RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 PCNX2A6NKB5 2137 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 KLK10O43240 276 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 BRI3O95415 125 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 CYC1P08574 325 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 OR9G9P0C7N8 305 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 YPEL5P62699 121 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 HHEXQ03014 270 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 INO80CQ6PI98 192 aaPredicted RBP7.84□□□□□ -1.15
SF3A3-201ENST00000373019 TMEM116Q8NCL8 245 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 FER1L5A0AVI2 2057 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 IGHV3-7P01780 117 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 FAM87AP0C7U9 286 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 LINC00479Q96M42 142 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 TRIB1Q96RU8 372 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 C17orf98A8MV24 154 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 HIGD1CA8MV81 97 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 LIPFP07098 398 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 TMPRSS3P57727 454 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 MIR17HGQ75NE6 70 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 SPACA9Q96E40 222 aaPredicted RBP7.83□□□□□ -1.16
SF3A3-201ENST00000373019 ZNF488Q96MN9 340 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 DUSP23Q9BVJ7 150 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 LOXL2Q9Y4K0 774 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 MPC1Q9Y5U8 109 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 IGHV3-15A0A0B4J1V0 119 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 IGHV3-20A0A0C4DH32 117 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 SYNGR1O43759 233 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 LINC00205P59089 165 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 FAM53AQ6NSI3 398 aaPredicted RBP7.83□□□□□ -1.16
SF3A3-201ENST00000373019 RNF138Q8WVD3 245 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 RNF183Q96D59 192 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 COL6A6A6NMZ7 2263 aa7.83□□□□□ -1.16
SF3A3-201ENST00000373019 CACNA1DQ01668 2161 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 KLF7O75840 302 aaPredicted RBP7.82□□□□□ -1.16
SF3A3-201ENST00000373019 OR5AL1P0C617 328 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 PSG5Q15238 335 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 TIMM23BQ5SRD1 257 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 GCSAMQ8N6F7 178 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 OR4A16Q8NH70 328 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 FGFBP3Q8TAT2 258 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 ZNF418Q8TF45 676 aaPredicted RBP7.82□□□□□ -1.16
SF3A3-201ENST00000373019 TET2Q6N021 2002 aaPredicted RBP7.82□□□□□ -1.16
SF3A3-201ENST00000373019 NBEAQ8NFP9 2946 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 CA6P23280 308 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 ETDBQ3ZM63 59 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 OR13H1Q8NG92 308 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 OR1L3Q8NH93 324 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 GTSF1Q8WW33 167 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 DLL3Q9NYJ7 618 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 DUSP13Q9UII6 198 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 PIEZO2Q9H5I5 2752 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 IGHV5-51A0A0C4DH38 117 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 ZNF32P17041 273 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 HERV-K104P63124 156 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 FAM162BQ5T6X4 162 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 FAM231DQ6ZW35 169 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 MTURNQ8N3F0 131 aa7.82□□□□□ -1.16
SF3A3-201ENST00000373019 NANOS1Q8WY41 292 aaKnown RBP7.82□□□□□ -1.16
SF3A3-201ENST00000373019 KIR2DS5A0A0G2JLQ3 304 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 A0A0G2JNG1 304 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 F8W1H4 67 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 KIR2DS3K7RE56 304 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 IGHV4-34P06331 123 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 KIR2DS5Q14953 304 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 TRAT1Q6PIZ9 186 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 DEFB124Q8NES8 71 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 PHLDA1Q8WV24 401 aaPredicted RBP7.81□□□□□ -1.16
SF3A3-201ENST00000373019 ARPC1AQ92747 370 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 DPF1Q92782 380 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 GRAMD2BQ96HH9 432 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 UCN2Q96RP3 112 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 FGF21Q9NSA1 209 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 EML6Q6ZMW3 1958 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 DHRS13Q6UX07 377 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 SLC22A18ASQ8N1D0 253 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 OR10D3Q8NH80 312 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 DDB2Q92466 427 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 ANKRD11Q6UB99 2663 aaPredicted RBP7.81□□□□□ -1.16
SF3A3-201ENST00000373019 A1L4Q6 167 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 J3QR89 54 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 RBMXL2O75526 392 aaKnown RBP7.81□□□□□ -1.16
SF3A3-201ENST00000373019 C20orf78Q9BR46 151 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 ZNF747Q9BV97 191 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 CDIP1Q9H305 208 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 KLRF1Q9NZS2 232 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 ERG28Q9UKR5 140 aa7.81□□□□□ -1.16
SF3A3-201ENST00000373019 DMXL1Q9Y485 3027 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 J3KRW8 73 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 SMAD7O15105 426 aaKnown RBP7.8□□□□□ -1.16
SF3A3-201ENST00000373019 ZNHIT1O43257 154 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 ACTL6BO94805 426 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 TCTAP57738 103 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 DEFB133Q30KQ1 61 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 H2BFWTQ7Z2G1 175 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 ATP5L2Q7Z4Y8 100 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 HEYLQ9NQ87 328 aaPredicted RBP7.8□□□□□ -1.16
SF3A3-201ENST00000373019 LINC00312Q9Y6C7 94 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 KBTBD11-OT1A0A1B0GTJ5 212 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 FNDC10F2Z333 226 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 MGST3O14880 152 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 218.9 ms