RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 PPOXP50336 477 aa17.82■□□□□ 0.44
UPF3A-201ENST00000351487 SUMO1P63165 101 aaKnown RBP17.82■□□□□ 0.44
UPF3A-201ENST00000351487 UBE2L3P68036 154 aaKnown RBP17.82■□□□□ 0.44
UPF3A-201ENST00000351487 TIGITQ495A1 244 aa17.82■□□□□ 0.44
UPF3A-201ENST00000351487 PVRIGQ6DKI7 326 aa17.82■□□□□ 0.44
UPF3A-201ENST00000351487 IGF2BP2-AS1Q96M15 143 aa17.82■□□□□ 0.44
UPF3A-201ENST00000351487 OSTCQ9NRP0 149 aa17.82■□□□□ 0.44
UPF3A-201ENST00000351487 PIEZO2Q9H5I5 2752 aa17.82■□□□□ 0.44
UPF3A-201ENST00000351487 NPIPB3Q92617 1050 aa17.82■□□□□ 0.44
UPF3A-201ENST00000351487 RITA1Q96K30 269 aa17.82■□□□□ 0.44
UPF3A-201ENST00000351487 COX7A2P2O60397 106 aa17.81■□□□□ 0.44
UPF3A-201ENST00000351487 BPIFB3P59826 476 aa17.81■□□□□ 0.44
UPF3A-201ENST00000351487 DEFA6Q01524 100 aa17.81■□□□□ 0.44
UPF3A-201ENST00000351487 TEX45Q8NA69 505 aa17.81■□□□□ 0.44
UPF3A-201ENST00000351487 OR5AU1Q8NGC0 362 aa17.81■□□□□ 0.44
UPF3A-201ENST00000351487 IGLC7A0M8Q6 106 aa17.8■□□□□ 0.44
UPF3A-201ENST00000351487 C10orf113Q5VZT2 155 aa17.8■□□□□ 0.44
UPF3A-201ENST00000351487 ZNF355PQ9NSJ1 428 aa17.8■□□□□ 0.44
UPF3A-201ENST00000351487 RALYQ9UKM9 306 aaKnown RBP17.8■□□□□ 0.44
UPF3A-201ENST00000351487 TRAV5A0A0B4J249 113 aa17.8■□□□□ 0.44
UPF3A-201ENST00000351487 FSTL3O95633 263 aa17.8■□□□□ 0.44
UPF3A-201ENST00000351487 IGLV1-47P01700 117 aa17.8■□□□□ 0.44
UPF3A-201ENST00000351487 IGLV2-8P01709 118 aa17.8■□□□□ 0.44
UPF3A-201ENST00000351487 CBLN1P23435 193 aa17.8■□□□□ 0.44
UPF3A-201ENST00000351487 MRPL41Q8IXM3 137 aaKnown RBP17.8■□□□□ 0.44
UPF3A-201ENST00000351487 MRPL36Q9P0J6 103 aaKnown RBP17.8■□□□□ 0.44
UPF3A-201ENST00000351487 TRBV9A0A0B4J1U6 114 aa17.79■□□□□ 0.44
UPF3A-201ENST00000351487 IGHV2-26A0A0B4J1V2 119 aa17.79■□□□□ 0.44
UPF3A-201ENST00000351487 ISLRO14498 428 aa17.79■□□□□ 0.44
UPF3A-201ENST00000351487 CRYGCP07315 174 aa17.79■□□□□ 0.44
UPF3A-201ENST00000351487 PATE2Q6UY27 113 aa17.79■□□□□ 0.44
UPF3A-201ENST00000351487 SPTBN2O15020 2390 aa17.79■□□□□ 0.44
UPF3A-201ENST00000351487 DDTP30046 118 aa17.79■□□□□ 0.44
UPF3A-201ENST00000351487 ETFRF1Q6IPR1 90 aa17.79■□□□□ 0.44
UPF3A-201ENST00000351487 TMEM256Q8N2U0 113 aa17.79■□□□□ 0.44
UPF3A-201ENST00000351487 SCNM1Q9BWG6 230 aa17.79■□□□□ 0.44
UPF3A-201ENST00000351487 PLXNB1O43157 2135 aa17.79■□□□□ 0.44
UPF3A-201ENST00000351487 CRYGBP07316 175 aa17.78■□□□□ 0.44
UPF3A-201ENST00000351487 OR1L6Q8NGR2 347 aa17.78■□□□□ 0.44
UPF3A-201ENST00000351487 MRPL18Q9H0U6 180 aaKnown RBP17.78■□□□□ 0.44
UPF3A-201ENST00000351487 CDC42EP3Q9UKI2 254 aa17.78■□□□□ 0.44
UPF3A-201ENST00000351487 SMG1Q96Q15 3661 aaKnown RBP17.78■□□□□ 0.44
UPF3A-201ENST00000351487 IGHV3-72A0A0B4J1Y9 119 aa17.78■□□□□ 0.44
UPF3A-201ENST00000351487 TAS2R60P59551 318 aa17.78■□□□□ 0.44
UPF3A-201ENST00000351487 ZNF841Q6ZN19 808 aa17.78■□□□□ 0.44
UPF3A-201ENST00000351487 PAXXQ9BUH6 204 aa17.78■□□□□ 0.44
UPF3A-201ENST00000351487 A0A1B0GUS0 222 aa17.77■□□□□ 0.44
UPF3A-201ENST00000351487 ENSAO43768 121 aaKnown RBP17.77■□□□□ 0.44
UPF3A-201ENST00000351487 PLAUP00749 431 aa17.77■□□□□ 0.44
UPF3A-201ENST00000351487 PRRX1P54821 245 aa17.77■□□□□ 0.44
UPF3A-201ENST00000351487 CASP6P55212 293 aa17.77■□□□□ 0.44
UPF3A-201ENST00000351487 OR8I2Q8N0Y5 310 aa17.77■□□□□ 0.44
UPF3A-201ENST00000351487 RNASE7Q9H1E1 156 aaKnown RBP17.77■□□□□ 0.44
UPF3A-201ENST00000351487 PRO1933Q9H354 126 aa17.77■□□□□ 0.44
UPF3A-201ENST00000351487 ADGRG4Q8IZF6 3080 aa17.77■□□□□ 0.43
UPF3A-201ENST00000351487 MALRD1Q5VYJ5 2156 aa17.77■□□□□ 0.43
UPF3A-201ENST00000351487 REG1AP05451 166 aa17.76■□□□□ 0.43
UPF3A-201ENST00000351487 FAM87AP0C7U9 286 aa17.76■□□□□ 0.43
UPF3A-201ENST00000351487 CX3CL1P78423 397 aa17.76■□□□□ 0.43
UPF3A-201ENST00000351487 FBXL19-AS1Q494R0 122 aa17.76■□□□□ 0.43
UPF3A-201ENST00000351487 GNB1LQ9BYB4 327 aa17.76■□□□□ 0.43
UPF3A-201ENST00000351487 DMXL2Q8TDJ6 3036 aa17.76■□□□□ 0.43
UPF3A-201ENST00000351487 IGHV3-48P01763 117 aa17.76■□□□□ 0.43
UPF3A-201ENST00000351487 RBP4P02753 201 aa17.76■□□□□ 0.43
UPF3A-201ENST00000351487 PYYP10082 97 aa17.76■□□□□ 0.43
UPF3A-201ENST00000351487 RPL27AP46776 148 aaKnown RBP17.76■□□□□ 0.43
UPF3A-201ENST00000351487 RPL19P84098 196 aaKnown RBP17.76■□□□□ 0.43
UPF3A-201ENST00000351487 PAX2Q02962 417 aa17.76■□□□□ 0.43
UPF3A-201ENST00000351487 BEND2Q8NDZ0 799 aa17.76■□□□□ 0.43
UPF3A-201ENST00000351487 C14orf144Q96I85 54 aa17.76■□□□□ 0.43
UPF3A-201ENST00000351487 PTPRQQ9UMZ3 2332 aa17.76■□□□□ 0.43
UPF3A-201ENST00000351487 NUPR1O60356 82 aa17.75■□□□□ 0.43
UPF3A-201ENST00000351487 ESDP10768 282 aa17.75■□□□□ 0.43
UPF3A-201ENST00000351487 TP53TG3Q9ULZ0 132 aa17.75■□□□□ 0.43
UPF3A-201ENST00000351487 PTPRZ1P23471 2315 aaPredicted RBP17.75■□□□□ 0.43
UPF3A-201ENST00000351487 C22orf46C9J442 243 aa17.75■□□□□ 0.43
UPF3A-201ENST00000351487 IER3P46695 156 aa17.75■□□□□ 0.43
UPF3A-201ENST00000351487 MFAP2P55001 183 aa17.75■□□□□ 0.43
UPF3A-201ENST00000351487 IQCJQ1A5X6 159 aa17.75■□□□□ 0.43
UPF3A-201ENST00000351487 ZNF664Q8N3J9 261 aa17.75■□□□□ 0.43
UPF3A-201ENST00000351487 FXYD5Q96DB9 178 aa17.75■□□□□ 0.43
UPF3A-201ENST00000351487 TRGV9Q99603 122 aa17.75■□□□□ 0.43
UPF3A-201ENST00000351487 CLEC7AQ9BXN2 247 aa17.75■□□□□ 0.43
UPF3A-201ENST00000351487 SIGLEC9Q9Y336 463 aa17.75■□□□□ 0.43
UPF3A-201ENST00000351487 IGHV1-3A0A0C4DH29 117 aa17.74■□□□□ 0.43
UPF3A-201ENST00000351487 GRIFINA4D1Z8 144 aa17.74■□□□□ 0.43
UPF3A-201ENST00000351487 SNURFLB1AK76 121 aa17.74■□□□□ 0.43
UPF3A-201ENST00000351487 BUB1B-PAK6H3BSN5 160 aa17.74■□□□□ 0.43
UPF3A-201ENST00000351487 FCN1O00602 326 aa17.74■□□□□ 0.43
UPF3A-201ENST00000351487 COMPP49747 757 aaPredicted RBP17.74■□□□□ 0.43
UPF3A-201ENST00000351487 COX19Q49B96 90 aa17.74■□□□□ 0.43
UPF3A-201ENST00000351487 IBA57Q5T440 356 aaKnown RBP17.74■□□□□ 0.43
UPF3A-201ENST00000351487 ZNF329Q86UD4 541 aa17.74■□□□□ 0.43
UPF3A-201ENST00000351487 MUC15Q8N387 334 aa17.74■□□□□ 0.43
UPF3A-201ENST00000351487 TNFRSF19Q9NS68 423 aa17.74■□□□□ 0.43
UPF3A-201ENST00000351487 AMMECR1Q9Y4X0 333 aaPredicted RBP17.74■□□□□ 0.43
UPF3A-201ENST00000351487 TLN1Q9Y490 2541 aaKnown RBP17.74■□□□□ 0.43
UPF3A-201ENST00000351487 MT-ND6P03923 174 aa17.74■□□□□ 0.43
UPF3A-201ENST00000351487 TNXAQ16473 311 aa17.74■□□□□ 0.43
UPF3A-201ENST00000351487 REC114Q7Z4M0 266 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms