RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 GATD1Q8NB37 220 aa10.53□□□□□ -0.72
HCFC1-202ENST00000369984 OR52E5Q8NH55 327 aa10.53□□□□□ -0.72
HCFC1-202ENST00000369984 FOXH1O75593 365 aa10.53□□□□□ -0.72
HCFC1-202ENST00000369984 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.53□□□□□ -0.72
HCFC1-202ENST00000369984 RNASE7Q9H1E1 156 aaKnown RBP10.53□□□□□ -0.72
HCFC1-202ENST00000369984 TCF20Q9UGU0 1960 aaKnown RBP10.53□□□□□ -0.72
HCFC1-202ENST00000369984 C5orf67F2Z3F1 127 aa10.53□□□□□ -0.72
HCFC1-202ENST00000369984 TM4SF5O14894 197 aa10.53□□□□□ -0.72
HCFC1-202ENST00000369984 PILRAQ9UKJ1 303 aa10.53□□□□□ -0.72
HCFC1-202ENST00000369984 A0A0G2JMZ2 1700 aa10.53□□□□□ -0.72
HCFC1-202ENST00000369984 LRRC37A2A6NM11 1700 aa10.53□□□□□ -0.72
HCFC1-202ENST00000369984 LRRC37AA6NMS7 1700 aa10.53□□□□□ -0.72
HCFC1-202ENST00000369984 SSBP2P81877 361 aaPredicted RBP10.53□□□□□ -0.72
HCFC1-202ENST00000369984 ATXN8Q156A1 80 aa10.53□□□□□ -0.72
HCFC1-202ENST00000369984 DTX1Q86Y01 620 aa10.52□□□□□ -0.72
HCFC1-202ENST00000369984 FREM1Q5H8C1 2179 aa10.52□□□□□ -0.72
HCFC1-202ENST00000369984 TRAV9-1A0A075B6T8 112 aa10.52□□□□□ -0.72
HCFC1-202ENST00000369984 TPTE2P1Q5T6R2 138 aa10.52□□□□□ -0.72
HCFC1-202ENST00000369984 ADMP35318 185 aa10.52□□□□□ -0.73
HCFC1-202ENST00000369984 RBMY1FQ15415 496 aaKnown RBP10.52□□□□□ -0.73
HCFC1-202ENST00000369984 ARPC1AQ92747 370 aa10.52□□□□□ -0.73
HCFC1-202ENST00000369984 CARHSP1Q9Y2V2 147 aaKnown RBP10.52□□□□□ -0.73
HCFC1-202ENST00000369984 PIN1P1O15428 100 aa10.52□□□□□ -0.73
HCFC1-202ENST00000369984 GTSCR1Q86UQ5 136 aa10.52□□□□□ -0.73
HCFC1-202ENST00000369984 A0A0G2JLM5 398 aa10.52□□□□□ -0.73
HCFC1-202ENST00000369984 B9A039 149 aa10.52□□□□□ -0.73
HCFC1-202ENST00000369984 C9orf153Q5TBE3 101 aa10.52□□□□□ -0.73
HCFC1-202ENST00000369984 ESDP10768 282 aa10.52□□□□□ -0.73
HCFC1-202ENST00000369984 IFI27P40305 119 aaPredicted RBP10.52□□□□□ -0.73
HCFC1-202ENST00000369984 STPG1Q5TH74 334 aa10.52□□□□□ -0.73
HCFC1-202ENST00000369984 LAMTOR3Q9UHA4 124 aa10.52□□□□□ -0.73
HCFC1-202ENST00000369984 TOMM40O96008 361 aa10.52□□□□□ -0.73
HCFC1-202ENST00000369984 CIARTQ8N365 385 aaPredicted RBP10.52□□□□□ -0.73
HCFC1-202ENST00000369984 RAMP1O60894 148 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 COX5BP10606 129 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 COX6A1P12074 109 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 HTN3P15516 51 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 IFI27L2Q9H2X8 130 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 ATP5G3P48201 142 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 FBXL7Q9UJT9 491 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 WNK1Q9H4A3 2382 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 IGHV3-64A0A075B6Q5 118 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 ZNF415Q09FC8 603 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 CLEC19AQ6UXS0 136 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 PROB1E7EW31 1015 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 CD7P09564 240 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 CDCP2Q5VXM1 449 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 GDF15Q99988 308 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 FAM57AQ8TBR7 257 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 A0A1W2PRS3 328 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 TMEM14DPA8MWL7 114 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 M0R2P5 195 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 SERF1AO75920 110 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 SPINK8P0C7L1 97 aa10.51□□□□□ -0.73
HCFC1-202ENST00000369984 FBXL15Q9H469 300 aa10.5□□□□□ -0.73
HCFC1-202ENST00000369984 DPM2O94777 84 aa10.5□□□□□ -0.73
HCFC1-202ENST00000369984 SRP19P09132 144 aaKnown RBP10.5□□□□□ -0.73
HCFC1-202ENST00000369984 HAPLN4Q86UW8 402 aa10.5□□□□□ -0.73
HCFC1-202ENST00000369984 NRN1Q9NPD7 142 aa10.5□□□□□ -0.73
HCFC1-202ENST00000369984 SMAD7O15105 426 aaKnown RBP10.5□□□□□ -0.73
HCFC1-202ENST00000369984 GFI1BQ5VTD9 330 aa10.5□□□□□ -0.73
HCFC1-202ENST00000369984 SPANXA1Q9NS26 97 aa10.5□□□□□ -0.73
HCFC1-202ENST00000369984 ACACAQ13085 2346 aa10.5□□□□□ -0.73
HCFC1-202ENST00000369984 HBDP02042 147 aa10.5□□□□□ -0.73
HCFC1-202ENST00000369984 PSCAO43653 123 aa10.5□□□□□ -0.73
HCFC1-202ENST00000369984 EVI2AP22794 236 aa10.5□□□□□ -0.73
HCFC1-202ENST00000369984 APOBEC3AP31941 199 aaPredicted RBP10.5□□□□□ -0.73
HCFC1-202ENST00000369984 SRSF1Q07955 248 aaKnown RBP eCLIP10.5□□□□□ -0.73
HCFC1-202ENST00000369984 DNAJC30Q96LL9 226 aa10.5□□□□□ -0.73
HCFC1-202ENST00000369984 ANAPC1Q9H1A4 1944 aa10.5□□□□□ -0.73
HCFC1-202ENST00000369984 OSR1Q8TAX0 266 aaPredicted RBP10.5□□□□□ -0.73
HCFC1-202ENST00000369984 ST20Q9HBF5 79 aa10.5□□□□□ -0.73
HCFC1-202ENST00000369984 IGKV1D-42A0A075B6H8 117 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 A0A0U1RRA0 63 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 MIR17HGQ75NE6 70 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 C1orf162Q8NEQ5 155 aaPredicted RBP10.49□□□□□ -0.73
HCFC1-202ENST00000369984 GLMPQ8WWB7 406 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 NRN1LQ496H8 165 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 C1orf53Q5VUE5 145 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 RTN4RL2Q86UN3 420 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 Q6ZT83 130 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 RLFQ13129 1914 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 PRR19A6NJB7 356 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 PPP1R27Q86WC6 154 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.49□□□□□ -0.73
HCFC1-202ENST00000369984 C21orf62Q9NYP8 219 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 LOC105371267A0A1B0GV96 52 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 MORN3Q6PF18 240 aaPredicted RBP10.49□□□□□ -0.73
HCFC1-202ENST00000369984 TM2D1Q9BX74 207 aa10.49□□□□□ -0.73
HCFC1-202ENST00000369984 IGHV3OR16-8A0A075B7F1 116 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 PRDM13Q9H4Q3 707 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 A8MXK9 166 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 OR4X2Q8NGF9 303 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 STHQ8IWL8 128 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 RTBDNQ9BSG5 229 aaPredicted RBP10.48□□□□□ -0.73
HCFC1-202ENST00000369984 GP6Q9HCN6 339 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 C17orf98A8MV24 154 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 C1QL2Q7Z5L3 287 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 OR9G4Q8NGQ1 327 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 NCR2O95944 276 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms