RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 PEMTQ9UBM1 199 aa12.21□□□□□ -0.46
HDHD3-202ENST00000374180 U3KQ87 197 aa12.21□□□□□ -0.46
HDHD3-202ENST00000374180 ZNF320A2RRD8 509 aa12.2□□□□□ -0.46
HDHD3-202ENST00000374180 F8W735 103 aaPredicted RBP12.2□□□□□ -0.46
HDHD3-202ENST00000374180 INMT-MINDY4F8WBC2 141 aa12.2□□□□□ -0.46
HDHD3-202ENST00000374180 PRB2P02812 416 aaPredicted RBP12.2□□□□□ -0.46
HDHD3-202ENST00000374180 NPY1RP25929 384 aa12.2□□□□□ -0.46
HDHD3-202ENST00000374180 KRTAP10-11P60412 298 aa12.2□□□□□ -0.46
HDHD3-202ENST00000374180 C11orf87Q6NUJ2 197 aa12.2□□□□□ -0.46
HDHD3-202ENST00000374180 IGHV3-35A0A0C4DH35 117 aa12.19□□□□□ -0.46
HDHD3-202ENST00000374180 LGALS9O00182 355 aa12.19□□□□□ -0.46
HDHD3-202ENST00000374180 PRAF2O60831 178 aa12.19□□□□□ -0.46
HDHD3-202ENST00000374180 IL5P05113 134 aa12.19□□□□□ -0.46
HDHD3-202ENST00000374180 FCGR2BP31994 310 aaPredicted RBP12.19□□□□□ -0.46
HDHD3-202ENST00000374180 OPRK1P41145 380 aa12.19□□□□□ -0.46
HDHD3-202ENST00000374180 IL34Q6ZMJ4 242 aa12.19□□□□□ -0.46
HDHD3-202ENST00000374180 C12orf45Q8N5I9 185 aaPredicted RBP12.19□□□□□ -0.46
HDHD3-202ENST00000374180 CHRDL1Q9BU40 450 aa12.19□□□□□ -0.46
HDHD3-202ENST00000374180 NUPL2O15504 423 aaKnown RBP12.18□□□□□ -0.46
HDHD3-202ENST00000374180 SYNGR2O43760 224 aa12.18□□□□□ -0.46
HDHD3-202ENST00000374180 GNG7O60262 68 aa12.18□□□□□ -0.46
HDHD3-202ENST00000374180 CTSGP08311 255 aa12.18□□□□□ -0.46
HDHD3-202ENST00000374180 IAPPP10997 89 aa12.18□□□□□ -0.46
HDHD3-202ENST00000374180 NPBWR1P48145 328 aa12.18□□□□□ -0.46
HDHD3-202ENST00000374180 MLANAQ16655 118 aa12.18□□□□□ -0.46
HDHD3-202ENST00000374180 REC114Q7Z4M0 266 aa12.18□□□□□ -0.46
HDHD3-202ENST00000374180 RNASEH2CQ8TDP1 164 aaKnown RBP12.18□□□□□ -0.46
HDHD3-202ENST00000374180 ST6GAL2Q96JF0 529 aa12.18□□□□□ -0.46
HDHD3-202ENST00000374180 MAGT1Q9H0U3 335 aa12.18□□□□□ -0.46
HDHD3-202ENST00000374180 FNDC4Q9H6D8 234 aaPredicted RBP12.18□□□□□ -0.46
HDHD3-202ENST00000374180 RPS10-NUDT3A0A1W2PQS6 291 aa12.17□□□□□ -0.46
HDHD3-202ENST00000374180 CSN3P07498 182 aa12.17□□□□□ -0.46
HDHD3-202ENST00000374180 ADMP35318 185 aa12.17□□□□□ -0.46
HDHD3-202ENST00000374180 NKX2-1P43699 371 aaPredicted RBP12.17□□□□□ -0.46
HDHD3-202ENST00000374180 ATP5IP56385 69 aaPredicted RBP12.17□□□□□ -0.46
HDHD3-202ENST00000374180 ID3Q02535 119 aa12.17□□□□□ -0.46
HDHD3-202ENST00000374180 IAH1Q2TAA2 248 aaPredicted RBP12.17□□□□□ -0.46
HDHD3-202ENST00000374180 TMEM170AQ8WVE7 144 aa12.17□□□□□ -0.46
HDHD3-202ENST00000374180 OR10C1Q96KK4 312 aa12.17□□□□□ -0.46
HDHD3-202ENST00000374180 CIB3Q96Q77 187 aaPredicted RBP12.17□□□□□ -0.46
HDHD3-202ENST00000374180 GPN1Q9HCN4 374 aaPredicted RBP12.17□□□□□ -0.46
HDHD3-202ENST00000374180 AURKAIP1Q9NWT8 199 aaPredicted RBP12.17□□□□□ -0.46
HDHD3-202ENST00000374180 GSKIPQ9P0R6 139 aa12.17□□□□□ -0.46
HDHD3-202ENST00000374180 WRBO00258 174 aa12.16□□□□□ -0.46
HDHD3-202ENST00000374180 RGS13O14921 159 aa12.16□□□□□ -0.46
HDHD3-202ENST00000374180 IFNA4P05014 189 aa12.16□□□□□ -0.46
HDHD3-202ENST00000374180 OR4D5Q8NGN0 318 aa12.16□□□□□ -0.46
HDHD3-202ENST00000374180 ZNF436Q9C0F3 470 aaPredicted RBP12.16□□□□□ -0.46
HDHD3-202ENST00000374180 SIGLEC8Q9NYZ4 499 aa12.16□□□□□ -0.46
HDHD3-202ENST00000374180 SORL1Q92673 2214 aa12.16□□□□□ -0.46
HDHD3-202ENST00000374180 C2orf70A6NJV1 201 aa12.15□□□□□ -0.46
HDHD3-202ENST00000374180 FAM25EA8MYX2 175 aa12.15□□□□□ -0.46
HDHD3-202ENST00000374180 CCSO14618 274 aa12.15□□□□□ -0.46
HDHD3-202ENST00000374180 LY86O95711 162 aa12.15□□□□□ -0.46
HDHD3-202ENST00000374180 IGLV1-51P01701 117 aa12.15□□□□□ -0.46
HDHD3-202ENST00000374180 RPP30P78346 268 aaKnown RBP12.15□□□□□ -0.46
HDHD3-202ENST00000374180 RELQ04864 619 aaPredicted RBP12.15□□□□□ -0.46
HDHD3-202ENST00000374180 ETFRF1Q6IPR1 90 aa12.15□□□□□ -0.46
HDHD3-202ENST00000374180 UNQ9165/PRO28630Q6UXU0 137 aa12.15□□□□□ -0.46
HDHD3-202ENST00000374180 TCTE3Q8IZS6 198 aa12.15□□□□□ -0.46
HDHD3-202ENST00000374180 OR4X1Q8NH49 305 aa12.15□□□□□ -0.46
HDHD3-202ENST00000374180 C5orf51A6NDU8 294 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 NDUFA4O00483 81 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 TMEM50AO95807 157 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 SLC25A4P12235 298 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 FOLR2P14207 255 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 POLR2GP62487 172 aaKnown RBP eCLIP12.14□□□□□ -0.47
HDHD3-202ENST00000374180 RAB11AP62491 216 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 HAPLN4Q86UW8 402 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 ZNF256Q9Y2P7 627 aaPredicted RBP12.14□□□□□ -0.47
HDHD3-202ENST00000374180 UFC1Q9Y3C8 167 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 ALG5Q9Y673 324 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 SNRPGP15A8MWD9 76 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 A8MWP6 167 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 CLN5O75503 358 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 SCGB1D2O95969 90 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 CBLN1P23435 193 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 TM4SF20Q53R12 229 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 C20orf24Q9BUV8 137 aa12.14□□□□□ -0.47
HDHD3-202ENST00000374180 MRPL36Q9P0J6 103 aaKnown RBP12.14□□□□□ -0.47
HDHD3-202ENST00000374180 WI2-2373I1.2A0A1W2PRP0 233 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 TMEM213A2RRL7 107 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 C15orf62A8K5M9 175 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 SSSCA1O60232 199 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 SCGB2A1O75556 95 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 YIF1AO95070 293 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 S100A1P23297 94 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 NKX2-5P52952 324 aaPredicted RBP12.13□□□□□ -0.47
HDHD3-202ENST00000374180 ELLP55199 621 aaPredicted RBP12.13□□□□□ -0.47
HDHD3-202ENST00000374180 SPANXN5Q5MJ07 72 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 PRSS54Q6PEW0 395 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 GSG1LQ6UXU4 331 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 ADAMTSL5Q6ZMM2 481 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 TMEM116Q8NCL8 245 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 DYNLRB2Q8TF09 96 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 TMEM190Q8WZ59 177 aa12.13□□□□□ -0.47
HDHD3-202ENST00000374180 PRKDCP78527 4128 aaKnown RBP12.12□□□□□ -0.47
HDHD3-202ENST00000374180 TRAV30A0A087WSZ9 112 aa12.12□□□□□ -0.47
HDHD3-202ENST00000374180 C7orf66A4D0T2 115 aa12.12□□□□□ -0.47
HDHD3-202ENST00000374180 EDN2P20800 178 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms