RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 OR4C5Q8NGB2 326 aa8.69□□□□□ -1.02
RTN3-204ENST00000354497 OR13C5Q8NGS8 318 aa8.69□□□□□ -1.02
RTN3-204ENST00000354497 GPX8Q8TED1 209 aa8.69□□□□□ -1.02
RTN3-204ENST00000354497 ST6GALNAC6Q969X2 333 aa8.69□□□□□ -1.02
RTN3-204ENST00000354497 GPR146Q96CH1 333 aa8.69□□□□□ -1.02
RTN3-204ENST00000354497 RASL11BQ9BPW5 248 aa8.69□□□□□ -1.02
RTN3-204ENST00000354497 SPATA25Q9BR10 227 aa8.69□□□□□ -1.02
RTN3-204ENST00000354497 GNB4Q9HAV0 340 aa8.69□□□□□ -1.02
RTN3-204ENST00000354497 DSCAML1Q8TD84 2053 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 ODAMA1E959 279 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 H3BQ15 152 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 SH2D1BO14796 132 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 SLC25A17O43808 307 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 YPEL1O60688 119 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 OR2H2O95918 312 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 REG1BP48304 166 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 GNB1P62873 340 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 PAFAH1B2P68402 229 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 IL15RAQ13261 267 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 INSL4Q14641 139 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 ATXN7L3Q14CW9 347 aaPredicted RBP8.68□□□□□ -1.02
RTN3-204ENST00000354497 RNASE12Q5GAN4 147 aaKnown RBP8.68□□□□□ -1.02
RTN3-204ENST00000354497 ASPHD1Q5U4P2 390 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 SGPP2Q8IWX5 399 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 RNF152Q8N8N0 203 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 OR4B1Q8NGF8 309 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 OR1L6Q8NGR2 347 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 OR10X1Q8NGY0 326 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 OR5B3Q8NH48 314 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 OR4X1Q8NH49 305 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 SMIM19Q96E16 107 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 RBMXL1Q96E39 390 aaKnown RBP8.68□□□□□ -1.02
RTN3-204ENST00000354497 YPEL2Q96QA6 119 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 MOB1AQ9H8S9 216 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 LIN7CQ9NUP9 197 aaKnown RBP8.68□□□□□ -1.02
RTN3-204ENST00000354497 ZNF230Q9UIE0 474 aaPredicted RBP8.68□□□□□ -1.02
RTN3-204ENST00000354497 RBM7Q9Y580 266 aaKnown RBP8.68□□□□□ -1.02
RTN3-204ENST00000354497 V9GY05 133 aa8.68□□□□□ -1.02
RTN3-204ENST00000354497 TRBV2A0A0J9YWF9 115 aa8.67□□□□□ -1.02
RTN3-204ENST00000354497 IGHG4P01861 327 aa8.67□□□□□ -1.02
RTN3-204ENST00000354497 TYMSP04818 313 aa8.67□□□□□ -1.02
RTN3-204ENST00000354497 ESDP10768 282 aa8.67□□□□□ -1.02
RTN3-204ENST00000354497 FAM3BP58499 235 aaPredicted RBP8.67□□□□□ -1.02
RTN3-204ENST00000354497 CDK5R1Q15078 307 aa8.67□□□□□ -1.02
RTN3-204ENST00000354497 RNF151Q2KHN1 245 aa8.67□□□□□ -1.02
RTN3-204ENST00000354497 C17orf58Q2M2W7 97 aa8.67□□□□□ -1.02
RTN3-204ENST00000354497 SPIN3Q5JUX0 258 aa8.67□□□□□ -1.02
RTN3-204ENST00000354497 HAPLN4Q86UW8 402 aa8.67□□□□□ -1.02
RTN3-204ENST00000354497 OR51A2Q8NGJ7 313 aa8.67□□□□□ -1.02
RTN3-204ENST00000354497 DDB2Q92466 427 aa8.67□□□□□ -1.02
RTN3-204ENST00000354497 EAF1Q96JC9 268 aaPredicted RBP8.67□□□□□ -1.02
RTN3-204ENST00000354497 R4GMQ9 66 aa8.67□□□□□ -1.02
RTN3-204ENST00000354497 DAPL1A0PJW8 107 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 CORTO00230 105 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 HSD17B6O14756 317 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 OR5G3P0C626 314 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 SLURP1P55000 103 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 ROM1Q03395 351 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 ZNF146Q15072 292 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 Q8N9W7 124 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 OR2T10Q8NGZ9 312 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 ARPC1AQ92747 370 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 DLX4Q92988 240 aaPredicted RBP8.66□□□□□ -1.02
RTN3-204ENST00000354497 ATP6V0BQ99437 205 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 HSPB9Q9BQS6 159 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 GINS3Q9BRX5 216 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 SSBP4Q9BWG4 385 aaPredicted RBP8.66□□□□□ -1.02
RTN3-204ENST00000354497 CLEC5AQ9NY25 188 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 CALYQ9NYX4 217 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 KIAA1456Q9P272 454 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 FUT9Q9Y231 359 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 VSIG4Q9Y279 399 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 TMEM14AQ9Y6G1 99 aa8.66□□□□□ -1.02
RTN3-204ENST00000354497 KBTBD11-OT1A0A1B0GTJ5 212 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 HSPB6O14558 160 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 SRSF10O75494 262 aaKnown RBP8.65□□□□□ -1.02
RTN3-204ENST00000354497 SCGNO76038 276 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 ZNF735P0CB33 412 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 OR13C7P0DN81 318 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 PSMB8P28062 276 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 PRSS3P35030 304 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 CFHR3Q02985 330 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 PDZD11Q5EBL8 140 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 AADACL3Q5VUY0 350 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 PRR27Q6MZM9 219 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 FAM71F2Q6NXP2 309 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 IL17DQ8TAD2 202 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 COQ2Q96H96 371 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 NIPSNAP3BQ9BS92 247 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 EIF5A2Q9GZV4 153 aaKnown RBP8.65□□□□□ -1.02
RTN3-204ENST00000354497 KLK15Q9H2R5 256 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 ISG20L2Q9H9L3 353 aaKnown RBP8.65□□□□□ -1.02
RTN3-204ENST00000354497 IDI2-AS1Q9NZ38 188 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 OR6C3Q9NZP0 311 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 UQCR10Q9UDW1 63 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 RNF150Q9ULK6 438 aa8.65□□□□□ -1.02
RTN3-204ENST00000354497 IGHV1-3A0A0C4DH29 117 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 LY6G6CO95867 125 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 HLA-AP01891 365 aaKnown RBP8.64□□□□□ -1.03
RTN3-204ENST00000354497 SRP19P09132 144 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms