RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 CCL17Q92583 94 aa6.8□□□□□ -1.32
HTT-201ENST00000355072 TPTE2P1Q5T6R2 138 aa6.8□□□□□ -1.32
HTT-201ENST00000355072 SRSF12Q8WXF0 261 aaKnown RBP6.8□□□□□ -1.32
HTT-201ENST00000355072 ZNF815PA8K554 130 aa6.8□□□□□ -1.32
HTT-201ENST00000355072 PRR33A8MZF0 331 aa6.8□□□□□ -1.32
HTT-201ENST00000355072 TIMM23O14925 209 aa6.8□□□□□ -1.32
HTT-201ENST00000355072 COL9A1P20849 921 aa6.8□□□□□ -1.32
HTT-201ENST00000355072 ZNF137PP52743 207 aa6.8□□□□□ -1.32
HTT-201ENST00000355072 CXorf66Q5JRM2 361 aaPredicted RBP6.8□□□□□ -1.32
HTT-201ENST00000355072 C9orf153Q5TBE3 101 aa6.8□□□□□ -1.32
HTT-201ENST00000355072 PSMB11A5LHX3 300 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 VWC2LB2RUY7 222 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 GLRX5Q86SX6 157 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 SEPSECSQ9HD40 501 aaKnown RBP6.79□□□□□ -1.32
HTT-201ENST00000355072 FOXI3A8MTJ6 420 aaPredicted RBP6.79□□□□□ -1.32
HTT-201ENST00000355072 CFAP161Q6P656 301 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 WFDC8Q8IUA0 241 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 FBXL15Q9H469 300 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 RPL23P62829 140 aaKnown RBP6.79□□□□□ -1.32
HTT-201ENST00000355072 LILRA3Q8N6C8 439 aaPredicted RBP6.79□□□□□ -1.32
HTT-201ENST00000355072 IGFBPL1Q8WX77 278 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 C2orf16Q68DN1 1984 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 C1QL1O75973 258 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 TRACP01848 142 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 ASPHD2Q6ICH7 369 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 C18orf12Q96KH6 178 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 UBL5Q9BZL1 73 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 WNT10AQ9GZT5 417 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 F11RQ9Y624 299 aaKnown RBP6.79□□□□□ -1.32
HTT-201ENST00000355072 SPSB3Q6PJ21 355 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 TMEFF1Q8IYR6 380 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 WFDC5Q8TCV5 224 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 FOXA2Q9Y261 457 aaPredicted RBP6.79□□□□□ -1.32
HTT-201ENST00000355072 R4GN57 208 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 ZG16O60844 167 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 FOXC2Q99958 501 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 KLHDC2Q9Y2U9 406 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 TRBV6-6A0A0A6YYG2 114 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 BTCP35070 178 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 LINC01551Q86U37 167 aa6.79□□□□□ -1.32
HTT-201ENST00000355072 KLF4O43474 513 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 WNT2BQ93097 391 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 C1QTNF4Q9BXJ3 329 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 EDA2RQ9HAV5 297 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 DLL3Q9NYJ7 618 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 IL6RP08887 468 aaPredicted RBP6.78□□□□□ -1.32
HTT-201ENST00000355072 FAM89BQ8N5H3 189 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 PLAC1Q9HBJ0 212 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 K7EP13 123 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 CCL11P51671 97 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 UNC119Q13432 240 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 GFRALQ6UXV0 394 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 WFDC6Q9BQY6 131 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 SELLP14151 372 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 BRWD3Q6RI45 1802 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 IGLV1-36A0A0B4J1U3 117 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 C9orf118A6NHY6 69 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 C1QTNF5Q9BXJ0 243 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 Q9H3A6 140 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 ACACBO00763 2458 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 SPAG8Q99932 426 aaPredicted RBP6.78□□□□□ -1.32
HTT-201ENST00000355072 LHFPL6Q9Y693 200 aa6.78□□□□□ -1.32
HTT-201ENST00000355072 TRAV21A0A0B4J279 112 aa6.77□□□□□ -1.32
HTT-201ENST00000355072 LOXL3P58215 753 aa6.77□□□□□ -1.32
HTT-201ENST00000355072 RLN3Q8WXF3 142 aa6.77□□□□□ -1.32
HTT-201ENST00000355072 B9A039 149 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 NDUFB8O95169 186 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 PGPA6NDG6 321 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 FCN3O75636 299 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 CBLN3Q6UW01 205 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 RTBDNQ9BSG5 229 aaPredicted RBP6.77□□□□□ -1.33
HTT-201ENST00000355072 GAGE12HA6NDE8 117 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 SLAQ13239 276 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 GUSBP1Q15486 140 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 FNDC4Q9H6D8 234 aaPredicted RBP6.77□□□□□ -1.33
HTT-201ENST00000355072 ANKHD1Q8IWZ3 2542 aaKnown RBP6.77□□□□□ -1.33
HTT-201ENST00000355072 IGHV1OR21-1A0A087WYE8 117 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 SOCS3O14543 225 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 SLC25A28Q96A46 364 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 MYMXA0A1B0GTQ4 84 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 OOSP1A8MZH6 123 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 GAGE12JA6NER3 117 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 J3QRE1 110 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 K7EP34 96 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 GAGE7O76087 117 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 GAGE12FP0CL80 117 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 GAGE12GP0CL81 117 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 GAGE12IP0CL82 117 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 GAGE4Q13068 117 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 ANKRD34AQ69YU3 496 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 UNQ5815/PRO19632Q6UWF5 114 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 C2orf82Q6UX34 121 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 LHX9Q9NQ69 397 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 WNT5AP41221 380 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 TMEM75Q8N9X5 138 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 C16orf97H3BN30 126 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 IGHV3-9P01782 118 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 HGFACQ04756 655 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 KIR3DS1Q14943 382 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 SLC25A47Q6Q0C1 308 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms