RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 ZNF815PA8K554 130 aa12.36□□□□□ -0.43
COL11A2-202ENST00000361917 NR2C2APQ86WQ0 139 aa12.36□□□□□ -0.43
COL11A2-202ENST00000361917 FGFBP3Q8TAT2 258 aa12.36□□□□□ -0.43
COL11A2-202ENST00000361917 MESP1Q9BRJ9 268 aa12.36□□□□□ -0.43
COL11A2-202ENST00000361917 TRAV40A0A0B4J280 105 aa12.36□□□□□ -0.43
COL11A2-202ENST00000361917 NRN1Q9NPD7 142 aa12.36□□□□□ -0.43
COL11A2-202ENST00000361917 TRGV4A0A0C4DH28 118 aa12.36□□□□□ -0.43
COL11A2-202ENST00000361917 PGPEP1LA6NFU8 196 aa12.36□□□□□ -0.43
COL11A2-202ENST00000361917 A0A0A6YYD4 124 aa12.36□□□□□ -0.43
COL11A2-202ENST00000361917 C19orf67A6NJJ6 358 aa12.36□□□□□ -0.43
COL11A2-202ENST00000361917 OR10W1Q8NGF6 305 aa12.36□□□□□ -0.43
COL11A2-202ENST00000361917 COQ2Q96H96 371 aa12.36□□□□□ -0.43
COL11A2-202ENST00000361917 ZNF236Q9UL36 1845 aa12.36□□□□□ -0.43
COL11A2-202ENST00000361917 TRAV9-1A0A075B6T8 112 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 C1QL4Q86Z23 238 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 SLC25A28Q96A46 364 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 VKORC1Q9BQB6 163 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 IGHV3-64A0A075B6Q5 118 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 LINC00271P0C7V0 271 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 BTCP35070 178 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 CCL20P78556 96 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 FAM169BQ8N8A8 192 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 PSG8Q9UQ74 426 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 H3BUT2 72 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 NIT1Q86X76 327 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 C11orf68Q9H3H3 251 aaKnown RBP12.35□□□□□ -0.43
COL11A2-202ENST00000361917 TRAV21A0A0B4J279 112 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 PRR32B1ATL7 298 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 NRXN2Q9P2S2 1712 aa12.35□□□□□ -0.43
COL11A2-202ENST00000361917 TRAV5A0A0B4J249 113 aa12.34□□□□□ -0.43
COL11A2-202ENST00000361917 SRSF1Q07955 248 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL11A2-202ENST00000361917 KNTC1P50748 2209 aa12.34□□□□□ -0.43
COL11A2-202ENST00000361917 TRAV2A0A0B4J234 112 aa12.34□□□□□ -0.43
COL11A2-202ENST00000361917 IGHV1-46P01743 117 aa12.34□□□□□ -0.43
COL11A2-202ENST00000361917 CD28P10747 220 aa12.34□□□□□ -0.43
COL11A2-202ENST00000361917 WFDC1Q9HC57 220 aa12.34□□□□□ -0.43
COL11A2-202ENST00000361917 ZNF319Q9P2F9 582 aa12.34□□□□□ -0.43
COL11A2-202ENST00000361917 PAX2Q02962 417 aa12.34□□□□□ -0.43
COL11A2-202ENST00000361917 FOXF2Q12947 444 aa12.34□□□□□ -0.43
COL11A2-202ENST00000361917 SAMD13Q5VXD3 122 aa12.34□□□□□ -0.43
COL11A2-202ENST00000361917 VSIRQ9H7M9 311 aa12.34□□□□□ -0.43
COL11A2-202ENST00000361917 ZNF415Q09FC8 603 aa12.34□□□□□ -0.43
COL11A2-202ENST00000361917 PATJQ8NI35 1801 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 IGLV3-12A0A075B6K2 115 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 NHP2Q9NX24 153 aaKnown RBP12.33□□□□□ -0.44
COL11A2-202ENST00000361917 CHTOPQ9Y3Y2 248 aaKnown RBP12.33□□□□□ -0.44
COL11A2-202ENST00000361917 MLNRO43193 412 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 DUSP14O95147 198 aaKnown RBP12.33□□□□□ -0.44
COL11A2-202ENST00000361917 STAG3L3P0CL85 134 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 PRR31Q5SQ13 230 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 SIGLEC15Q6ZMC9 328 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 DEFB104AQ8WTQ1 72 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 A0A0U1RRA0 63 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 SLC25A20O43772 301 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 PRCDQ00LT1 54 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 PSMG4Q5JS54 123 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 SEPSECSQ9HD40 501 aaKnown RBP12.33□□□□□ -0.44
COL11A2-202ENST00000361917 LOC102723996A0A087X1L8 192 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 CRPP02741 224 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 PAX8Q06710 450 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 EFNB3Q15768 340 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 GTSCR1Q86UQ5 136 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 FLVCR1-AS1Q8TAF5 88 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 PRDM13Q9H4Q3 707 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 METRNQ9UJH8 293 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 LRRC37AA6NMS7 1700 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 IGKV1D-8A0A087WSZ0 117 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 DUTP33316 252 aaKnown RBP12.33□□□□□ -0.44
COL11A2-202ENST00000361917 TMEM170AQ8WVE7 144 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 FNDC4Q9H6D8 234 aaPredicted RBP12.33□□□□□ -0.44
COL11A2-202ENST00000361917 MYOFQ9NZM1 2061 aa12.33□□□□□ -0.44
COL11A2-202ENST00000361917 SBF2Q86WG5 1849 aa12.32□□□□□ -0.44
COL11A2-202ENST00000361917 LYPD3O95274 346 aa12.32□□□□□ -0.44
COL11A2-202ENST00000361917 CCL1P22362 96 aa12.32□□□□□ -0.44
COL11A2-202ENST00000361917 VMO1Q7Z5L0 202 aa12.32□□□□□ -0.44
COL11A2-202ENST00000361917 TMEM219Q86XT9 240 aa12.32□□□□□ -0.44
COL11A2-202ENST00000361917 SPACA3Q8IXA5 215 aa12.32□□□□□ -0.44
COL11A2-202ENST00000361917 IGKV2-40A0A087WW87 121 aaPredicted RBP12.32□□□□□ -0.44
COL11A2-202ENST00000361917 TRAV8-2A0A0B4J237 113 aa12.32□□□□□ -0.44
COL11A2-202ENST00000361917 IGKV2D-40P01614 121 aaPredicted RBP12.32□□□□□ -0.44
COL11A2-202ENST00000361917 WNT2P09544 360 aa12.32□□□□□ -0.44
COL11A2-202ENST00000361917 KLRD1Q13241 179 aa12.32□□□□□ -0.44
COL11A2-202ENST00000361917 C8orf46Q8TAG6 207 aa12.32□□□□□ -0.44
COL11A2-202ENST00000361917 HBDP02042 147 aa12.32□□□□□ -0.44
COL11A2-202ENST00000361917 MTURNQ8N3F0 131 aa12.32□□□□□ -0.44
COL11A2-202ENST00000361917 DPH3P1Q9H4G8 78 aa12.32□□□□□ -0.44
COL11A2-202ENST00000361917 DPM2O94777 84 aa12.31□□□□□ -0.44
COL11A2-202ENST00000361917 RNF182Q8N6D2 247 aa12.31□□□□□ -0.44
COL11A2-202ENST00000361917 OCC1Q8TAD7 63 aa12.31□□□□□ -0.44
COL11A2-202ENST00000361917 PLXNA1Q9UIW2 1896 aa12.31□□□□□ -0.44
COL11A2-202ENST00000361917 GZMBP10144 247 aa12.31□□□□□ -0.44
COL11A2-202ENST00000361917 IGHV3-73A0A0B4J1V6 119 aa12.31□□□□□ -0.44
COL11A2-202ENST00000361917 DERL1Q9BUN8 251 aa12.31□□□□□ -0.44
COL11A2-202ENST00000361917 MAP1BP46821 2468 aaKnown RBP12.31□□□□□ -0.44
COL11A2-202ENST00000361917 LY6G6FQ5SQ64 297 aa12.31□□□□□ -0.44
COL11A2-202ENST00000361917 CYSLTR1Q9Y271 337 aa12.31□□□□□ -0.44
COL11A2-202ENST00000361917 ARID2Q68CP9 1835 aa12.31□□□□□ -0.44
COL11A2-202ENST00000361917 PSME4Q14997 1843 aa12.31□□□□□ -0.44
COL11A2-202ENST00000361917 TRGV11A0A075B6L2 103 aa12.3□□□□□ -0.44
COL11A2-202ENST00000361917 NAPSAO96009 420 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms