RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 SELENOTP62341 195 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 LINC00518Q8N0U6 118 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 OR1P1Q8NH06 330 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 MRPL36Q9P0J6 103 aaKnown RBP16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 NAV3Q8IVL0 2385 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 IGSF10Q6WRI0 2623 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 TEX22C9J3V5 150 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 IGHV3-48P01763 117 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 C8orf88P0DMB2 117 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 KLRD1Q13241 179 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 KIR3DL3Q8N743 410 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 C11orf52Q96A22 123 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 MISP3Q96FF7 219 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 UHRF2Q96PU4 802 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 TGOLN2O43493 480 aa16.27■□□□□ 0.2
CHRNA3-202ENST00000348639 OR7C2O60412 319 aa16.27■□□□□ 0.2
CHRNA3-202ENST00000348639 EFNA4P52798 201 aa16.27■□□□□ 0.2
CHRNA3-202ENST00000348639 CFHR4Q92496 578 aa16.27■□□□□ 0.2
CHRNA3-202ENST00000348639 OR5B12Q96R08 314 aa16.27■□□□□ 0.2
CHRNA3-202ENST00000348639 HILPDAQ9Y5L2 63 aa16.27■□□□□ 0.2
CHRNA3-202ENST00000348639 AP4M1O00189 453 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 CORTO00230 105 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 CD99P14209 185 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 GALR1P47211 349 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 PAX2Q02962 417 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 ZNF90Q03938 601 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 OR1L4Q8NGR5 311 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 PFDN5Q99471 154 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 PYGO2Q9BRQ0 406 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 TRBV20OR9-2A0A075B6H5 130 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 A0A1W2PRD5 423 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 A0A1W2PRF3 423 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 A0A1W2PRM7 423 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 FCN1O00602 326 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 APELAP0DMC3 54 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 S100PP25815 95 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 PLGLAQ15195 96 aa16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 SRSF12Q8WXF0 261 aaKnown RBP16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 F11RQ9Y624 299 aaKnown RBP16.26■□□□□ 0.19
CHRNA3-202ENST00000348639 COX7A2P2O60397 106 aa16.25■□□□□ 0.19
CHRNA3-202ENST00000348639 ZFP36P26651 326 aaKnown RBP16.25■□□□□ 0.19
CHRNA3-202ENST00000348639 FABP9Q0Z7S8 132 aa16.25■□□□□ 0.19
CHRNA3-202ENST00000348639 LHFPL4Q7Z7J7 247 aa16.25■□□□□ 0.19
CHRNA3-202ENST00000348639 TMEM116Q8NCL8 245 aa16.25■□□□□ 0.19
CHRNA3-202ENST00000348639 OR5T1Q8NG75 326 aa16.25■□□□□ 0.19
CHRNA3-202ENST00000348639 SRSF8Q9BRL6 282 aaKnown RBP16.25■□□□□ 0.19
CHRNA3-202ENST00000348639 AKAP6Q13023 2319 aa16.25■□□□□ 0.19
CHRNA3-202ENST00000348639 COL12A1Q99715 3063 aa16.25■□□□□ 0.19
CHRNA3-202ENST00000348639 TRGC2P03986 189 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 MMDQ15546 238 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 NECAP1Q8NC96 275 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 C22orf15Q8WYQ4 148 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 FAM167A-AS1Q96KT0 104 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 BPIFB3P59826 476 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 C10orf113Q5VZT2 155 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 C19orf35Q6ZS72 473 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 VMO1Q7Z5L0 202 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 NPBQ8NG41 125 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 OR4X1Q8NH49 305 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 IGFBPL1Q8WX77 278 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 TRGV9Q99603 122 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 SLC25A2Q9BXI2 301 aa16.24■□□□□ 0.19
CHRNA3-202ENST00000348639 NBR2O15453 112 aa16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 MOSP00540 346 aa16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 MORN5Q5VZ52 161 aa16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 RUSC1-AS1Q66K80 236 aa16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 PATE2Q6UY27 113 aa16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 TNFRSF19Q9NS68 423 aa16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 SPTAN1Q13813 2472 aaKnown RBP16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 PGPEP1LA6NFU8 196 aa16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 NDUFA3O95167 84 aa16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 OR10J4P0C629 311 aa16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 SRP14P37108 136 aaKnown RBP16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 LCN2P80188 198 aa16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 ELOVL1Q9BW60 279 aa16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 AURKAIP1Q9NWT8 199 aaPredicted RBP16.23■□□□□ 0.19
CHRNA3-202ENST00000348639 CACNA1BQ00975 2339 aa16.22■□□□□ 0.19
CHRNA3-202ENST00000348639 TRAV5A0A0B4J249 113 aa16.22■□□□□ 0.19
CHRNA3-202ENST00000348639 A0A1W2PRE2 83 aa16.22■□□□□ 0.19
CHRNA3-202ENST00000348639 PPP1R2P9O14990 202 aa16.22■□□□□ 0.19
CHRNA3-202ENST00000348639 DMRT1Q9Y5R6 373 aa16.22■□□□□ 0.19
CHRNA3-202ENST00000348639 ELOA3CA0A087WX78 387 aaPredicted RBP16.21■□□□□ 0.19
CHRNA3-202ENST00000348639 C9JCJ5 164 aa16.21■□□□□ 0.19
CHRNA3-202ENST00000348639 CCDC144NLQ6NUI1 221 aa16.21■□□□□ 0.19
CHRNA3-202ENST00000348639 OCC1Q8TAD7 63 aa16.21■□□□□ 0.19
CHRNA3-202ENST00000348639 EAF1Q96JC9 268 aaPredicted RBP16.21■□□□□ 0.19
CHRNA3-202ENST00000348639 SRD5A3Q9H8P0 318 aa16.21■□□□□ 0.19
CHRNA3-202ENST00000348639 ZNF355PQ9NSJ1 428 aa16.21■□□□□ 0.19
CHRNA3-202ENST00000348639 LY96Q9Y6Y9 160 aa16.21■□□□□ 0.19
CHRNA3-202ENST00000348639 OOSP1A8MZH6 123 aa16.21■□□□□ 0.18
CHRNA3-202ENST00000348639 HIST1H2BKO60814 126 aa16.21■□□□□ 0.18
CHRNA3-202ENST00000348639 CNIH1O95406 144 aa16.21■□□□□ 0.18
CHRNA3-202ENST00000348639 HIST1H2BJP06899 126 aa16.21■□□□□ 0.18
CHRNA3-202ENST00000348639 HIST1H2BOP23527 126 aa16.21■□□□□ 0.18
CHRNA3-202ENST00000348639 CD24P25063 80 aa16.21■□□□□ 0.18
CHRNA3-202ENST00000348639 HIST1H2BBP33778 126 aa16.21■□□□□ 0.18
CHRNA3-202ENST00000348639 HIST1H2BDP58876 126 aa16.21■□□□□ 0.18
CHRNA3-202ENST00000348639 HIST1H2BCP62807 126 aa16.21■□□□□ 0.18
CHRNA3-202ENST00000348639 HIST2H2BEQ16778 126 aa16.21■□□□□ 0.18
CHRNA3-202ENST00000348639 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms