RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 TMEM86BQ8N661 226 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 NAPSAO96009 420 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 CECR9P0C854 216 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 NHSQ6T4R5 1651 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 A0A087X0K7 114 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 NPIPB13A6NJU9 1138 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 NPIPB5A8MRT5 1133 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 GTF3AQ92664 365 aaKnown RBP9.36□□□□□ -0.91
COL11A1-202ENST00000358392 A0A0G2JMM0 328 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 A0A1W2PPB8 328 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 KIR3DP1A8MWS1 328 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 LINC01590Q5TEZ4 76 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 ATP5L2Q7Z4Y8 100 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 CITED1Q99966 193 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 TMEM8BA6NDV4 472 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 LGALS1P09382 135 aaKnown RBP9.36□□□□□ -0.91
COL11A1-202ENST00000358392 ERVK11-1P61568 191 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 OSR1Q8TAX0 266 aaPredicted RBP9.36□□□□□ -0.91
COL11A1-202ENST00000358392 NDUFAF3Q9BU61 184 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 TRAV8-3A0A0A6YYJ7 113 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 KBTBD11-OT1A0A1B0GTJ5 212 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 A0A1B0GW15 77 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 Q6AWC8 147 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 POLR2AP24928 1970 aaKnown RBP9.35□□□□□ -0.91
COL11A1-202ENST00000358392 OCC1Q8TAD7 63 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 RGPD3A6NKT7 1758 aaPredicted RBP9.35□□□□□ -0.91
COL11A1-202ENST00000358392 QSER1Q2KHR3 1735 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 ITGB1BP1O14713 200 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 TPRP12270 2363 aaKnown RBP9.35□□□□□ -0.91
COL11A1-202ENST00000358392 A0A0G2JK05 382 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 FBLIM1Q8WUP2 373 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 IMMP1LQ96LU5 166 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 ZNF318Q5VUA4 2279 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 SHISA3A0PJX4 238 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 SUMO4Q6EEV6 95 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 C18orf12Q96KH6 178 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 ASCL2Q99929 193 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 VSIRQ9H7M9 311 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 A8MXK9 166 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 HIST1H2BKO60814 126 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 HIST1H2BJP06899 126 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 HIST1H2BOP23527 126 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 HIST1H2BBP33778 126 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 HIST1H2BDP58876 126 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 HIST1H2BCP62807 126 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 HIST2H2BEQ16778 126 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.35□□□□□ -0.91
COL11A1-202ENST00000358392 TPTE2P1Q5T6R2 138 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 GAGE2AQ6NT46 116 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 C2orf82Q6UX34 121 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 ZCCHC24Q8N2G6 241 aaKnown RBP9.35□□□□□ -0.91
COL11A1-202ENST00000358392 HIST1H2BHQ93079 126 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 IFI27L1Q96BM0 104 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 HIST1H2BNQ99877 126 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 HIST1H2BMQ99879 126 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 MCRIP2Q9BUT9 160 aaKnown RBP9.35□□□□□ -0.91
COL11A1-202ENST00000358392 PSG8Q9UQ74 426 aa9.35□□□□□ -0.91
COL11A1-202ENST00000358392 GHRHP01286 108 aa9.34□□□□□ -0.91
COL11A1-202ENST00000358392 LAGE3Q14657 143 aa9.34□□□□□ -0.91
COL11A1-202ENST00000358392 ZNF124Q15973 351 aa9.34□□□□□ -0.91
COL11A1-202ENST00000358392 PTPRFP10586 1907 aa9.34□□□□□ -0.91
COL11A1-202ENST00000358392 RNF222A6NCQ9 220 aa9.34□□□□□ -0.91
COL11A1-202ENST00000358392 GLRXP35754 106 aa9.34□□□□□ -0.91
COL11A1-202ENST00000358392 SSBP2P81877 361 aaPredicted RBP9.34□□□□□ -0.91
COL11A1-202ENST00000358392 PSMG4Q5JS54 123 aa9.34□□□□□ -0.91
COL11A1-202ENST00000358392 LYNX1G3V0Z9 82 aa9.34□□□□□ -0.91
COL11A1-202ENST00000358392 LYNX1P0DP58 116 aa9.34□□□□□ -0.91
COL11A1-202ENST00000358392 Q6ZT83 130 aa9.34□□□□□ -0.91
COL11A1-202ENST00000358392 OR10W1Q8NGF6 305 aa9.34□□□□□ -0.91
COL11A1-202ENST00000358392 TCRBV4S1A1TA0A5B7 111 aa9.34□□□□□ -0.91
COL11A1-202ENST00000358392 VWC2LB2RUY7 222 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 WISP3O95389 354 aaPredicted RBP9.33□□□□□ -0.92
COL11A1-202ENST00000358392 RPL15P61313 204 aaKnown RBP9.33□□□□□ -0.92
COL11A1-202ENST00000358392 SLC25A28Q96A46 364 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 STRCQ7RTU9 1775 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 TM4SF5O14894 197 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 RPL32P62910 135 aaKnown RBP9.33□□□□□ -0.92
COL11A1-202ENST00000358392 PLPPR1Q8TBJ4 325 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 FAM57AQ8TBR7 257 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 RNF125Q96EQ8 232 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 COX5BP10606 129 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 RPL35AP18077 110 aaKnown RBP9.33□□□□□ -0.92
COL11A1-202ENST00000358392 RHOGP84095 191 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 ZNF837Q96EG3 531 aaPredicted RBP9.33□□□□□ -0.92
COL11A1-202ENST00000358392 D6R8Y8 96 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 CCL20P78556 96 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 IGKV1D-13A0A0B4J2D9 117 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 IGKV1-13P0DP09 117 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 HSD52Q0P140 79 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 A0A1W2PRE2 83 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 NBR2O15453 112 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 CEACAM1P13688 526 aa9.33□□□□□ -0.92
COL11A1-202ENST00000358392 BCL6BQ8N143 479 aaPredicted RBP9.33□□□□□ -0.92
COL11A1-202ENST00000358392 TCRAP04437 139 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 CXCL1P09341 107 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 ORMDL2Q53FV1 153 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 TM2D1Q9BX74 207 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 TRAV9-1A0A075B6T8 112 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 IGHV2OR16-5A0A0B4J2B6 119 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 ESDP10768 282 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms