RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 ACOT7LQ6ZUV0 252 aa19.63■□□□□ 0.73
SSBP3-202ENST00000357475 SLC16A13Q7RTY0 426 aa19.63■□□□□ 0.73
SSBP3-202ENST00000357475 ZNF502Q8TBZ5 544 aa19.63■□□□□ 0.73
SSBP3-202ENST00000357475 SULT1A1P50225 295 aa19.62■□□□□ 0.73
SSBP3-202ENST00000357475 DEFB136Q30KP8 78 aa19.62■□□□□ 0.73
SSBP3-202ENST00000357475 ZNF546Q86UE3 836 aa19.62■□□□□ 0.73
SSBP3-202ENST00000357475 VN1R17PQ8TDU5 208 aa19.62■□□□□ 0.73
SSBP3-202ENST00000357475 ZC4H2Q9NQZ6 224 aa19.62■□□□□ 0.73
SSBP3-202ENST00000357475 C21orf62Q9NYP8 219 aa19.62■□□□□ 0.73
SSBP3-202ENST00000357475 TNFSF18Q9UNG2 199 aa19.62■□□□□ 0.73
SSBP3-202ENST00000357475 A0A0G2JLM5 398 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 ANKRD34BA5PLL1 514 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 RNF222A6NCQ9 220 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 CDX1P47902 265 aaPredicted RBP19.61■□□□□ 0.73
SSBP3-202ENST00000357475 ZNF343Q6P1L6 599 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 C12orf54Q6X4T0 127 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 UBAC2Q8NBM4 344 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 KLHL30-AS1Q8NEE0 82 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 OR10P1Q8NGE3 313 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 EEF1AKMT3Q96AZ1 226 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 TSSC4Q9Y5U2 329 aaPredicted RBP19.61■□□□□ 0.73
SSBP3-202ENST00000357475 GAMTQ14353 236 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 NSUN5P1Q3KNT7 163 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 ACSM6Q6P461 480 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 CLEC19AQ6UXS0 136 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 C8orf86Q6ZUL3 223 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 CXorf58Q96LI9 332 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 SLC25A31Q9H0C2 315 aa19.61■□□□□ 0.73
SSBP3-202ENST00000357475 PPP5D1E7EU14 171 aa19.6■□□□□ 0.73
SSBP3-202ENST00000357475 I3L521 148 aa19.6■□□□□ 0.73
SSBP3-202ENST00000357475 ARPC5O15511 151 aa19.6■□□□□ 0.73
SSBP3-202ENST00000357475 RND2P52198 227 aa19.6■□□□□ 0.73
SSBP3-202ENST00000357475 SLC38A11Q08AI6 406 aa19.6■□□□□ 0.73
SSBP3-202ENST00000357475 STX12Q86Y82 276 aa19.6■□□□□ 0.73
SSBP3-202ENST00000357475 ACY3Q96HD9 319 aa19.6■□□□□ 0.73
SSBP3-202ENST00000357475 DUX3Q96PT4 197 aa19.6■□□□□ 0.73
SSBP3-202ENST00000357475 ZNF747Q9BV97 191 aa19.6■□□□□ 0.73
SSBP3-202ENST00000357475 OR2T8A6NH00 312 aa19.59■□□□□ 0.73
SSBP3-202ENST00000357475 LGALS1P09382 135 aaKnown RBP19.59■□□□□ 0.73
SSBP3-202ENST00000357475 GPR183P32249 361 aa19.59■□□□□ 0.73
SSBP3-202ENST00000357475 GPX4P36969 197 aaPredicted RBP19.59■□□□□ 0.73
SSBP3-202ENST00000357475 C3orf56Q8N813 242 aa19.59■□□□□ 0.73
SSBP3-202ENST00000357475 C4orf3Q8WVX3 66 aa19.59■□□□□ 0.73
SSBP3-202ENST00000357475 AQP10Q96PS8 301 aa19.59■□□□□ 0.73
SSBP3-202ENST00000357475 SMIM3Q9BZL3 60 aa19.59■□□□□ 0.73
SSBP3-202ENST00000357475 HSPB11Q9Y547 144 aa19.59■□□□□ 0.73
SSBP3-202ENST00000357475 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.58■□□□□ 0.73
SSBP3-202ENST00000357475 RPS10-NUDT3A0A1W2PQS6 291 aa19.58■□□□□ 0.73
SSBP3-202ENST00000357475 NUDT19A8MXV4 375 aa19.58■□□□□ 0.73
SSBP3-202ENST00000357475 CLEC3BP05452 202 aa19.58■□□□□ 0.73
SSBP3-202ENST00000357475 AP2S1P53680 142 aaPredicted RBP19.58■□□□□ 0.73
SSBP3-202ENST00000357475 OR5C1Q8NGR4 320 aa19.58■□□□□ 0.73
SSBP3-202ENST00000357475 NPIPB3Q92617 1050 aa19.58■□□□□ 0.73
SSBP3-202ENST00000357475 TRBV7-1A0A0A6YYK4 115 aa19.57■□□□□ 0.72
SSBP3-202ENST00000357475 C1QBP02746 253 aa19.57■□□□□ 0.72
SSBP3-202ENST00000357475 MFAP4P55083 255 aa19.57■□□□□ 0.72
SSBP3-202ENST00000357475 Q56UQ5 140 aa19.57■□□□□ 0.72
SSBP3-202ENST00000357475 CACNG8Q8WXS5 425 aa19.57■□□□□ 0.72
SSBP3-202ENST00000357475 BAXQ07812 192 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 CLINT1Q14677 625 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 ETFRF1Q6IPR1 90 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 NDUFA11Q86Y39 141 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 OR4X1Q8NH49 305 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 IGHV4OR15-8A0A075B7B6 117 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 IGKV1OR2-108A0A075B7D4 117 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 A0A087WW49 117 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 SMCO3A2RU48 225 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 DLK1P80370 383 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 TMEM116Q8NCL8 245 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 ZNF414Q96IQ9 312 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 SLC35E1Q96K37 410 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 CHRDL1Q9BU40 450 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 WFDC1Q9HC57 220 aa19.56■□□□□ 0.72
SSBP3-202ENST00000357475 BMPR1BO00238 502 aa19.55■□□□□ 0.72
SSBP3-202ENST00000357475 PFDN1O60925 122 aa19.55■□□□□ 0.72
SSBP3-202ENST00000357475 CXCL2P19875 107 aa19.55■□□□□ 0.72
SSBP3-202ENST00000357475 ADMP35318 185 aa19.55■□□□□ 0.72
SSBP3-202ENST00000357475 LILRB2Q8N423 598 aa19.55■□□□□ 0.72
SSBP3-202ENST00000357475 INO80EQ8NBZ0 244 aaPredicted RBP19.55■□□□□ 0.72
SSBP3-202ENST00000357475 OR1S2Q8NGQ3 325 aa19.55■□□□□ 0.72
SSBP3-202ENST00000357475 PEF1Q9UBV8 284 aaKnown RBP19.55■□□□□ 0.72
SSBP3-202ENST00000357475 CTSGP08311 255 aa19.54■□□□□ 0.72
SSBP3-202ENST00000357475 S100A11P31949 105 aa19.54■□□□□ 0.72
SSBP3-202ENST00000357475 HBG1P69891 147 aa19.54■□□□□ 0.72
SSBP3-202ENST00000357475 HBG2P69892 147 aa19.54■□□□□ 0.72
SSBP3-202ENST00000357475 RAX2Q96IS3 184 aa19.54■□□□□ 0.72
SSBP3-202ENST00000357475 MFFQ9GZY8 342 aa19.54■□□□□ 0.72
SSBP3-202ENST00000357475 FBXL17Q9UF56 701 aa19.54■□□□□ 0.72
SSBP3-202ENST00000357475 ANK2Q01484 3957 aa19.53■□□□□ 0.72
SSBP3-202ENST00000357475 IGKV1D-37A0A075B6S9 117 aa19.53■□□□□ 0.72
SSBP3-202ENST00000357475 IGHV3-35A0A0C4DH35 117 aa19.53■□□□□ 0.72
SSBP3-202ENST00000357475 HMSDA8MTL9 139 aa19.53■□□□□ 0.72
SSBP3-202ENST00000357475 GNG7O60262 68 aa19.53■□□□□ 0.72
SSBP3-202ENST00000357475 CLN5O75503 358 aa19.53■□□□□ 0.72
SSBP3-202ENST00000357475 FCGR2BP31994 310 aaPredicted RBP19.53■□□□□ 0.72
SSBP3-202ENST00000357475 NUP62P37198 522 aaPredicted RBP19.53■□□□□ 0.72
SSBP3-202ENST00000357475 EIF2B2P49770 351 aaKnown RBP19.53■□□□□ 0.72
SSBP3-202ENST00000357475 RUNX1Q01196 453 aa19.53■□□□□ 0.72
SSBP3-202ENST00000357475 AKR1C1Q04828 323 aa19.53■□□□□ 0.72
SSBP3-202ENST00000357475 ZFP69Q49AA0 526 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms