RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 MSMPQ1L6U9 139 aa8.84□□□□□ -0.99
LCN2-202ENST00000372998 PVRIGQ6DKI7 326 aa8.84□□□□□ -0.99
LCN2-202ENST00000372998 ZNF329Q86UD4 541 aa8.84□□□□□ -0.99
LCN2-202ENST00000372998 LEAP2Q969E1 77 aa8.84□□□□□ -0.99
LCN2-202ENST00000372998 RNF5Q99942 180 aa8.84□□□□□ -0.99
LCN2-202ENST00000372998 MRPL20Q9BYC9 149 aaKnown RBP8.84□□□□□ -0.99
LCN2-202ENST00000372998 RNASE7Q9H1E1 156 aaKnown RBP8.84□□□□□ -0.99
LCN2-202ENST00000372998 ZNF355PQ9NSJ1 428 aa8.84□□□□□ -0.99
LCN2-202ENST00000372998 C1RLQ9NZP8 487 aa8.84□□□□□ -0.99
LCN2-202ENST00000372998 KAAG1Q9UBP8 84 aa8.84□□□□□ -0.99
LCN2-202ENST00000372998 EPDR1Q9UM22 224 aa8.84□□□□□ -0.99
LCN2-202ENST00000372998 KLF12Q9Y4X4 402 aa8.84□□□□□ -0.99
LCN2-202ENST00000372998 YLPM1P49750 1951 aaKnown RBP8.84□□□□□ -0.99
LCN2-202ENST00000372998 IGKV1OR2-108A0A075B7D4 117 aa8.83□□□□□ -1
LCN2-202ENST00000372998 TRBV6-1A0A0K0K1D8 114 aa8.83□□□□□ -1
LCN2-202ENST00000372998 C16orf97H3BN30 126 aa8.83□□□□□ -1
LCN2-202ENST00000372998 BMPR1BO00238 502 aa8.83□□□□□ -1
LCN2-202ENST00000372998 DLEU1O43261 78 aa8.83□□□□□ -1
LCN2-202ENST00000372998 OR5AL1P0C617 328 aa8.83□□□□□ -1
LCN2-202ENST00000372998 ZNF25P17030 456 aaPredicted RBP8.83□□□□□ -1
LCN2-202ENST00000372998 LINC00310P59036 64 aa8.83□□□□□ -1
LCN2-202ENST00000372998 SPATA45Q537H7 98 aa8.83□□□□□ -1
LCN2-202ENST00000372998 C1orf229Q6ZS94 237 aaPredicted RBP8.83□□□□□ -1
LCN2-202ENST00000372998 FAM216BQ8N7L0 139 aa8.83□□□□□ -1
LCN2-202ENST00000372998 C5orf17Q8NAS9 161 aa8.83□□□□□ -1
LCN2-202ENST00000372998 DEFB108BQ8NET1 73 aa8.83□□□□□ -1
LCN2-202ENST00000372998 CHCHD1Q96BP2 118 aaKnown RBP8.83□□□□□ -1
LCN2-202ENST00000372998 GPR82Q96P67 336 aa8.83□□□□□ -1
LCN2-202ENST00000372998 MRPS16Q9Y3D3 137 aaKnown RBP8.83□□□□□ -1
LCN2-202ENST00000372998 PAM16Q9Y3D7 125 aa8.83□□□□□ -1
LCN2-202ENST00000372998 DYSFO75923 2080 aa8.82□□□□□ -1
LCN2-202ENST00000372998 UNC80Q8N2C7 3258 aa8.82□□□□□ -1
LCN2-202ENST00000372998 A0A1B0GW15 77 aa8.82□□□□□ -1
LCN2-202ENST00000372998 SRRM4A7MD48 611 aaKnown RBP8.82□□□□□ -1
LCN2-202ENST00000372998 HYPMO75409 117 aa8.82□□□□□ -1
LCN2-202ENST00000372998 FSTL3O95633 263 aa8.82□□□□□ -1
LCN2-202ENST00000372998 TOMM40O96008 361 aa8.82□□□□□ -1
LCN2-202ENST00000372998 IGHV3-7P01780 117 aa8.82□□□□□ -1
LCN2-202ENST00000372998 RBP4P02753 201 aa8.82□□□□□ -1
LCN2-202ENST00000372998 IGKV1-16P04430 117 aa8.82□□□□□ -1
LCN2-202ENST00000372998 CRYGCP07315 174 aa8.82□□□□□ -1
LCN2-202ENST00000372998 HNRNPA3P51991 378 aaKnown RBP8.82□□□□□ -1
LCN2-202ENST00000372998 DAZAP1Q96EP5 407 aaKnown RBP8.82□□□□□ -1
LCN2-202ENST00000372998 WFIKKN1Q96NZ8 548 aa8.82□□□□□ -1
LCN2-202ENST00000372998 TXN2Q99757 166 aa8.82□□□□□ -1
LCN2-202ENST00000372998 ATG101Q9BSB4 218 aa8.82□□□□□ -1
LCN2-202ENST00000372998 FBXL7Q9UJT9 491 aa8.82□□□□□ -1
LCN2-202ENST00000372998 GOLT1BQ9Y3E0 138 aa8.82□□□□□ -1
LCN2-202ENST00000372998 FAM215AQ9Y5M1 114 aa8.82□□□□□ -1
LCN2-202ENST00000372998 DSCAMO60469 2012 aa8.81□□□□□ -1
LCN2-202ENST00000372998 TMEM178BH3BS89 294 aa8.81□□□□□ -1
LCN2-202ENST00000372998 PRRG2O14669 202 aa8.81□□□□□ -1
LCN2-202ENST00000372998 SLC25A5P05141 298 aaKnown RBP8.81□□□□□ -1
LCN2-202ENST00000372998 BTF3P20290 206 aaKnown RBP8.81□□□□□ -1
LCN2-202ENST00000372998 CHRNB4P30926 498 aa8.81□□□□□ -1
LCN2-202ENST00000372998 S100A7P31151 101 aa8.81□□□□□ -1
LCN2-202ENST00000372998 MYCNOSP40205 109 aa8.81□□□□□ -1
LCN2-202ENST00000372998 CTRLP40313 264 aa8.81□□□□□ -1
LCN2-202ENST00000372998 RPL27AP46776 148 aaKnown RBP8.81□□□□□ -1
LCN2-202ENST00000372998 REG1BP48304 166 aa8.81□□□□□ -1
LCN2-202ENST00000372998 MFAP2P55001 183 aa8.81□□□□□ -1
LCN2-202ENST00000372998 HBBP68871 147 aa8.81□□□□□ -1
LCN2-202ENST00000372998 HOXA4Q00056 320 aaPredicted RBP8.81□□□□□ -1
LCN2-202ENST00000372998 FXYD3Q14802 87 aa8.81□□□□□ -1
LCN2-202ENST00000372998 TMEM200BQ69YZ2 307 aa8.81□□□□□ -1
LCN2-202ENST00000372998 MRPL54Q6P161 138 aaKnown RBP8.81□□□□□ -1
LCN2-202ENST00000372998 LINC00305Q7Z4B0 112 aa8.81□□□□□ -1
LCN2-202ENST00000372998 DMRTC2Q8IXT2 367 aaPredicted RBP8.81□□□□□ -1
LCN2-202ENST00000372998 NHLRC2Q8NBF2 726 aa8.81□□□□□ -1
LCN2-202ENST00000372998 NUDT10Q8NFP7 164 aa8.81□□□□□ -1
LCN2-202ENST00000372998 C18orf32Q8TCD1 76 aa8.81□□□□□ -1
LCN2-202ENST00000372998 NPIPB3Q92617 1050 aa8.81□□□□□ -1
LCN2-202ENST00000372998 FXYD5Q96DB9 178 aa8.81□□□□□ -1
LCN2-202ENST00000372998 NUDT11Q96G61 164 aa8.81□□□□□ -1
LCN2-202ENST00000372998 RPP21Q9H633 154 aaKnown RBP8.81□□□□□ -1
LCN2-202ENST00000372998 TNFRSF19Q9NS68 423 aa8.81□□□□□ -1
LCN2-202ENST00000372998 TMEM14CQ9P0S9 112 aa8.81□□□□□ -1
LCN2-202ENST00000372998 ZFP30Q9Y2G7 519 aa8.81□□□□□ -1
LCN2-202ENST00000372998 XIRP2A4UGR9 3374 aa8.8□□□□□ -1
LCN2-202ENST00000372998 A0A1B0GUS0 222 aa8.8□□□□□ -1
LCN2-202ENST00000372998 K7EQM0 130 aa8.8□□□□□ -1
LCN2-202ENST00000372998 NBEAP1P0C6P0 100 aa8.8□□□□□ -1
LCN2-202ENST00000372998 C3orf79P0CE67 100 aa8.8□□□□□ -1
LCN2-202ENST00000372998 CDKN1AP38936 164 aa8.8□□□□□ -1
LCN2-202ENST00000372998 PLA2G5P39877 138 aa8.8□□□□□ -1
LCN2-202ENST00000372998 CASP6P55212 293 aa8.8□□□□□ -1
LCN2-202ENST00000372998 MMDQ15546 238 aa8.8□□□□□ -1
LCN2-202ENST00000372998 ALKBH2Q6NS38 261 aa8.8□□□□□ -1
LCN2-202ENST00000372998 TMEM116Q8NCL8 245 aa8.8□□□□□ -1
LCN2-202ENST00000372998 DEFB124Q8NES8 71 aa8.8□□□□□ -1
LCN2-202ENST00000372998 NUP35Q8NFH5 326 aa8.8□□□□□ -1
LCN2-202ENST00000372998 OR10W1Q8NGF6 305 aa8.8□□□□□ -1
LCN2-202ENST00000372998 OR2D3Q8NGH3 330 aa8.8□□□□□ -1
LCN2-202ENST00000372998 OR2T6Q8NHC8 308 aa8.8□□□□□ -1
LCN2-202ENST00000372998 C8orf46Q8TAG6 207 aa8.8□□□□□ -1
LCN2-202ENST00000372998 ST6GALNAC6Q969X2 333 aa8.8□□□□□ -1
LCN2-202ENST00000372998 SNRNP40Q96DI7 357 aaKnown RBP8.8□□□□□ -1
LCN2-202ENST00000372998 FAM103A1Q9BTL3 118 aaKnown RBP8.8□□□□□ -1
LCN2-202ENST00000372998 OTORQ9NRC9 128 aa8.8□□□□□ -1
LCN2-202ENST00000372998 INTS1Q8N201 2190 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms