RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 PSG7Q13046 419 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 GTF3AQ92664 365 aaKnown RBP8.37□□□□□ -1.07
COL11A1-201ENST00000353414 NRIP2Q9BQI9 281 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 MLNRO43193 412 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 LILRA1O75019 489 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 LHBP01229 141 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 GLRXP35754 106 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 ST20Q9HBF5 79 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 SEPSECSQ9HD40 501 aaKnown RBP8.37□□□□□ -1.07
COL11A1-201ENST00000353414 COL24A1Q17RW2 1714 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 DPRXA6NFQ7 191 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 RNASE6Q93091 150 aaKnown RBP8.37□□□□□ -1.07
COL11A1-201ENST00000353414 IMMP1LQ96LU5 166 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 CITED1Q99966 193 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 HLA-DQA1P01909 254 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 AQP3Q92482 292 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 CEP290O15078 2479 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 SAA2-SAA4A0A096LPE2 208 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 SAA2P0DJI9 122 aaPredicted RBP8.37□□□□□ -1.07
COL11A1-201ENST00000353414 PKIBQ9C010 78 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 C12orf77C9JDV5 145 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 ZNF562Q6V9R5 426 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 MESP1Q9BRJ9 268 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 G6PC2Q9NQR9 355 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 A0A096LPF7 62 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 C17orf100A8MU93 164 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 PYYP10082 97 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 IFI27L2Q9H2X8 130 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 MGAMO43451 1857 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 DOCK11Q5JSL3 2073 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 TMEM187Q14656 261 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 TBR1Q16650 682 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 SUMO4Q6EEV6 95 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 OR2K2Q8NGT1 345 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 SLC25A15Q9Y619 301 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 HLA-DQB1P01920 261 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 RCHY1Q96PM5 261 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 NPCDR1Q9BY65 106 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 DYSFO75923 2080 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 TIMM23O14925 209 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 ZXDCQ2QGD7 858 aaPredicted RBP8.36□□□□□ -1.07
COL11A1-201ENST00000353414 STPG2Q8N412 459 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 COQ2Q96H96 371 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 WDYHV1Q96HA8 205 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 Q96M66 194 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 ALX4Q9H161 411 aaPredicted RBP8.36□□□□□ -1.07
COL11A1-201ENST00000353414 A6NNC1 897 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 NBR2O15453 112 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 DEPPQ9NTK1 212 aa8.36□□□□□ -1.07
COL11A1-201ENST00000353414 RNF223E7ERA6 249 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 RAG2P55895 527 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 PUSL1Q8N0Z8 303 aaKnown RBP8.35□□□□□ -1.07
COL11A1-201ENST00000353414 HIGD1CA8MV81 97 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 MT-ND6P03923 174 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 PRTN3P24158 256 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 JPT2Q9H910 190 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 FCN3O75636 299 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 IFI27P40305 119 aaPredicted RBP8.35□□□□□ -1.07
COL11A1-201ENST00000353414 GATAD1Q8WUU5 269 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 LAMTOR3Q9UHA4 124 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 CHCHD2Q9Y6H1 151 aaPredicted RBP8.35□□□□□ -1.07
COL11A1-201ENST00000353414 DLEC1Q9Y238 1755 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 PINLYPA6NC86 204 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 SIGLEC15Q6ZMC9 328 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 NAA38Q9BRA0 125 aaKnown RBP8.35□□□□□ -1.07
COL11A1-201ENST00000353414 SLC25A39Q9BZJ4 359 aaPredicted RBP8.35□□□□□ -1.07
COL11A1-201ENST00000353414 NHP2Q9NX24 153 aaKnown RBP8.35□□□□□ -1.07
COL11A1-201ENST00000353414 RBBP6Q7Z6E9 1792 aaKnown RBP8.35□□□□□ -1.07
COL11A1-201ENST00000353414 KBTBD11-OT1A0A1B0GTJ5 212 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 NPIPB13A6NJU9 1138 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 NPIPB5A8MRT5 1133 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 VAX1Q5SQQ9 334 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 FREM3P0C091 2139 aa8.35□□□□□ -1.07
COL11A1-201ENST00000353414 IGHV3-16A0A0C4DH30 117 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 DMRTC2Q8IXT2 367 aaPredicted RBP8.34□□□□□ -1.07
COL11A1-201ENST00000353414 MRPL32Q9BYC8 188 aaKnown RBP8.34□□□□□ -1.07
COL11A1-201ENST00000353414 TMEM8BA6NDV4 472 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.34□□□□□ -1.07
COL11A1-201ENST00000353414 PAX4O43316 350 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 LIMS1P48059 325 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 RUSC1-AS1Q66K80 236 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 ZNF257Q9Y2Q1 563 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 WNT2P09544 360 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 PAX8Q06710 450 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 Q5BKY6 102 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 PRADC1Q9BSG0 188 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 A0A0G2JK05 382 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 RPL32P62910 135 aaKnown RBP8.34□□□□□ -1.07
COL11A1-201ENST00000353414 DTX2Q86UW9 622 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 TNFRSF14Q92956 283 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 CEP250Q9BV73 2442 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 MBNL3Q9NUK0 354 aaKnown RBP8.34□□□□□ -1.07
COL11A1-201ENST00000353414 C19orf67A6NJJ6 358 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 NDUFS8O00217 210 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 CD300EQ496F6 205 aaPredicted RBP8.34□□□□□ -1.07
COL11A1-201ENST00000353414 PAPPA-AS1Q5QFB9 102 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 FAM166AQ6J272 317 aa8.34□□□□□ -1.07
COL11A1-201ENST00000353414 TRAV5A0A0B4J249 113 aa8.33□□□□□ -1.08
COL11A1-201ENST00000353414 SDHCQ99643 169 aaPredicted RBP8.33□□□□□ -1.08
COL11A1-201ENST00000353414 SLC25A2Q9BXI2 301 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms