RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 TRAV9-2A0A087WT02 112 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 IGHV2-26A0A0B4J1V2 119 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 IGHV2OR16-5A0A0B4J2B6 119 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 IGHV1-18A0A0C4DH31 117 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 M0QZ24 198 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 IGHG3P01860 377 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 IGKV1-16P04430 117 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 CD24P25063 80 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 GUSBP1Q15486 140 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 MSMPQ1L6U9 139 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 ANKRD39Q53RE8 183 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 NUP35Q8NFH5 326 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 SLC25A33Q9BSK2 321 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 MGST3O14880 152 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 IGHV3-48P01763 117 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 TAS2R45P59539 299 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 RNF151Q2KHN1 245 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 DUX4L9Q6RFH8 374 aaPredicted RBP12.06□□□□□ -0.48
COL9A2-202ENST00000372748 OR4F17Q8NGA8 305 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 OR10W1Q8NGF6 305 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 TNFRSF19Q9NS68 423 aa12.06□□□□□ -0.48
COL9A2-202ENST00000372748 SMG1Q96Q15 3661 aaKnown RBP12.06□□□□□ -0.48
COL9A2-202ENST00000372748 C8orf88P0DMB2 117 aa12.05□□□□□ -0.48
COL9A2-202ENST00000372748 VHLLQ6RSH7 139 aa12.05□□□□□ -0.48
COL9A2-202ENST00000372748 SNRNP40Q96DI7 357 aaKnown RBP12.05□□□□□ -0.48
COL9A2-202ENST00000372748 LOXL4Q96JB6 756 aa12.05□□□□□ -0.48
COL9A2-202ENST00000372748 ALKBH7Q9BT30 221 aaPredicted RBP12.05□□□□□ -0.48
COL9A2-202ENST00000372748 MRPL27Q9P0M9 148 aaKnown RBP12.05□□□□□ -0.48
COL9A2-202ENST00000372748 ARL2-SNX15V9GYD0 113 aa12.05□□□□□ -0.48
COL9A2-202ENST00000372748 A0A1W2PRE2 83 aa12.05□□□□□ -0.48
COL9A2-202ENST00000372748 CORTO00230 105 aa12.05□□□□□ -0.48
COL9A2-202ENST00000372748 UBE2G1P62253 170 aa12.05□□□□□ -0.48
COL9A2-202ENST00000372748 GCSAMQ8N6F7 178 aa12.05□□□□□ -0.48
COL9A2-202ENST00000372748 OR8B2Q96RD0 313 aa12.05□□□□□ -0.48
COL9A2-202ENST00000372748 AMMECR1Q9Y4X0 333 aaPredicted RBP12.05□□□□□ -0.48
COL9A2-202ENST00000372748 SRRM4A7MD48 611 aaKnown RBP12.04□□□□□ -0.48
COL9A2-202ENST00000372748 F2RL2O00254 374 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 KIR2DS2P43631 304 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 NUDT10Q8NFP7 164 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 OR2T6Q8NHC8 308 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 NUDT11Q96G61 164 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 C2orf70A6NJV1 201 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 TOMM40O96008 361 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 FOXA3P55318 350 aaPredicted RBP12.04□□□□□ -0.48
COL9A2-202ENST00000372748 FBLN7Q53RD9 439 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 OR4C5Q8NGB2 326 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 OR2D3Q8NGH3 330 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 SPAARA0A1B0GVQ0 90 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 IGLC7A0M8Q6 106 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 HIGD1CA8MV81 97 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 VWC2LB2RUY7 222 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 H0YJW9 148 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 SSBP2P81877 361 aaPredicted RBP12.04□□□□□ -0.48
COL9A2-202ENST00000372748 C17orf58Q2M2W7 97 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 LHFPL4Q7Z7J7 247 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 OR8B3Q8NGG8 313 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 SLC25A2Q9BXI2 301 aa12.04□□□□□ -0.48
COL9A2-202ENST00000372748 SRRM5B3KS81 715 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 PLAUP00749 431 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 GNG5P63218 68 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 VAMP3Q15836 100 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 RND1Q92730 232 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 FAM167A-AS1Q96KT0 104 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 SAP30LQ9HAJ7 183 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 RNF24Q9Y225 148 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 MGAQ8IWI9 3026 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 TNFSF4P23510 183 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 PRCDQ00LT1 54 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 TBR1Q16650 682 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 MPV17L2Q567V2 206 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 MOGAT3Q86VF5 341 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 DEFB124Q8NES8 71 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 PPP1R35Q8TAP8 253 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 COMMD5Q9GZQ3 224 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 GAL3ST2Q9H3Q3 398 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 CACNA1GO43497 2377 aa12.03□□□□□ -0.48
COL9A2-202ENST00000372748 IGHV1-69-2A0A0G2JMI3 117 aa12.02□□□□□ -0.48
COL9A2-202ENST00000372748 PRR33A8MZF0 331 aa12.02□□□□□ -0.48
COL9A2-202ENST00000372748 CA7P43166 264 aa12.02□□□□□ -0.48
COL9A2-202ENST00000372748 LINC00173Q6ZV60 143 aa12.02□□□□□ -0.48
COL9A2-202ENST00000372748 SARAFQ96BY9 339 aa12.02□□□□□ -0.48
COL9A2-202ENST00000372748 MBD6Q96DN6 1003 aa12.02□□□□□ -0.48
COL9A2-202ENST00000372748 ZNF71Q9NQZ8 489 aaPredicted RBP12.02□□□□□ -0.48
COL9A2-202ENST00000372748 TEX50A0A1B0GTY4 177 aa12.02□□□□□ -0.49
COL9A2-202ENST00000372748 MUC15Q8N387 334 aa12.02□□□□□ -0.49
COL9A2-202ENST00000372748 OR5B3Q8NH48 314 aa12.02□□□□□ -0.49
COL9A2-202ENST00000372748 PLSCR4Q9NRQ2 329 aa12.02□□□□□ -0.49
COL9A2-202ENST00000372748 DKK4Q9UBT3 224 aa12.02□□□□□ -0.49
COL9A2-202ENST00000372748 PRNDQ9UKY0 176 aa12.02□□□□□ -0.49
COL9A2-202ENST00000372748 RPH3ALQ9UNE2 315 aa12.02□□□□□ -0.49
COL9A2-202ENST00000372748 PROCRQ9UNN8 238 aa12.02□□□□□ -0.49
COL9A2-202ENST00000372748 DMXL2Q8TDJ6 3036 aa12.02□□□□□ -0.49
COL9A2-202ENST00000372748 SPRY3O43610 288 aa12.01□□□□□ -0.49
COL9A2-202ENST00000372748 DEFB109BQ30KR1 87 aa12.01□□□□□ -0.49
COL9A2-202ENST00000372748 ETFRF1Q6IPR1 90 aa12.01□□□□□ -0.49
COL9A2-202ENST00000372748 BHLHA15Q7RTS1 189 aaPredicted RBP12.01□□□□□ -0.49
COL9A2-202ENST00000372748 DEFB108BQ8NET1 73 aa12.01□□□□□ -0.49
COL9A2-202ENST00000372748 URB1-AS1Q96HZ7 61 aa12.01□□□□□ -0.49
COL9A2-202ENST00000372748 OR2V2Q96R30 315 aa12.01□□□□□ -0.49
COL9A2-202ENST00000372748 MCRIP2Q9BUT9 160 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms