RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 PINX1Q96BK5 328 aaKnown RBP8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 RAB40CQ96S21 281 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 AGMATQ9BSE5 352 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 HEYLQ9NQ87 328 aaPredicted RBP8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 ATRXP46100 2492 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 hADV38S2A0JD32 116 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 CLDN14O95500 239 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 TYMSP04818 313 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 GPX1P07203 203 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 CGB3P0DN86 165 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 CGB7P0DN87 165 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 SRIP30626 198 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 SERF2P84101 59 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 FGFRL1Q8N441 504 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 ZNF439Q8NDP4 499 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 ZDHHC16Q969W1 377 aa8.18□□□□□ -1.1
PRPF38B-203ENST00000370025 CTXND1A0A1B0GTU2 59 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 LOXL3P58215 753 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 RPL30P62888 115 aaKnown RBP8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 EIF4EBP1Q13541 118 aaPredicted RBP8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 C17orf58Q2M2W7 97 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 ZNF841Q6ZN19 808 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 LEAP2Q969E1 77 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 CSTL1Q9H114 145 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 SLC25A10Q9UBX3 287 aaPredicted RBP8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 ARL2-SNX15V9GYD0 113 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 TANC2Q9HCD6 1990 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 CHD8Q9HCK8 2581 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 IGKV1-5P01602 117 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 MUC15Q8N387 334 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 C5orf30Q96GV9 206 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 SPG11Q96JI7 2443 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 CDSNQ15517 529 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 TMEM30BQ3MIR4 351 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 SSMEM1Q8WWF3 244 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 CORO2AQ92828 525 aa8.17□□□□□ -1.1
PRPF38B-203ENST00000370025 DSCAML1Q8TD84 2053 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 IGHV1-69-2A0A0G2JMI3 117 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 C17orf98A8MV24 154 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 K7EP13 123 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 RAMP3O60896 148 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 NUDT3O95989 172 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 CA1P00915 261 aaPredicted RBP8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 CDC34P49427 236 aaPredicted RBP8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 PMCHL1Q16048 86 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 ZNF672Q499Z4 452 aaPredicted RBP8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 PDLIM3Q53GG5 364 aaPredicted RBP8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 IDI2-AS1Q9NZ38 188 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 IGHV2-70DA0A0C4DH43 119 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 NDUFB3O43676 98 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 PPOXP50336 477 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 MEF2CQ06413 473 aaPredicted RBP8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 ZNF430Q9H8G1 570 aaPredicted RBP8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 LINC00312Q9Y6C7 94 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 PLXNB1O43157 2135 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 M0R1X1 148 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 CD99P14209 185 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 LRRC10Q5BKY1 277 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 C16orf54Q6UWD8 224 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 H2BFWTQ7Z2G1 175 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 CLUHP3Q96NS8 147 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 CLEC7AQ9BXN2 247 aa8.16□□□□□ -1.1
PRPF38B-203ENST00000370025 A0A1W2PS18 150 aa8.15□□□□□ -1.1
PRPF38B-203ENST00000370025 DUTP33316 252 aaKnown RBP8.15□□□□□ -1.1
PRPF38B-203ENST00000370025 RPL31P62899 125 aaKnown RBP8.15□□□□□ -1.1
PRPF38B-203ENST00000370025 TMEM144Q7Z5S9 345 aa8.15□□□□□ -1.1
PRPF38B-203ENST00000370025 KLHDC1Q8N7A1 406 aa8.15□□□□□ -1.1
PRPF38B-203ENST00000370025 Q8N976 141 aa8.15□□□□□ -1.1
PRPF38B-203ENST00000370025 PSMG3Q9BT73 122 aaPredicted RBP8.15□□□□□ -1.1
PRPF38B-203ENST00000370025 LINC00473A8K010 186 aa8.15□□□□□ -1.1
PRPF38B-203ENST00000370025 FCGR3BO75015 233 aa8.15□□□□□ -1.1
PRPF38B-203ENST00000370025 S1PR2O95136 353 aa8.15□□□□□ -1.1
PRPF38B-203ENST00000370025 PRAMEF5Q5TYX0 476 aa8.15□□□□□ -1.1
PRPF38B-203ENST00000370025 NHLRC2Q8NBF2 726 aa8.15□□□□□ -1.1
PRPF38B-203ENST00000370025 RNASE7Q9H1E1 156 aaKnown RBP8.15□□□□□ -1.1
PRPF38B-203ENST00000370025 FAM90A26D6RGX4 464 aa8.15□□□□□ -1.11
PRPF38B-203ENST00000370025 IGHV3-48P01763 117 aa8.15□□□□□ -1.11
PRPF38B-203ENST00000370025 APELAP0DMC3 54 aa8.15□□□□□ -1.11
PRPF38B-203ENST00000370025 CTRLP40313 264 aa8.15□□□□□ -1.11
PRPF38B-203ENST00000370025 ZNF134P52741 427 aa8.15□□□□□ -1.11
PRPF38B-203ENST00000370025 PMCHL2Q9BQD1 86 aa8.15□□□□□ -1.11
PRPF38B-203ENST00000370025 QTRT1Q9BXR0 403 aaKnown RBP8.15□□□□□ -1.11
PRPF38B-203ENST00000370025 IFI27L2Q9H2X8 130 aa8.15□□□□□ -1.11
PRPF38B-203ENST00000370025 GSX1Q9H4S2 264 aaPredicted RBP8.15□□□□□ -1.11
PRPF38B-203ENST00000370025 LINC00574Q9H8X3 128 aa8.15□□□□□ -1.11
PRPF38B-203ENST00000370025 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.15□□□□□ -1.11
PRPF38B-203ENST00000370025 TECRQ9NZ01 308 aaKnown RBP8.15□□□□□ -1.11
PRPF38B-203ENST00000370025 MUC21A0A0G2JKD1 596 aa8.14□□□□□ -1.11
PRPF38B-203ENST00000370025 MUC21A0A140T8X8 626 aa8.14□□□□□ -1.11
PRPF38B-203ENST00000370025 ZG16O60844 167 aa8.14□□□□□ -1.11
PRPF38B-203ENST00000370025 IGLL1P15814 213 aa8.14□□□□□ -1.11
PRPF38B-203ENST00000370025 MUC21Q5SSG8 566 aa8.14□□□□□ -1.11
PRPF38B-203ENST00000370025 CENPVQ7Z7K6 275 aaPredicted RBP8.14□□□□□ -1.11
PRPF38B-203ENST00000370025 MMD2Q8IY49 270 aa8.14□□□□□ -1.11
PRPF38B-203ENST00000370025 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.14□□□□□ -1.11
PRPF38B-203ENST00000370025 H1FXQ92522 213 aaKnown RBP8.14□□□□□ -1.11
PRPF38B-203ENST00000370025 CLEC5AQ9NY25 188 aa8.14□□□□□ -1.11
PRPF38B-203ENST00000370025 GAGE12BA1L429 117 aa8.14□□□□□ -1.11
PRPF38B-203ENST00000370025 GNG7O60262 68 aa8.14□□□□□ -1.11
PRPF38B-203ENST00000370025 TOX4O94842 621 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms