RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 U3KQA8 63 aa4.03□□□□□ -1.76
SCN3A-202ENST00000360093 SPTBN2O15020 2390 aa4.03□□□□□ -1.76
SCN3A-202ENST00000360093 IGKV1-12A0A0C4DH73 117 aa4.03□□□□□ -1.76
SCN3A-202ENST00000360093 LINC01549A6NIU2 74 aa4.03□□□□□ -1.76
SCN3A-202ENST00000360093 IGKV1D-12P01611 117 aa4.03□□□□□ -1.76
SCN3A-202ENST00000360093 FABP5P3A8MUU1 101 aa4.03□□□□□ -1.76
SCN3A-202ENST00000360093 COX6CP09669 75 aa4.03□□□□□ -1.76
SCN3A-202ENST00000360093 CCL20P78556 96 aa4.03□□□□□ -1.76
SCN3A-202ENST00000360093 JOSD1Q15040 202 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-202ENST00000360093 TPTE2P1Q5T6R2 138 aa4.03□□□□□ -1.76
SCN3A-202ENST00000360093 TMEM101Q96IK0 257 aa4.03□□□□□ -1.76
SCN3A-202ENST00000360093 USMG5Q96IX5 58 aa4.03□□□□□ -1.76
SCN3A-202ENST00000360093 TFF3Q07654 80 aa4.03□□□□□ -1.77
SCN3A-202ENST00000360093 IMMP2LQ96T52 175 aa4.03□□□□□ -1.77
SCN3A-202ENST00000360093 C2orf88Q9BSF0 95 aa4.03□□□□□ -1.77
SCN3A-202ENST00000360093 DCAF16Q9NXF7 216 aa4.03□□□□□ -1.77
SCN3A-202ENST00000360093 IGHV3OR16-12A0A075B7B8 117 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 RNF222A6NCQ9 220 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 GNLYP22749 145 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 RHOGP84095 191 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 TMEM167AQ8TBQ9 72 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 MESP1Q9BRJ9 268 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 C5orf52A6NGY3 159 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 C1QTNF9BB2RNN3 333 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 TIMM23O14925 209 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 CACNG7P62955 275 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 Q5BKY6 102 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 VMO1Q7Z5L0 202 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 CBY1Q9Y3M2 126 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 TNFRSF18Q9Y5U5 241 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 IGKV1-27A0A075B6S5 117 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 ATP5LO75964 103 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 GATA4P43694 442 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 PAX8Q06710 450 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 LINC01356Q8N9X3 169 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 MBNL3Q9NUK0 354 aaKnown RBP4.02□□□□□ -1.77
SCN3A-202ENST00000360093 TRBV20OR9-2A0A075B6H5 130 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 A0A0B4J293 547 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 OVOL1O14753 267 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 Q6P435 159 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 HSPB9Q9BQS6 159 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 RPP21Q9H633 154 aaKnown RBP4.02□□□□□ -1.77
SCN3A-202ENST00000360093 ZNF106Q9H2Y7 1883 aaKnown RBP4.02□□□□□ -1.77
SCN3A-202ENST00000360093 IGHV1-3A0A0C4DH29 117 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 BUB1B-PAK6H3BSN5 160 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 IGHV3-48P01763 117 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 SRP19P09132 144 aaKnown RBP4.02□□□□□ -1.77
SCN3A-202ENST00000360093 LDLRAD2Q5SZI1 272 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 ZNF474Q6S9Z5 364 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-202ENST00000360093 ALKBH7Q9BT30 221 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-202ENST00000360093 GEMIN7Q9H840 131 aaKnown RBP4.02□□□□□ -1.77
SCN3A-202ENST00000360093 TRAV41A0A0B4J266 112 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 TRAV21A0A0B4J279 112 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 TRAV40A0A0B4J280 105 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 F12P00748 615 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-202ENST00000360093 SRIP30626 198 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 GTSCR1Q86UQ5 136 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 CACNA1BQ00975 2339 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 OR4C46A6NHA9 309 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 FAM223BA6NKX1 122 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 CIDEAO60543 219 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 ZNF324O75467 553 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-202ENST00000360093 QRFPP83859 136 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 PRSS8Q16651 343 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 FAM223AQ8IWN6 122 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 ZNF502Q8TBZ5 544 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 DUX3Q96PT4 197 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 TRGV9Q99603 122 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 PAM16Q9Y3D7 125 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 WNK2Q9Y3S1 2297 aa4.02□□□□□ -1.77
SCN3A-202ENST00000360093 CBY3A6NI87 242 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 NMUP48645 174 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 FHITP49789 147 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 STHQ8IWL8 128 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 CD177Q8N6Q3 437 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 BEND2Q8NDZ0 799 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 WDR83OSQ9Y284 106 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 CLDN16Q9Y5I7 305 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 KIAA1549LQ6ZVL6 1849 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 TRAV34A0A0B4J273 112 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 F2Z2F3 143 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 SNRPCP09234 159 aaKnown RBP4.01□□□□□ -1.77
SCN3A-202ENST00000360093 Q8TCH9 128 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 SSC4DQ8WTU2 575 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 MBD3L1Q8WWY6 194 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 GAFA1Q96PS6 74 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 UQCR10Q9UDW1 63 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 PSMB11A5LHX3 300 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 IZUMO1RA6ND01 250 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 A8MXK9 166 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 LGALS3P17931 250 aaKnown RBP4.01□□□□□ -1.77
SCN3A-202ENST00000360093 LMO1P25800 156 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 FOXG1P55316 489 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-202ENST00000360093 IFITM2Q01629 132 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 ADIPOQQ15848 244 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 RNF151Q2KHN1 245 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 FER1L6-AS1Q8NA97 138 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 NEU1Q99519 415 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 PCNX1Q96RV3 2341 aa4.01□□□□□ -1.77
SCN3A-202ENST00000360093 CEP192Q8TEP8 1941 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms