RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ZNF705BP0CI00 300 aaPredicted RBP11.99□□□□□ -0.49
LMO4-201ENST00000370542 GZMHP20718 246 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 SAA4P35542 130 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 DLX1P56177 255 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 SLC38A11Q08AI6 406 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 TMEM267Q0VDI3 215 aaPredicted RBP11.99□□□□□ -0.49
LMO4-201ENST00000370542 KLRD1Q13241 179 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 TEX43Q6ZNM6 134 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 C11orf42Q8N5U0 333 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 TCTEX1D1Q8N7M0 179 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 ZNF709Q8N972 641 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 ZNRF1Q8ND25 227 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 OR10J5Q8NHC4 309 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 H1FXQ92522 213 aaKnown RBP11.99□□□□□ -0.49
LMO4-201ENST00000370542 CYYR1Q96J86 154 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 CIB3Q96Q77 187 aaPredicted RBP11.99□□□□□ -0.49
LMO4-201ENST00000370542 TMEM208Q9BTX3 173 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 MEGF9Q9H1U4 602 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 HPRT1P00492 218 aa11.98□□□□□ -0.49
LMO4-201ENST00000370542 KRASP01116 189 aa11.98□□□□□ -0.49
LMO4-201ENST00000370542 G0S2P27469 103 aa11.98□□□□□ -0.49
LMO4-201ENST00000370542 SELENOTP62341 195 aa11.98□□□□□ -0.49
LMO4-201ENST00000370542 COL5A1-AS1Q5SY13 56 aa11.98□□□□□ -0.49
LMO4-201ENST00000370542 TEX38Q6PEX7 206 aa11.98□□□□□ -0.49
LMO4-201ENST00000370542 TMEM14EPQ6UXP3 125 aa11.98□□□□□ -0.49
LMO4-201ENST00000370542 ACP7Q6ZNF0 438 aa11.98□□□□□ -0.49
LMO4-201ENST00000370542 TMEM144Q7Z5S9 345 aa11.98□□□□□ -0.49
LMO4-201ENST00000370542 OR10V1Q8NGI7 309 aa11.98□□□□□ -0.49
LMO4-201ENST00000370542 RPUSD4Q96CM3 377 aaKnown RBP11.98□□□□□ -0.49
LMO4-201ENST00000370542 OR4C12Q96R67 309 aa11.98□□□□□ -0.49
LMO4-201ENST00000370542 HES4Q9HCC6 221 aa11.98□□□□□ -0.49
LMO4-201ENST00000370542 KCNIP2Q9NS61 270 aa11.98□□□□□ -0.49
LMO4-201ENST00000370542 FGF8P55075 233 aaPredicted RBP11.97□□□□□ -0.49
LMO4-201ENST00000370542 PRB3Q04118 309 aaPredicted RBP11.97□□□□□ -0.49
LMO4-201ENST00000370542 ZNF705AQ6ZN79 300 aaPredicted RBP11.97□□□□□ -0.49
LMO4-201ENST00000370542 PNKDQ8N490 385 aa11.97□□□□□ -0.49
LMO4-201ENST00000370542 OR4B1Q8NGF8 309 aa11.97□□□□□ -0.49
LMO4-201ENST00000370542 CMTM2Q8TAZ6 248 aa11.97□□□□□ -0.49
LMO4-201ENST00000370542 OR4F4Q96R69 305 aa11.97□□□□□ -0.49
LMO4-201ENST00000370542 CACNG5Q9UF02 275 aa11.97□□□□□ -0.49
LMO4-201ENST00000370542 J3QT63 122 aa11.96□□□□□ -0.49
LMO4-201ENST00000370542 SCTP09683 121 aa11.96□□□□□ -0.49
LMO4-201ENST00000370542 GABRA2P47869 451 aa11.96□□□□□ -0.49
LMO4-201ENST00000370542 ERVK11-1P61568 191 aa11.96□□□□□ -0.49
LMO4-201ENST00000370542 CD177Q8N6Q3 437 aa11.96□□□□□ -0.49
LMO4-201ENST00000370542 NECAP1Q8NC96 275 aa11.96□□□□□ -0.49
LMO4-201ENST00000370542 OR10G9Q8NGN4 311 aa11.96□□□□□ -0.49
LMO4-201ENST00000370542 OR10G7Q8NGN6 311 aa11.96□□□□□ -0.49
LMO4-201ENST00000370542 NEK7Q8TDX7 302 aa11.96□□□□□ -0.49
LMO4-201ENST00000370542 LY96Q9Y6Y9 160 aa11.96□□□□□ -0.49
LMO4-201ENST00000370542 IGKV1D-13A0A0B4J2D9 117 aa11.95□□□□□ -0.5
LMO4-201ENST00000370542 ZNF320A2RRD8 509 aa11.95□□□□□ -0.5
LMO4-201ENST00000370542 SYNGR1O43759 233 aa11.95□□□□□ -0.5
LMO4-201ENST00000370542 IGKV1-13P0DP09 117 aa11.95□□□□□ -0.5
LMO4-201ENST00000370542 IL3RAP26951 378 aa11.95□□□□□ -0.5
LMO4-201ENST00000370542 ELLP55199 621 aaPredicted RBP11.95□□□□□ -0.5
LMO4-201ENST00000370542 SMIM21Q3B7S5 101 aa11.95□□□□□ -0.5
LMO4-201ENST00000370542 ANKRD39Q53RE8 183 aa11.95□□□□□ -0.5
LMO4-201ENST00000370542 DMRTC1Q5HYR2 192 aa11.95□□□□□ -0.5
LMO4-201ENST00000370542 SLC35E4Q6ICL7 350 aa11.95□□□□□ -0.5
LMO4-201ENST00000370542 CALHM1Q8IU99 346 aa11.95□□□□□ -0.5
LMO4-201ENST00000370542 VAMP8Q9BV40 100 aa11.95□□□□□ -0.5
LMO4-201ENST00000370542 KRTAP17-1Q9BYP8 105 aa11.95□□□□□ -0.5
LMO4-201ENST00000370542 VSIRQ9H7M9 311 aa11.95□□□□□ -0.5
LMO4-201ENST00000370542 A0A1W2PRD5 423 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 A0A1W2PRF3 423 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 A0A1W2PRM7 423 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 PRDX2P32119 198 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 RPL29P47914 159 aaKnown RBP11.94□□□□□ -0.5
LMO4-201ENST00000370542 DLX6P56179 175 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 Q0VG73 95 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 VWC2Q2TAL6 325 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 TMEM200BQ69YZ2 307 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 Q6ZPA2 131 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 RPP25LQ8N5L8 163 aaKnown RBP11.94□□□□□ -0.5
LMO4-201ENST00000370542 PPP1R35Q8TAP8 253 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 PIFOQ8TCI5 191 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 ATG101Q9BSB4 218 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 PKIBQ9C010 78 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 FAM234AQ9H0X4 552 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 ZFP30Q9Y2G7 519 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 POLDIP2Q9Y2S7 368 aa11.94□□□□□ -0.5
LMO4-201ENST00000370542 DSCAML1Q8TD84 2053 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 UBE2L5PA0A1B0GUS4 154 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 SLC33A1O00400 549 aaPredicted RBP11.93□□□□□ -0.5
LMO4-201ENST00000370542 MPDU1O75352 247 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 REG1AP05451 166 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 IAPPP10997 89 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 BRS3P32247 399 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 RPL31P62899 125 aaKnown RBP11.93□□□□□ -0.5
LMO4-201ENST00000370542 SPANXN5Q5MJ07 72 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 FAM78BQ5VT40 261 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 SSX7Q7RTT5 188 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 HAPLN4Q86UW8 402 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 OR10P1Q8NGE3 313 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 CFHR4Q92496 578 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 ZNF488Q96MN9 340 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 ZNF581Q9P0T4 197 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 HSPB7Q9UBY9 170 aa11.93□□□□□ -0.5
LMO4-201ENST00000370542 A0A0G2JRQ6 117 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms