RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 HILPDAQ9Y5L2 63 aa6.29□□□□□ -1.4
CCR9-201ENST00000355983 PTPRBP23467 1997 aa6.29□□□□□ -1.4
CCR9-201ENST00000355983 IGLV3-12A0A075B6K2 115 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.28□□□□□ -1.4
CCR9-201ENST00000355983 PPP1R32Q7Z5V6 425 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 SLC22A18ASQ8N1D0 253 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 ZNF837Q96EG3 531 aaPredicted RBP6.28□□□□□ -1.4
CCR9-201ENST00000355983 FOXB1Q99853 325 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 AP5S1Q9NUS5 200 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 SPTY2D1-AS1A0A0U1RR47 76 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 PEX7O00628 323 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 CELA3AP09093 270 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 KIR2DS2P43631 304 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 CAMPP49913 170 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 FOXA3P55318 350 aaPredicted RBP6.28□□□□□ -1.4
CCR9-201ENST00000355983 RPS16P62249 146 aaKnown RBP6.28□□□□□ -1.4
CCR9-201ENST00000355983 WFDC2Q14508 124 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 ZNF146Q15072 292 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 CR1LQ2VPA4 569 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 TMEM196Q5HYL7 178 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 Q6ZR03 302 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 COQ2Q96H96 371 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 SLC25A33Q9BSK2 321 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 CDIP1Q9H305 208 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 IL23AQ9NPF7 189 aa6.28□□□□□ -1.4
CCR9-201ENST00000355983 AMMECR1Q9Y4X0 333 aaPredicted RBP6.28□□□□□ -1.4
CCR9-201ENST00000355983 TRBV7-9A0A0J9YWB2 115 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 A0A1W2PQF6 199 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 OOEPA6NGQ2 149 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 CCL2P13500 99 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 C1orf53Q5VUE5 145 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 RPS19BP1Q86WX3 136 aaKnown RBP6.27□□□□□ -1.41
CCR9-201ENST00000355983 PIP4P2Q8N4L2 257 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 OR13H1Q8NG92 308 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 RAB37Q96AX2 223 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 OCIAD1Q9NX40 245 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 C19orf71A6NCJ1 209 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 NPIPB6E9PJ23 425 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 ZNF157P51786 506 aaPredicted RBP6.27□□□□□ -1.41
CCR9-201ENST00000355983 PRSS12P56730 875 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 LINC01559Q495D7 138 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 GAGE13Q4V321 117 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 C17orf82Q86X59 251 aaPredicted RBP6.27□□□□□ -1.41
CCR9-201ENST00000355983 RITA1Q96K30 269 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 MLST8Q9BVC4 326 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 TNFRSF18Q9Y5U5 241 aa6.27□□□□□ -1.41
CCR9-201ENST00000355983 TMEM30CPA0ZSE6 113 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 IGLL5B9A064 214 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 H3BMG7 143 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 ZFAND5O76080 213 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 OR2H2O95918 312 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 SPINK8P0C7L1 97 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 CA6P23280 308 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 DSCR4P56555 118 aaPredicted RBP6.26□□□□□ -1.41
CCR9-201ENST00000355983 SRYQ05066 204 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 TRAT1Q6PIZ9 186 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 C16orf47Q6ZP98 133 aaPredicted RBP6.26□□□□□ -1.41
CCR9-201ENST00000355983 ZNF329Q86UD4 541 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 NAA38Q9BRA0 125 aaKnown RBP6.26□□□□□ -1.41
CCR9-201ENST00000355983 C1QTNF4Q9BXJ3 329 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 GCM1Q9NP62 436 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 RNF186Q9NXI6 227 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 TCF19Q9Y242 345 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 RTTNQ86VV8 2226 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 TCRBV4S1A1TA0A5B7 111 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 LINC01619G3V211 115 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 CHEK1O14757 476 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 APOHP02749 345 aaPredicted RBP6.26□□□□□ -1.41
CCR9-201ENST00000355983 B4GALT1P15291 398 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 MYCNOSP40205 109 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 ERVK-16P61578 105 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 FOXI1Q12951 378 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 RNF183Q96D59 192 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 FAM167A-AS1Q96KT0 104 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 ZNF714Q96N38 554 aa6.26□□□□□ -1.41
CCR9-201ENST00000355983 FOXA2Q9Y261 457 aaPredicted RBP6.26□□□□□ -1.41
CCR9-201ENST00000355983 LINC00473A8K010 186 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 DLL1O00548 723 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 NCR2O95944 276 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 COL9A1P20849 921 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 SPINK9Q5DT21 86 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 ABHD12Q8N2K0 398 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 NANOS1Q8WY41 292 aaKnown RBP6.25□□□□□ -1.41
CCR9-201ENST00000355983 POLDIP2Q9Y2S7 368 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 FER1L5A0AVI2 2057 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 LOC102723996A0A087X1L8 192 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 A0A1B0GWB2 263 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 ZNF716A6NP11 495 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 SNAI2O43623 268 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 GFERP55789 205 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 OR1C1Q15619 314 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 ETDBQ3ZM63 59 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 ZNF542PQ5EBM4 170 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 Q6ZUT4 128 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 CEND1Q8N111 149 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 BCL6BQ8N143 479 aaPredicted RBP6.25□□□□□ -1.41
CCR9-201ENST00000355983 ZNF808Q8N4W9 903 aaPredicted RBP6.25□□□□□ -1.41
CCR9-201ENST00000355983 OR5AN1Q8NGI8 311 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 FGFBP3Q8TAT2 258 aa6.25□□□□□ -1.41
CCR9-201ENST00000355983 CHCHD2Q9Y6H1 151 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms