RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 MFAP2P55001 183 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 FOXE3Q13461 319 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 C19orf35Q6ZS72 473 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 Q8IYB0 196 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 OR4S2Q8NH73 311 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 DUSP13Q9UII6 198 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 TSSC4Q9Y5U2 329 aaPredicted RBP7.73□□□□□ -1.17
SMG6-202ENST00000354901 LAMA5O15230 3695 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 ISLRO14498 428 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 TRIP6Q15654 476 aaKnown RBP7.73□□□□□ -1.17
SMG6-202ENST00000354901 MIC13Q5XKP0 118 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 H2BFWTQ7Z2G1 175 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 VKORC1L1Q8N0U8 176 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 OR13A1Q8NGR1 328 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 HCFC1P51610 2035 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 TEX48A0A1B0GUV7 120 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 GNG4P50150 75 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 ZNF146Q15072 292 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 ZNF645Q8N7E2 425 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 COQ2Q96H96 371 aa7.73□□□□□ -1.17
SMG6-202ENST00000354901 MBNL3Q9NUK0 354 aaKnown RBP7.73□□□□□ -1.17
SMG6-202ENST00000354901 LINC00473A8K010 186 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 CENPWQ5EE01 88 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 IGF2-ASQ6U949 168 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 TMEM178AQ8NBL3 297 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 JMJD8Q96S16 334 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 YTHDF2Q9Y5A9 579 aaKnown RBP7.72□□□□□ -1.17
SMG6-202ENST00000354901 SPCS1Q9Y6A9 102 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 ACACAQ13085 2346 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 SCGB2A1O75556 95 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 HIST1H1EP10412 219 aaKnown RBP7.72□□□□□ -1.17
SMG6-202ENST00000354901 CRYBB3P26998 211 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 HERV-K104P63124 156 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 FOXF2Q12947 444 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 CATR1Q13166 79 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 TRAT1Q6PIZ9 186 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 TMEM136Q6ZRR5 245 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 SRSF8Q9BRL6 282 aaKnown RBP7.72□□□□□ -1.17
SMG6-202ENST00000354901 TMEM70Q9BUB7 260 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.72□□□□□ -1.17
SMG6-202ENST00000354901 GNG12Q9UBI6 72 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 IGHV3OR15-7A0A075B7D8 119 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 LRRC30A6NM36 301 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 GPR183P32249 361 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 ZNF137PP52743 207 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 ZNF138P52744 262 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 BRWD1-AS2P59051 145 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 SPATA31B1PQ5VZV4 182 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 OR2K2Q8NGT1 345 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 C18orf32Q8TCD1 76 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 GEMIN7Q9H840 131 aaKnown RBP7.72□□□□□ -1.17
SMG6-202ENST00000354901 KCNIP2Q9NS61 270 aa7.72□□□□□ -1.17
SMG6-202ENST00000354901 F11RQ9Y624 299 aaKnown RBP7.72□□□□□ -1.17
SMG6-202ENST00000354901 DMXL1Q9Y485 3027 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 PIEZO2Q9H5I5 2752 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.71□□□□□ -1.17
SMG6-202ENST00000354901 NPIPB11E5RHQ5 1161 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 RRHO14718 337 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 FCGR3BO75015 233 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 LINC00869P0C866 280 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 ARL3P36405 182 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 VWC2Q2TAL6 325 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 FAM214BQ7L5A3 538 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 FDCSPQ8NFU4 85 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 OR10AG1Q8NH19 301 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 LEAP2Q969E1 77 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 SGK494Q96LW2 274 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 OR51B2Q9Y5P1 312 aa7.71□□□□□ -1.17
SMG6-202ENST00000354901 TMEM14EPQ6UXP3 125 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 BPIFA4PQ86YQ2 179 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 C11orf53Q8IXP5 236 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 BOD1L2Q8IYS8 172 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 OR2Z1Q8NG97 314 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 LRRC29Q8WV35 223 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 SFXN3Q9BWM7 321 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 MRPL27Q9P0M9 148 aaKnown RBP7.71□□□□□ -1.18
SMG6-202ENST00000354901 OTOGLQ3ZCN5 2332 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 OOEPA6NGQ2 149 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 IQCF6A8MYZ5 107 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 CD5LO43866 347 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 CECR9P0C854 216 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 TIGITQ495A1 244 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 WDR82Q6UXN9 313 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 ACP7Q6ZNF0 438 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 C1orf122Q6ZSJ8 110 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 C9orf106Q8NAJ2 232 aa7.71□□□□□ -1.18
SMG6-202ENST00000354901 EAF1Q96JC9 268 aaPredicted RBP7.71□□□□□ -1.18
SMG6-202ENST00000354901 ABCA1O95477 2261 aa7.7□□□□□ -1.18
SMG6-202ENST00000354901 TMPRSS2O15393 492 aa7.7□□□□□ -1.18
SMG6-202ENST00000354901 FOXH1O75593 365 aa7.7□□□□□ -1.18
SMG6-202ENST00000354901 AMY1AP04745 511 aa7.7□□□□□ -1.18
SMG6-202ENST00000354901 ADH4P08319 380 aa7.7□□□□□ -1.18
SMG6-202ENST00000354901 APOBEC3AP31941 199 aaPredicted RBP7.7□□□□□ -1.18
SMG6-202ENST00000354901 FAM201AQ5SY85 155 aa7.7□□□□□ -1.18
SMG6-202ENST00000354901 OR4P4Q8NGL7 312 aa7.7□□□□□ -1.18
SMG6-202ENST00000354901 GNB1LQ9BYB4 327 aa7.7□□□□□ -1.18
SMG6-202ENST00000354901 PIGBOS1A0A0B4J2F0 54 aa7.7□□□□□ -1.18
SMG6-202ENST00000354901 H0YJW9 148 aa7.7□□□□□ -1.18
SMG6-202ENST00000354901 OR10J3Q5JRS4 329 aa7.7□□□□□ -1.18
SMG6-202ENST00000354901 C19orf24Q9BVV8 132 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms