RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CISD3P0C7P0 127 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 ZGRF1Q86YA3 2104 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 IFI6P09912 130 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 IGFBP2P18065 325 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 TFF3Q07654 80 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 ARPC1AQ92747 370 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 IGHV3-48P01763 117 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 RPL23P62829 140 aaKnown RBP7.86□□□□□ -1.15
VPS13A-203ENST00000360280 SLC25A47Q6Q0C1 308 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 TRGV11A0A075B6L2 103 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 CELA2BP08218 269 aaPredicted RBP7.86□□□□□ -1.15
VPS13A-203ENST00000360280 TPTE2P1Q5T6R2 138 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 MUC21A0A0G2JKD1 596 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 MUC21A0A140T8X8 626 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 A0A1W2PPV9 198 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 MUC21Q5SSG8 566 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 ATXN7O15265 892 aaPredicted RBP7.86□□□□□ -1.15
VPS13A-203ENST00000360280 NCOR1P1Q9H4R4 102 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 SUMO4Q6EEV6 95 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 ZAR1Q86SH2 424 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 FBXL7Q9UJT9 491 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 ATP5J2P56134 94 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 A0A0G2JMM0 328 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 A0A1W2PPB8 328 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 ADARB2-AS1A8MUL3 147 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 KIR3DP1A8MWS1 328 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 PVRIGQ6DKI7 326 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 RAMP1O60894 148 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 A0A1W2PRE2 83 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 C1QL4Q86Z23 238 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 GTF3C1Q12789 2109 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 LINC00158P58513 81 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 SLC25A48Q6ZT89 311 aaKnown RBP7.85□□□□□ -1.15
VPS13A-203ENST00000360280 GTSF1LQ9H1H1 148 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 GAGE12BA1L429 117 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 ATP5G3P48201 142 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 TNFRSF14Q92956 283 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 H3BMM0 161 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 PAX4O43316 350 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 UBE2WQ96B02 151 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 IGHV1-45A0A0A0MS14 117 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 MESP2Q0VG99 397 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 DTX4Q9Y2E6 619 aa7.85□□□□□ -1.15
VPS13A-203ENST00000360280 DYSFO75923 2080 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 IGKV1D-33P01593 117 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 IGKV1-33P01594 117 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 RPL39P5Q59GN2 51 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 DUSP14O95147 198 aaKnown RBP7.84□□□□□ -1.15
VPS13A-203ENST00000360280 UCP1P25874 307 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 ZNF703Q9H7S9 590 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-203ENST00000360280 TMEM92Q6UXU6 159 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 PLEKHB2Q96CS7 222 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 EML6Q6ZMW3 1958 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 ARFGEF3Q5TH69 2177 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 A0A0J9YW62 118 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 NHSL1Q5SYE7 1610 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 IGLV1-36A0A0B4J1U3 117 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 C1QTNF9P0C862 333 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 EGR1P18146 543 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 FAM90A1Q86YD7 464 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 CHAC1Q9BUX1 264 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 IGKV1D-16P01601 117 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 ZP1P60852 638 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 PLXNA3P51805 1871 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 TNFSF13O75888 250 aa7.84□□□□□ -1.15
VPS13A-203ENST00000360280 TCRBV4S1A1TA0A5B7 111 aa7.84□□□□□ -1.16
VPS13A-203ENST00000360280 FAM90A9PA6NNJ1 464 aa7.84□□□□□ -1.16
VPS13A-203ENST00000360280 PILRBQ9UKJ0 227 aa7.84□□□□□ -1.16
VPS13A-203ENST00000360280 OBSL1O75147 1896 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 IGHV3-64A0A075B6Q5 118 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 FAM181AQ8N9Y4 354 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 CFHR5Q9BXR6 569 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 GZMBP10144 247 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 FAM90A2PQ658T7 463 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 KLF17Q5JT82 389 aaPredicted RBP7.83□□□□□ -1.16
VPS13A-203ENST00000360280 ACP7Q6ZNF0 438 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 Q6ZT83 130 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 TRGV4A0A0C4DH28 118 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 EVI2AP22794 236 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 TSKUQ8WUA8 353 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 RNF125Q96EQ8 232 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 C15orf61A6NNL5 157 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 CHCHD5Q9BSY4 110 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 FOXD3Q9UJU5 478 aaPredicted RBP7.83□□□□□ -1.16
VPS13A-203ENST00000360280 PPP1R27Q86WC6 154 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 TM2D1Q9BX74 207 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 MLNRO43193 412 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 GREB1LQ9C091 1923 aaPredicted RBP7.83□□□□□ -1.16
VPS13A-203ENST00000360280 PCNX2A6NKB5 2137 aa7.83□□□□□ -1.16
VPS13A-203ENST00000360280 TMEM8BA6NDV4 472 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 DUTP33316 252 aaKnown RBP7.82□□□□□ -1.16
VPS13A-203ENST00000360280 TMEM14DPA8MWL7 114 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 HEPN1Q6WQI6 88 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 IGHV3-66A0A0C4DH42 116 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 BCL6BQ8N143 479 aaPredicted RBP7.82□□□□□ -1.16
VPS13A-203ENST00000360280 DLEU1O43261 78 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 CD5LO43866 347 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 PRADC1Q9BSG0 188 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 COL5A3P25940 1745 aaPredicted RBP7.82□□□□□ -1.16
VPS13A-203ENST00000360280 GZMMP51124 257 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms