RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 DPM3Q9P2X0 92 aa11.13□□□□□ -0.63
SHC1-202ENST00000368445 FUT9Q9Y231 359 aa11.13□□□□□ -0.63
SHC1-202ENST00000368445 ITPR1Q14643 2758 aa11.13□□□□□ -0.63
SHC1-202ENST00000368445 ZNF320A2RRD8 509 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 SEC14L6B5MCN3 397 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 PRSS8Q16651 343 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 C10orf113Q5VZT2 155 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 LINC00311Q8N616 119 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 AP4M1O00189 453 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 PYYP10082 97 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 RANP62826 216 aaKnown RBP11.12□□□□□ -0.63
SHC1-202ENST00000368445 NEU4Q8WWR8 484 aaPredicted RBP11.12□□□□□ -0.63
SHC1-202ENST00000368445 C1orf159Q96HA4 380 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 SIGLEC9Q9Y336 463 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 SVEP1Q4LDE5 3571 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 CEACAM3P40198 252 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 KLF17Q5JT82 389 aaPredicted RBP11.12□□□□□ -0.63
SHC1-202ENST00000368445 NHLRC2Q8NBF2 726 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 CHODLQ9H9P2 273 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 PTPN13Q12923 2485 aa11.12□□□□□ -0.63
SHC1-202ENST00000368445 IGHV3OR16-10A0A075B7F0 116 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 AGAP20933 346 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 ERVFC1-1P60608 527 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 LEMD1Q68G75 181 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 KCNIP4Q6PIL6 250 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 MALSU1Q96EH3 234 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 CXorf65A6NEN9 183 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 LYZP61626 148 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 ZNF114Q8NC26 417 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 SRSF12Q8WXF0 261 aaKnown RBP11.11□□□□□ -0.63
SHC1-202ENST00000368445 ZNF355PQ9NSJ1 428 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 TLN2Q9Y4G6 2542 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 CFAP46Q8IYW2 2715 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 A0A1W2PPR1 153 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 IGLV2-23P01705 113 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 C8orf88P0DMB2 117 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 OR5I1Q13606 314 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 SP5Q6BEB4 398 aaPredicted RBP11.11□□□□□ -0.63
SHC1-202ENST00000368445 OR2T10Q8NGZ9 312 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 SGMS2Q8NHU3 365 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 TMEM167BQ9NRX6 74 aa11.11□□□□□ -0.63
SHC1-202ENST00000368445 MRPL36Q9P0J6 103 aaKnown RBP11.11□□□□□ -0.63
SHC1-202ENST00000368445 DOPEY2Q9Y3R5 2298 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 HELTA6NFD8 242 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 IGLV1-47P01700 117 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 BPIFB3P59826 476 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 LINC00518Q8N0U6 118 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 OCC1Q8TAD7 63 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 CACNG8Q8WXS5 425 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 PRR27Q6MZM9 219 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 C19orf84I3L1E1 186 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 SLC17A3O00476 420 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 PPP1R2P9O14990 202 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 GNG4P50150 75 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 RAB4BP61018 213 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 PRR20EP86478 221 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 PRR20CP86479 221 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 PRR20DP86480 221 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 PRR20BP86481 221 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 PRR20AP86496 221 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 LINC00305Q7Z4B0 112 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 KIR3DL3Q8N743 410 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 TEX45Q8NA69 505 aa11.1□□□□□ -0.63
SHC1-202ENST00000368445 ABCA12Q86UK0 2595 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 ZNF98A6NK75 572 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 TRGC1P0CF51 173 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 FOLR2P14207 255 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 SLC35B1P78383 322 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 FXYD3Q14802 87 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 MORN5Q5VZ52 161 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 PQLC2Q6ZP29 291 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 OR4A5Q8NH83 315 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 PAXXQ9BUH6 204 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 NIT2Q9NQR4 276 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 HRNRQ86YZ3 2850 aaPredicted RBP11.09□□□□□ -0.63
SHC1-202ENST00000368445 TIGITQ495A1 244 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 ETFRF1Q6IPR1 90 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 LINC01551Q86U37 167 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 TNFRSF14Q92956 283 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 WNT10AQ9GZT5 417 aa11.09□□□□□ -0.63
SHC1-202ENST00000368445 TCL1AP56279 114 aa11.08□□□□□ -0.64
SHC1-202ENST00000368445 BPESC1Q9GZL8 116 aa11.08□□□□□ -0.64
SHC1-202ENST00000368445 CCDC168Q8NDH2 2452 aa11.08□□□□□ -0.64
SHC1-202ENST00000368445 TRAV34A0A0B4J273 112 aa11.08□□□□□ -0.64
SHC1-202ENST00000368445 GPX4P36969 197 aaPredicted RBP11.08□□□□□ -0.64
SHC1-202ENST00000368445 TPTE2P1Q5T6R2 138 aa11.08□□□□□ -0.64
SHC1-202ENST00000368445 ASPHD1Q5U4P2 390 aa11.08□□□□□ -0.64
SHC1-202ENST00000368445 VMO1Q7Z5L0 202 aa11.08□□□□□ -0.64
SHC1-202ENST00000368445 OR10G8Q8NGN5 311 aa11.08□□□□□ -0.64
SHC1-202ENST00000368445 RNASEH2CQ8TDP1 164 aaKnown RBP11.08□□□□□ -0.64
SHC1-202ENST00000368445 IGHV3-35A0A0C4DH35 117 aa11.08□□□□□ -0.64
SHC1-202ENST00000368445 GFI1BQ5VTD9 330 aa11.08□□□□□ -0.64
SHC1-202ENST00000368445 OR1L4Q8NGR5 311 aa11.08□□□□□ -0.64
SHC1-202ENST00000368445 ANAPC16Q96DE5 110 aa11.08□□□□□ -0.64
SHC1-202ENST00000368445 CSMD1Q96PZ7 3565 aa11.08□□□□□ -0.64
SHC1-202ENST00000368445 CGB1A6NKQ9 187 aa11.07□□□□□ -0.64
SHC1-202ENST00000368445 IGHV3-23P01764 117 aa11.07□□□□□ -0.64
SHC1-202ENST00000368445 MEOX2P50222 304 aa11.07□□□□□ -0.64
SHC1-202ENST00000368445 ATP5IP56385 69 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms