RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 VENTXO95231 258 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 CXorf1O96002 111 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 RPL29P47914 159 aaKnown RBP4.86□□□□□ -1.63
CLCN3-201ENST00000347613 TCL1AP56279 114 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 ERVK-16P61578 105 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 GDF5OSQ5U4N7 250 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 PQLC2Q6ZP29 291 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 GBGT1Q8N5D6 347 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 RCHY1Q96PM5 261 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 ZNF705GA8MUZ8 300 aaPredicted RBP4.86□□□□□ -1.63
CLCN3-201ENST00000347613 A8MWP6 167 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 TMEM178BH3BS89 294 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 CORTO00230 105 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 PDE6DO43924 150 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 BRI3O95415 125 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 LOXP28300 417 aaPredicted RBP4.86□□□□□ -1.63
CLCN3-201ENST00000347613 NBL1P41271 181 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 POU2AF1Q16633 256 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 LINC00322Q6ZN03 302 aaPredicted RBP4.86□□□□□ -1.63
CLCN3-201ENST00000347613 Q6ZWC4 215 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 BCL6BQ8N143 479 aaPredicted RBP4.86□□□□□ -1.63
CLCN3-201ENST00000347613 TRAPPC1Q9Y5R8 145 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 ZANQ9Y493 2812 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 F6UZH7 168 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 EREGO14944 169 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 DDTP30046 118 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 COMPP49747 757 aaPredicted RBP4.86□□□□□ -1.63
CLCN3-201ENST00000347613 FOXL1Q12952 345 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 CENPWQ5EE01 88 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 LEMD1Q68G75 181 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 RNASEH2CQ8TDP1 164 aaKnown RBP4.86□□□□□ -1.63
CLCN3-201ENST00000347613 SSBP3Q9BWW4 388 aaPredicted RBP4.86□□□□□ -1.63
CLCN3-201ENST00000347613 ZNF430Q9H8G1 570 aaPredicted RBP4.86□□□□□ -1.63
CLCN3-201ENST00000347613 POLR3KQ9Y2Y1 108 aaPredicted RBP4.86□□□□□ -1.63
CLCN3-201ENST00000347613 AREGP15514 252 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 SRP14P37108 136 aaKnown RBP4.85□□□□□ -1.63
CLCN3-201ENST00000347613 CNN1P51911 297 aaKnown RBP4.85□□□□□ -1.63
CLCN3-201ENST00000347613 SUMO1P63165 101 aaKnown RBP4.85□□□□□ -1.63
CLCN3-201ENST00000347613 GNG5P63218 68 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 HCP5Q6MZN7 132 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 OR8I2Q8N0Y5 310 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 KIR3DL3Q8N743 410 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 OR5AN1Q8NGI8 311 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 H1FXQ92522 213 aaKnown RBP4.85□□□□□ -1.63
CLCN3-201ENST00000347613 ACY3Q96HD9 319 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 IGF2BP2-AS1Q96M15 143 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 OR5B12Q96R08 314 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 ATG101Q9BSB4 218 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 JKAMPQ9P055 326 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 RNF24Q9Y225 148 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 AKAP6Q13023 2319 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 COL6A6A6NMZ7 2263 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 A0A1W2PPI3 338 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 FCN1O00602 326 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 ITGB1BP1O14713 200 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 IER3P46695 156 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 HARBI1Q96MB7 349 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 SLC25A33Q9BSK2 321 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 SFXN3Q9BWM7 321 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 ANKHD1Q8IWZ3 2542 aaKnown RBP4.85□□□□□ -1.63
CLCN3-201ENST00000347613 PIGBOS1A0A0B4J2F0 54 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 HSBP1L1C9JCN9 74 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 MPDU1O75352 247 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 SERF1AO75920 110 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 MOSP00540 346 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 RAB7AP51149 207 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 NHLH1Q02575 133 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 CD69Q07108 199 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 Q8N976 141 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 NUP37Q8NFH4 326 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 NPIPB3Q92617 1050 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 C11orf52Q96A22 123 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 PLEKHA3Q9HB20 300 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 CACNA1BQ00975 2339 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 SPTA1P02549 2419 aa4.85□□□□□ -1.63
CLCN3-201ENST00000347613 A6NNC1 897 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 FAM87AP0C7U9 286 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 RAB4BP61018 213 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 YPEL3P61236 119 aaPredicted RBP4.84□□□□□ -1.63
CLCN3-201ENST00000347613 LINC01560Q8TB33 94 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 TMEM160Q9NX00 188 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 CBY1Q9Y3M2 126 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 LINC00312Q9Y6C7 94 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 ZNF785A8K8V0 405 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 C16orf97H3BN30 126 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 OR7C2O60412 319 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 TNFSF4P23510 183 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 RHOBP62745 196 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 C2orf83Q53S99 150 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 MMD2Q8IY49 270 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 OR5R1Q8NH85 324 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 MRPL18Q9H0U6 180 aaKnown RBP4.84□□□□□ -1.63
CLCN3-201ENST00000347613 BET1LQ9NYM9 111 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 TP73-AS1Q9UF72 201 aa4.84□□□□□ -1.63
CLCN3-201ENST00000347613 OR5G3P0C626 314 aa4.84□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.84□□□□□ -1.64
CLCN3-201ENST00000347613 RNASE6Q93091 150 aaKnown RBP4.84□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF714Q96N38 554 aa4.84□□□□□ -1.64
CLCN3-201ENST00000347613 SAP30LQ9HAJ7 183 aa4.84□□□□□ -1.64
CLCN3-201ENST00000347613 TMEM106BQ9NUM4 274 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms