RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 FAM201AQ5SY85 155 aa13.12□□□□□ -0.31
SYNCRIP-202ENST00000369622 INO80CQ6PI98 192 aaPredicted RBP13.12□□□□□ -0.31
SYNCRIP-202ENST00000369622 ATP6V0BQ99437 205 aa13.12□□□□□ -0.31
SYNCRIP-202ENST00000369622 HCFC1P51610 2035 aa13.12□□□□□ -0.31
SYNCRIP-202ENST00000369622 TMEM265A0A087WTH1 108 aa13.12□□□□□ -0.31
SYNCRIP-202ENST00000369622 DUTP33316 252 aaKnown RBP13.12□□□□□ -0.31
SYNCRIP-202ENST00000369622 ARF6P62330 175 aa13.12□□□□□ -0.31
SYNCRIP-202ENST00000369622 ZNF718Q3SXZ3 478 aa13.12□□□□□ -0.31
SYNCRIP-202ENST00000369622 OR8B3Q8NGG8 313 aa13.12□□□□□ -0.31
SYNCRIP-202ENST00000369622 C18orf32Q8TCD1 76 aa13.12□□□□□ -0.31
SYNCRIP-202ENST00000369622 HES4Q9HCC6 221 aa13.12□□□□□ -0.31
SYNCRIP-202ENST00000369622 WDR83OSQ9Y284 106 aa13.12□□□□□ -0.31
SYNCRIP-202ENST00000369622 APCSP02743 223 aa13.11□□□□□ -0.31
SYNCRIP-202ENST00000369622 TREML4Q6UXN2 200 aa13.11□□□□□ -0.31
SYNCRIP-202ENST00000369622 Q6ZT83 130 aa13.11□□□□□ -0.31
SYNCRIP-202ENST00000369622 PLSCR4Q9NRQ2 329 aa13.11□□□□□ -0.31
SYNCRIP-202ENST00000369622 YTHDF2Q9Y5A9 579 aaKnown RBP13.11□□□□□ -0.31
SYNCRIP-202ENST00000369622 CKS1BP61024 79 aa13.11□□□□□ -0.31
SYNCRIP-202ENST00000369622 EIF4EBP1Q13541 118 aaPredicted RBP13.11□□□□□ -0.31
SYNCRIP-202ENST00000369622 OR10J3Q5JRS4 329 aa13.11□□□□□ -0.31
SYNCRIP-202ENST00000369622 UTF1Q5T230 341 aa13.11□□□□□ -0.31
SYNCRIP-202ENST00000369622 S1PR3Q99500 378 aa13.11□□□□□ -0.31
SYNCRIP-202ENST00000369622 GNB1LQ9BYB4 327 aa13.11□□□□□ -0.31
SYNCRIP-202ENST00000369622 TNCP24821 2201 aa13.11□□□□□ -0.31
SYNCRIP-202ENST00000369622 NKX2-8O15522 239 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 C12orf54Q6X4T0 127 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 DEFB108BQ8NET1 73 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 KCNIP2Q9NS61 270 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 BDP1A6H8Y1 2624 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 TEX48A0A1B0GUV7 120 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 CD5LO43866 347 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 MYOD1P15172 320 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 MC5RP33032 325 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 SPATA31B1PQ5VZV4 182 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 BHLHA15Q7RTS1 189 aaPredicted RBP13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 SSX8Q7RTT4 187 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 V9GYV3 84 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 CACNA1HO95180 2353 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 KMT2EQ8IZD2 1858 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 CD59P13987 128 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 CAMPP49913 170 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 ZNF134P52741 427 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 TMEM116Q8NCL8 245 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 MGST2Q99735 147 aa13.1□□□□□ -0.31
SYNCRIP-202ENST00000369622 LAMA5O15230 3695 aa13.09□□□□□ -0.31
SYNCRIP-202ENST00000369622 C9orf106Q8NAJ2 232 aa13.09□□□□□ -0.31
SYNCRIP-202ENST00000369622 Q8TCH9 128 aa13.09□□□□□ -0.31
SYNCRIP-202ENST00000369622 TMEM140Q9NV12 185 aa13.09□□□□□ -0.31
SYNCRIP-202ENST00000369622 ARFGEF3Q5TH69 2177 aa13.09□□□□□ -0.31
SYNCRIP-202ENST00000369622 PLCE1Q9P212 2302 aa13.09□□□□□ -0.31
SYNCRIP-202ENST00000369622 LINC00869P0C866 280 aa13.09□□□□□ -0.31
SYNCRIP-202ENST00000369622 PQLC2Q6ZP29 291 aa13.09□□□□□ -0.31
SYNCRIP-202ENST00000369622 Q8N7P7 452 aa13.09□□□□□ -0.31
SYNCRIP-202ENST00000369622 SIGMAR1Q99720 223 aa13.09□□□□□ -0.31
SYNCRIP-202ENST00000369622 TSSC4Q9Y5U2 329 aaPredicted RBP13.09□□□□□ -0.31
SYNCRIP-202ENST00000369622 C2orf70A6NJV1 201 aa13.08□□□□□ -0.32
SYNCRIP-202ENST00000369622 SPRY3O43610 288 aa13.08□□□□□ -0.32
SYNCRIP-202ENST00000369622 FOXH1O75593 365 aa13.08□□□□□ -0.32
SYNCRIP-202ENST00000369622 ADH4P08319 380 aa13.08□□□□□ -0.32
SYNCRIP-202ENST00000369622 FOXA3P55318 350 aaPredicted RBP13.08□□□□□ -0.32
SYNCRIP-202ENST00000369622 RHOBP62745 196 aa13.08□□□□□ -0.32
SYNCRIP-202ENST00000369622 GTF2H5Q6ZYL4 71 aa13.08□□□□□ -0.32
SYNCRIP-202ENST00000369622 WDR31Q8NA23 367 aa13.08□□□□□ -0.32
SYNCRIP-202ENST00000369622 OR51B2Q9Y5P1 312 aa13.08□□□□□ -0.32
SYNCRIP-202ENST00000369622 KIR2DL2P43627 348 aaPredicted RBP13.08□□□□□ -0.32
SYNCRIP-202ENST00000369622 SPRNQ5BIV9 151 aa13.08□□□□□ -0.32
SYNCRIP-202ENST00000369622 EAF1Q96JC9 268 aaPredicted RBP13.08□□□□□ -0.32
SYNCRIP-202ENST00000369622 GGTLC1Q9BX51 225 aa13.08□□□□□ -0.32
SYNCRIP-202ENST00000369622 C15orf65H3BRN8 121 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 VWC2Q2TAL6 325 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 FDCSPQ8NFU4 85 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 GUCD1Q96NT3 240 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 DCHS1Q96JQ0 3298 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 SPENQ96T58 3664 aaKnown RBP13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 IGKV1D-17A0A075B6S4 117 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 SAA2-SAA4A0A096LPE2 208 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 TM4SF20Q53R12 229 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 MOGAT3Q86VF5 341 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 TMEM70Q9BUB7 260 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 PRO3102Q9H379 93 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 ENY2Q9NPA8 101 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 TCF19Q9Y242 345 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 TPRP12270 2363 aaKnown RBP13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 GFRA3O60609 400 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 GPR183P32249 361 aa13.07□□□□□ -0.32
SYNCRIP-202ENST00000369622 CDX4O14627 284 aaPredicted RBP13.06□□□□□ -0.32
SYNCRIP-202ENST00000369622 CXorf1O96002 111 aa13.06□□□□□ -0.32
SYNCRIP-202ENST00000369622 IGKV3-15P01624 115 aa13.06□□□□□ -0.32
SYNCRIP-202ENST00000369622 HTR1DP28221 377 aa13.06□□□□□ -0.32
SYNCRIP-202ENST00000369622 CX3CL1P78423 397 aa13.06□□□□□ -0.32
SYNCRIP-202ENST00000369622 CENPWQ5EE01 88 aa13.06□□□□□ -0.32
SYNCRIP-202ENST00000369622 FAM168AQ92567 244 aa13.06□□□□□ -0.32
SYNCRIP-202ENST00000369622 GCM1Q9NP62 436 aa13.06□□□□□ -0.32
SYNCRIP-202ENST00000369622 SERTM2A0A1B0GWG4 89 aa13.06□□□□□ -0.32
SYNCRIP-202ENST00000369622 TBR1Q16650 682 aa13.06□□□□□ -0.32
SYNCRIP-202ENST00000369622 SPACA3Q8IXA5 215 aa13.06□□□□□ -0.32
SYNCRIP-202ENST00000369622 DEFB123Q8N688 67 aa13.06□□□□□ -0.32
SYNCRIP-202ENST00000369622 OPRK1P41145 380 aa13.05□□□□□ -0.32
SYNCRIP-202ENST00000369622 UFSP1Q6NVU6 142 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms