
HMGCL-203ENST00000374490 SLC25A33Q9BSK2 321 aa11.29□□□□□ -0.6
HMGCL-203ENST00000374490 ZNF430Q9H8G1 570 aaPredicted RBP11.29□□□□□ -0.6
HMGCL-203ENST00000374490 OSTCQ9NRP0 149 aa11.29□□□□□ -0.6
HMGCL-203ENST00000374490 K7EN84 100 aa11.28□□□□□ -0.6
HMGCL-203ENST00000374490 PAX1P15863 534 aa11.28□□□□□ -0.6
HMGCL-203ENST00000374490 DDTP30046 118 aa11.28□□□□□ -0.6
HMGCL-203ENST00000374490 LGALS7P47929 136 aa11.28□□□□□ -0.6
HMGCL-203ENST00000374490 LGALS4P56470 323 aa11.28□□□□□ -0.6
HMGCL-203ENST00000374490 IQCJQ1A5X6 159 aa11.28□□□□□ -0.6
HMGCL-203ENST00000374490 TMEM155Q4W5P6 130 aa11.28□□□□□ -0.6
HMGCL-203ENST00000374490 CENPWQ5EE01 88 aa11.28□□□□□ -0.6
HMGCL-203ENST00000374490 REC114Q7Z4M0 266 aa11.28□□□□□ -0.6
HMGCL-203ENST00000374490 RNASE6Q93091 150 aaKnown RBP11.28□□□□□ -0.6
HMGCL-203ENST00000374490 ST6GALNAC6Q969X2 333 aa11.28□□□□□ -0.6
HMGCL-203ENST00000374490 DSCAML1Q8TD84 2053 aa11.28□□□□□ -0.6
HMGCL-203ENST00000374490 TET2Q6N021 2002 aaPredicted RBP11.28□□□□□ -0.6
HMGCL-203ENST00000374490 DOCK11Q5JSL3 2073 aa11.28□□□□□ -0.6
HMGCL-203ENST00000374490 IGKV1OR2-108A0A075B7D4 117 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 FAM90A27PA6NNH2 459 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 MT-ND6P03923 174 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 LOXP28300 417 aaPredicted RBP11.27□□□□□ -0.6
HMGCL-203ENST00000374490 DLX6P56179 175 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 TAS2R60P59551 318 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 ERVFC1-1P60608 527 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 ETFRF1Q6IPR1 90 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 WDR73Q6P4I2 378 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 TGIF2LXQ8IUE1 241 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 THAP8Q8NA92 274 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 CCL17Q92583 94 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 ZNF503Q96F45 646 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 DNAJC4Q9NNZ3 241 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 ZNRD1Q9P1U0 126 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 ZMAT5Q9UDW3 170 aaKnown RBP11.27□□□□□ -0.6
HMGCL-203ENST00000374490 DSCAMO60469 2012 aa11.27□□□□□ -0.6
HMGCL-203ENST00000374490 TCRBV4S1A1TA0A5B7 111 aa11.27□□□□□ -0.61
HMGCL-203ENST00000374490 ISLRO14498 428 aa11.27□□□□□ -0.61
HMGCL-203ENST00000374490 RD3LP0DJH9 198 aa11.27□□□□□ -0.61
HMGCL-203ENST00000374490 HNF1AP20823 631 aa11.27□□□□□ -0.61
HMGCL-203ENST00000374490 CRYBB3P26998 211 aa11.27□□□□□ -0.61
HMGCL-203ENST00000374490 MOB3BQ86TA1 216 aa11.27□□□□□ -0.61
HMGCL-203ENST00000374490 MMD2Q8IY49 270 aa11.27□□□□□ -0.61
HMGCL-203ENST00000374490 OR10W1Q8NGF6 305 aa11.27□□□□□ -0.61
HMGCL-203ENST00000374490 V9GYV3 84 aa11.27□□□□□ -0.61
HMGCL-203ENST00000374490 PSMB11A5LHX3 300 aa11.26□□□□□ -0.61
HMGCL-203ENST00000374490 COX7A2P2O60397 106 aa11.26□□□□□ -0.61
HMGCL-203ENST00000374490 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
HMGCL-203ENST00000374490 ADMP35318 185 aa11.26□□□□□ -0.61
HMGCL-203ENST00000374490 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
HMGCL-203ENST00000374490 PAFAH1B2P68402 229 aa11.26□□□□□ -0.61
HMGCL-203ENST00000374490 TEX45Q8NA69 505 aa11.26□□□□□ -0.61
HMGCL-203ENST00000374490 OR1L6Q8NGR2 347 aa11.26□□□□□ -0.61
HMGCL-203ENST00000374490 WFIKKN1Q96NZ8 548 aa11.26□□□□□ -0.61
HMGCL-203ENST00000374490 DIDO1Q9BTC0 2240 aaKnown RBP11.26□□□□□ -0.61
HMGCL-203ENST00000374490 CREBBPQ92793 2442 aa11.26□□□□□ -0.61
HMGCL-203ENST00000374490 PCNX1Q96RV3 2341 aa11.26□□□□□ -0.61
HMGCL-203ENST00000374490 DOPEY1Q5JWR5 2465 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 DYSFO75923 2080 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 SHISA9B4DS77 424 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 B9A039 149 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 FCN3O75636 299 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 IGHV1-8P0DP01 117 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 ESDP10768 282 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 PPOXP50336 477 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 FBXL19-AS1Q494R0 122 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 LYPD2Q6UXB3 125 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 FAM167A-AS1Q96KT0 104 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 SLC25A2Q9BXI2 301 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 GNB1LQ9BYB4 327 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 MRPL18Q9H0U6 180 aaKnown RBP11.25□□□□□ -0.61
HMGCL-203ENST00000374490 CTSZQ9UBR2 303 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 POLEQ07864 2286 aa11.25□□□□□ -0.61
HMGCL-203ENST00000374490 IGHV1-69-2A0A0G2JMI3 117 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 GGTLC3B5MD39 225 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 SLC17A3O00476 420 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 FSTL3O95633 263 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 APOBEC3AP31941 199 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-203ENST00000374490 REG1BP48304 166 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 PRRX1P54821 245 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 TPPP2P59282 170 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 RANP62826 216 aaKnown RBP11.24□□□□□ -0.61
HMGCL-203ENST00000374490 PAX2Q02962 417 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 C10orf113Q5VZT2 155 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 PVRIGQ6DKI7 326 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 STXBP6Q8NFX7 210 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms