RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 LRRC75A-AS1Q8N1F1 130 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 C10orf35Q96D05 121 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 CHRDL1Q9BU40 450 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 TMEM160Q9NX00 188 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 JPT1Q9UK76 154 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 AMMECR1Q9Y4X0 333 aaPredicted RBP5.69□□□□□ -1.5
USP1-202ENST00000371146 A0A0A6YYD4 124 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 J3QRE1 110 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 K7EQM0 130 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 CREBL2O60519 120 aaPredicted RBP5.69□□□□□ -1.5
USP1-202ENST00000371146 CD74P04233 296 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 IAPPP10997 89 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 LPAR6P43657 344 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 HLA-DRB3P79483 266 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 PDZD11Q5EBL8 140 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 MRAP2Q96G30 205 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 MDFIQ99750 246 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 ANXA10Q9UJ72 324 aa5.69□□□□□ -1.5
USP1-202ENST00000371146 LSM5Q9Y4Y9 91 aaKnown RBP5.69□□□□□ -1.5
USP1-202ENST00000371146 A0A087WWC5 75 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 TRBV5-7A0A0A0MS05 114 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 IGHV3-66A0A0C4DH42 116 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 RAB29O14966 203 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 LANCL1O43813 399 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 SRSF10O75494 262 aaKnown RBP5.68□□□□□ -1.5
USP1-202ENST00000371146 VDAC1P21796 283 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 TPPP2P59282 170 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 CT45A1Q5HYN5 189 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 ZBTB34Q8NCN2 500 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 CT45A3Q8NHU0 189 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 SDSLQ96GA7 329 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 PRSS22Q9GZN4 317 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 SAA2-SAA4A0A096LPE2 208 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 A0A1B0GV50 99 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 NAP1L6A6NFF2 107 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 ZNF737O75373 536 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 OR2C1O95371 312 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 TRGC1P0CF51 173 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 SAA2P0DJI9 122 aaPredicted RBP5.68□□□□□ -1.5
USP1-202ENST00000371146 FGF9P31371 208 aaPredicted RBP5.68□□□□□ -1.5
USP1-202ENST00000371146 FAM71F2Q6NXP2 309 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 NIT1Q86X76 327 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 Q8N7P7 452 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 OR5AU1Q8NGC0 362 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 P2RX4Q99571 388 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 SIGMAR1Q99720 223 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 PDE6DO43924 150 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 CSF1P09603 554 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 GATA4P43694 442 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 RPL32P62910 135 aaKnown RBP5.68□□□□□ -1.5
USP1-202ENST00000371146 FXYD3Q14802 87 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 SRSF7Q16629 238 aaKnown RBP eCLIP5.68□□□□□ -1.5
USP1-202ENST00000371146 HAPLN4Q86UW8 402 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 SGPP2Q8IWX5 399 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 DYNAPQ8N1N2 210 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 TMEM217Q8N7C4 229 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 STPG4Q8N801 248 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 RTN4IP1Q8WWV3 396 aaPredicted RBP5.68□□□□□ -1.5
USP1-202ENST00000371146 ACY3Q96HD9 319 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 GFI1Q99684 422 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 C1RLQ9NZP8 487 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 RFNGQ9Y644 331 aa5.68□□□□□ -1.5
USP1-202ENST00000371146 OR2J3O76001 311 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 RBP4P02753 201 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 CD55P08174 381 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 SLC25A4P12235 298 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 IL13RA2Q14627 380 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 C3orf36Q3SXR2 165 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 TMEM42Q69YG0 159 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 Q6P435 159 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 Q6ZS46 218 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 KLHDC1Q8N7A1 406 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 KLHL30-AS1Q8NEE0 82 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 TRAV1-2A0A0B4J238 106 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 TMEM213A2RRL7 107 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 MSGN1A6NI15 193 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 E5RGE8 158 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 PPYP01298 95 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 IGKV1-16P04430 117 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 AZU1P20160 251 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 ZNF134P52741 427 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 ZNF146Q15072 292 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 VMA21Q3ZAQ7 101 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 Q56UQ5 140 aa5.67□□□□□ -1.5
USP1-202ENST00000371146 MRPL30Q8TCC3 161 aaKnown RBP5.67□□□□□ -1.5
USP1-202ENST00000371146 CIB3Q96Q77 187 aaPredicted RBP5.67□□□□□ -1.5
USP1-202ENST00000371146 TRGV3P03979 118 aa5.66□□□□□ -1.5
USP1-202ENST00000371146 SMIM17P0DL12 118 aa5.66□□□□□ -1.5
USP1-202ENST00000371146 ESDP10768 282 aa5.66□□□□□ -1.5
USP1-202ENST00000371146 HOXB4P17483 251 aaPredicted RBP5.66□□□□□ -1.5
USP1-202ENST00000371146 CCL1P22362 96 aa5.66□□□□□ -1.5
USP1-202ENST00000371146 OR4X2Q8NGF9 303 aa5.66□□□□□ -1.5
USP1-202ENST00000371146 TMEM18Q96B42 140 aa5.66□□□□□ -1.5
USP1-202ENST00000371146 SMIM3Q9BZL3 60 aa5.66□□□□□ -1.5
USP1-202ENST00000371146 TMEM231Q9H6L2 316 aa5.66□□□□□ -1.5
USP1-202ENST00000371146 IGKV1D-13A0A0B4J2D9 117 aa5.66□□□□□ -1.5
USP1-202ENST00000371146 IGSF23A1L1A6 192 aa5.66□□□□□ -1.5
USP1-202ENST00000371146 BUB1B-PAK6H3BSN5 160 aa5.66□□□□□ -1.5
USP1-202ENST00000371146 FCN1O00602 326 aa5.66□□□□□ -1.5
USP1-202ENST00000371146 TNFRSF13BO14836 293 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms