RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CLEC7AQ9BXN2 247 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 PARLQ9H300 379 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 SAV1Q9H4B6 383 aaPredicted RBP11.33□□□□□ -0.6
LDB3-204ENST00000372066 CUBNO60494 3623 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 ZNF98A6NK75 572 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 IGLV2-23P01705 113 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 REG1BP48304 166 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 PDLIM4P50479 330 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 CTAG1AP78358 180 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 ELOBQ15370 118 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 C1orf159Q96HA4 380 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 PPIAL4CA0A0B4J2A2 164 aa11.32□□□□□ -0.6
LDB3-204ENST00000372066 CLN5O75503 358 aa11.32□□□□□ -0.6
LDB3-204ENST00000372066 S100A6P06703 90 aa11.32□□□□□ -0.6
LDB3-204ENST00000372066 LIPFP07098 398 aa11.32□□□□□ -0.6
LDB3-204ENST00000372066 PPIAL4GP0DN37 164 aa11.32□□□□□ -0.6
LDB3-204ENST00000372066 MYOD1P15172 320 aa11.32□□□□□ -0.6
LDB3-204ENST00000372066 KRTAP24-1Q3LI83 254 aa11.32□□□□□ -0.6
LDB3-204ENST00000372066 MMD2Q8IY49 270 aa11.32□□□□□ -0.6
LDB3-204ENST00000372066 LY6G5BQ8NDX9 201 aa11.32□□□□□ -0.6
LDB3-204ENST00000372066 RNF2Q99496 336 aa11.32□□□□□ -0.6
LDB3-204ENST00000372066 RNF5Q99942 180 aa11.32□□□□□ -0.6
LDB3-204ENST00000372066 CHODLQ9H9P2 273 aa11.32□□□□□ -0.6
LDB3-204ENST00000372066 PATZ1Q9HBE1 687 aaKnown RBP11.32□□□□□ -0.6
LDB3-204ENST00000372066 SLC45A2Q9UMX9 530 aa11.32□□□□□ -0.6
LDB3-204ENST00000372066 TNCP24821 2201 aa11.31□□□□□ -0.6
LDB3-204ENST00000372066 ARL14EPLP0DKL9 152 aa11.31□□□□□ -0.6
LDB3-204ENST00000372066 SRD5A1P18405 259 aa11.31□□□□□ -0.6
LDB3-204ENST00000372066 GCSAMLQ5JQS6 135 aa11.31□□□□□ -0.6
LDB3-204ENST00000372066 SLC16A13Q7RTY0 426 aa11.31□□□□□ -0.6
LDB3-204ENST00000372066 SSMEM1Q8WWF3 244 aa11.31□□□□□ -0.6
LDB3-204ENST00000372066 RPUSD4Q96CM3 377 aaKnown RBP11.31□□□□□ -0.6
LDB3-204ENST00000372066 PIMREGQ9BSJ6 248 aa11.31□□□□□ -0.6
LDB3-204ENST00000372066 BUB1B-PAK6H3BSN5 160 aa11.3□□□□□ -0.6
LDB3-204ENST00000372066 S100A8P05109 93 aa11.3□□□□□ -0.6
LDB3-204ENST00000372066 RPL23P62829 140 aaKnown RBP11.3□□□□□ -0.6
LDB3-204ENST00000372066 SSX2Q16385 188 aa11.3□□□□□ -0.6
LDB3-204ENST00000372066 IL17RELQ6ZVW7 336 aa11.3□□□□□ -0.6
LDB3-204ENST00000372066 Q8WTZ3 238 aa11.3□□□□□ -0.6
LDB3-204ENST00000372066 ANAPC16Q96DE5 110 aa11.3□□□□□ -0.6
LDB3-204ENST00000372066 ZNF430Q9H8G1 570 aaPredicted RBP11.3□□□□□ -0.6
LDB3-204ENST00000372066 DOK5Q9P104 306 aa11.3□□□□□ -0.6
LDB3-204ENST00000372066 TRBV24-1A0A075B6N3 115 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 VWC2LB2RUY7 222 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 NDUFS8O00217 210 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 LINC00869P0C866 280 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 GCHFRP30047 84 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 TAS2R45P59539 299 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 SRSF2Q01130 221 aaKnown RBP11.29□□□□□ -0.6
LDB3-204ENST00000372066 GAMTQ14353 236 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 ADIRFQ15847 76 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 ZNF674Q2M3X9 581 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 FAM120AOSQ5T036 256 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 ETFRF1Q6IPR1 90 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 ZFP82Q8N141 532 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 ZNF114Q8NC26 417 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 OR4P4Q8NGL7 312 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 GATAD1Q8WUU5 269 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 TCEAL7Q9BRU2 100 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 MRPL32Q9BYC8 188 aaKnown RBP11.29□□□□□ -0.6
LDB3-204ENST00000372066 TMEM167BQ9NRX6 74 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 FUT9Q9Y231 359 aa11.29□□□□□ -0.6
LDB3-204ENST00000372066 IGHV1-3A0A0C4DH29 117 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 C5orf52A6NGY3 159 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 LYNX1G3V0Z9 82 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 M0R1W7 72 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 UBE2CO00762 179 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 SLC25A17O43808 307 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 EIF3GO75821 320 aaKnown RBP eCLIP11.28□□□□□ -0.6
LDB3-204ENST00000372066 LYNX1P0DP58 116 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 RPS10P46783 165 aaKnown RBP11.28□□□□□ -0.6
LDB3-204ENST00000372066 COMPP49747 757 aaPredicted RBP11.28□□□□□ -0.6
LDB3-204ENST00000372066 PAX2Q02962 417 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 DIAPH2-AS1Q14236 149 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 PQLC2Q6ZP29 291 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 C2CD4CQ8TF44 421 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 ABHD5Q8WTS1 349 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 TECRQ9NZ01 308 aaKnown RBP11.28□□□□□ -0.6
LDB3-204ENST00000372066 METTL1Q9UBP6 276 aaKnown RBP11.28□□□□□ -0.6
LDB3-204ENST00000372066 INSIG2Q9Y5U4 225 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 IGHV4-61A0A0C4DH41 118 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 CORTO00230 105 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 TGFAP01135 160 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 CRYGBP07316 175 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 OR5G3P0C626 314 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 DEFA4P12838 97 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 AREGP15514 252 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 HNF1AP20823 631 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 S100PP25815 95 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 SELENOTP62341 195 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 CST9LP1Q5W188 147 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 PVRIGQ6DKI7 326 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 OR10W1Q8NGF6 305 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 RPEQ96AT9 228 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 BTF3L4Q96K17 158 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 UHRF2Q96PU4 802 aa11.28□□□□□ -0.6
LDB3-204ENST00000372066 CGB1A6NKQ9 187 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 H7BYZ3 331 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 HAX1O00165 279 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 PPP1R2P9O14990 202 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms