RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 POM121Q96HA1 1249 aa10.84□□□□□ -0.67
CASC4-202ENST00000345795 TUBG2Q9NRH3 451 aa10.84□□□□□ -0.67
CASC4-202ENST00000345795 TECRQ9NZ01 308 aaKnown RBP10.84□□□□□ -0.67
CASC4-202ENST00000345795 FOXA2Q9Y261 457 aaPredicted RBP10.84□□□□□ -0.67
CASC4-202ENST00000345795 TRBV6-6A0A0A6YYG2 114 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 TRAV8-1A0A0A6YYK1 113 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 A0A1W2PN81 502 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 FAM90A26D6RGX4 464 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 OR2J3O76001 311 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 HTR1DP28221 377 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 FCGR2BP31994 310 aaPredicted RBP10.83□□□□□ -0.68
CASC4-202ENST00000345795 Q6ZS49 121 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 VKORC1Q9BQB6 163 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 PAXXQ9BUH6 204 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 CLEC7AQ9BXN2 247 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 ELOVL5Q9NYP7 299 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 LOC105371242A0A075B767 164 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 SERTM2A0A1B0GWG4 89 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 CENPWQ5EE01 88 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 OR5B3Q8NH48 314 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 RASL11BQ9BPW5 248 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 SLC45A2Q9UMX9 530 aa10.83□□□□□ -0.68
CASC4-202ENST00000345795 UPK2O00526 184 aa10.82□□□□□ -0.68
CASC4-202ENST00000345795 IGHV1-8P0DP01 117 aa10.82□□□□□ -0.68
CASC4-202ENST00000345795 KIR2DS2P43631 304 aa10.82□□□□□ -0.68
CASC4-202ENST00000345795 PRNTQ86SH4 94 aa10.82□□□□□ -0.68
CASC4-202ENST00000345795 LINC00518Q8N0U6 118 aa10.82□□□□□ -0.68
CASC4-202ENST00000345795 WDR83OSQ9Y284 106 aa10.82□□□□□ -0.68
CASC4-202ENST00000345795 UTP20O75691 2785 aaKnown RBP10.82□□□□□ -0.68
CASC4-202ENST00000345795 CLN5O75503 358 aa10.82□□□□□ -0.68
CASC4-202ENST00000345795 FABP1P07148 127 aa10.82□□□□□ -0.68
CASC4-202ENST00000345795 BPIFB3P59826 476 aa10.82□□□□□ -0.68
CASC4-202ENST00000345795 FAM90A2PQ658T7 463 aa10.82□□□□□ -0.68
CASC4-202ENST00000345795 OCC1Q8TAD7 63 aa10.82□□□□□ -0.68
CASC4-202ENST00000345795 VSTM2AQ8TAG5 236 aa10.82□□□□□ -0.68
CASC4-202ENST00000345795 TMEM133Q9H2Q1 129 aa10.82□□□□□ -0.68
CASC4-202ENST00000345795 YTHDF2Q9Y5A9 579 aaKnown RBP10.82□□□□□ -0.68
CASC4-202ENST00000345795 IGHV2-26A0A0B4J1V2 119 aa10.81□□□□□ -0.68
CASC4-202ENST00000345795 PDPNQ86YL7 162 aa10.81□□□□□ -0.68
CASC4-202ENST00000345795 CORO2AQ92828 525 aa10.81□□□□□ -0.68
CASC4-202ENST00000345795 PACRGQ96M98 296 aaPredicted RBP10.81□□□□□ -0.68
CASC4-202ENST00000345795 RBM14Q96PK6 669 aaKnown RBP10.81□□□□□ -0.68
CASC4-202ENST00000345795 SDF2L1Q9HCN8 221 aa10.81□□□□□ -0.68
CASC4-202ENST00000345795 ANKRD17O75179 2603 aaKnown RBP10.81□□□□□ -0.68
CASC4-202ENST00000345795 AGAP20933 346 aa10.81□□□□□ -0.68
CASC4-202ENST00000345795 CNN1P51911 297 aaKnown RBP10.81□□□□□ -0.68
CASC4-202ENST00000345795 FOXA3P55318 350 aaPredicted RBP10.81□□□□□ -0.68
CASC4-202ENST00000345795 HEPN1Q6WQI6 88 aa10.81□□□□□ -0.68
CASC4-202ENST00000345795 PSMG3Q9BT73 122 aaPredicted RBP10.81□□□□□ -0.68
CASC4-202ENST00000345795 SEBOXQ9HB31 216 aaPredicted RBP10.81□□□□□ -0.68
CASC4-202ENST00000345795 KCNIP2Q9NS61 270 aa10.81□□□□□ -0.68
CASC4-202ENST00000345795 FKBP11Q9NYL4 201 aa10.81□□□□□ -0.68
CASC4-202ENST00000345795 TIMM9Q9Y5J7 89 aa10.81□□□□□ -0.68
CASC4-202ENST00000345795 LOXP28300 417 aaPredicted RBP10.81□□□□□ -0.68
CASC4-202ENST00000345795 MANBALQ9NQG1 85 aa10.81□□□□□ -0.68
CASC4-202ENST00000345795 H0YJW9 148 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 RBFOX2O43251 390 aaKnown RBP eCLIP10.8□□□□□ -0.68
CASC4-202ENST00000345795 AMY1AP04745 511 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 IL4P05112 153 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 ZNF331Q9NQX6 463 aaPredicted RBP10.8□□□□□ -0.68
CASC4-202ENST00000345795 HIST1H2BKO60814 126 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 CEACAM4O75871 244 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 HIST1H2BJP06899 126 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 HIST1H2BOP23527 126 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 HIST1H2BBP33778 126 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 MFAP2P55001 183 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 HIST1H2BDP58876 126 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 HIST1H2BCP62807 126 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 HIST2H2BEQ16778 126 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.8□□□□□ -0.68
CASC4-202ENST00000345795 ATOH7Q8N100 152 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 DEFB104AQ8WTQ1 72 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 HIST1H2BHQ93079 126 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 HIST1H2BNQ99877 126 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 HIST1H2BMQ99879 126 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 SSBP4Q9BWG4 385 aaPredicted RBP10.8□□□□□ -0.68
CASC4-202ENST00000345795 DNAJC4Q9NNZ3 241 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 CFAP46Q8IYW2 2715 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 DCHS2Q6V1P9 2916 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 MORN5Q5VZ52 161 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 DMRTA1Q5VZB9 504 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 MSRB2Q9Y3D2 182 aa10.8□□□□□ -0.68
CASC4-202ENST00000345795 SHISA9B4DS77 424 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 IGHV3-11P01762 117 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 LIPFP07098 398 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 WT1-ASQ06250 92 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 CDPF1Q6NVV7 123 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 WFDC3Q8IUB2 231 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 OR1L6Q8NGR2 347 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 SRSF12Q8WXF0 261 aaKnown RBP10.79□□□□□ -0.68
CASC4-202ENST00000345795 USF1P22415 310 aaPredicted RBP10.79□□□□□ -0.68
CASC4-202ENST00000345795 COL8A1P27658 744 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 ZNF705AQ6ZN79 300 aaPredicted RBP10.79□□□□□ -0.68
CASC4-202ENST00000345795 BPESC1Q9GZL8 116 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 WNT10AQ9GZT5 417 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 HIF1ANQ9NWT6 349 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 CXorf65A6NEN9 183 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 OR2T8A6NH00 312 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 GZMBP10144 247 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 TFPI2P48307 235 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms