RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 LCN12Q6JVE5 192 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 FOXA2Q9Y261 457 aaPredicted RBP6.71□□□□□ -1.33
UBE4B-202ENST00000343090 POLEQ07864 2286 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 DENND4AQ7Z401 1863 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 GAGE12BA1L429 117 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 A1L4Q6 167 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 FOXI3A8MTJ6 420 aaPredicted RBP6.71□□□□□ -1.33
UBE4B-202ENST00000343090 NTN3O00634 580 aaPredicted RBP6.71□□□□□ -1.33
UBE4B-202ENST00000343090 LIPFP07098 398 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 ZNF883P0CG24 379 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 ANOS1P23352 680 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 ID1P41134 155 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 GNG5P63218 68 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 MORN2Q502X0 79 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 ZNF524Q96C55 264 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 ABHD17AQ96GS6 310 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 C19orf24Q9BVV8 132 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 CA1P00915 261 aaPredicted RBP6.71□□□□□ -1.34
UBE4B-202ENST00000343090 TM4SF20Q53R12 229 aa6.71□□□□□ -1.34
UBE4B-202ENST00000343090 OR10J3Q5JRS4 329 aa6.71□□□□□ -1.34
UBE4B-202ENST00000343090 AGMATQ9BSE5 352 aa6.71□□□□□ -1.34
UBE4B-202ENST00000343090 ELOVL5Q9NYP7 299 aa6.71□□□□□ -1.34
UBE4B-202ENST00000343090 NLRC5Q86WI3 1866 aa6.71□□□□□ -1.34
UBE4B-202ENST00000343090 NPIPB11E5RHQ5 1161 aa6.71□□□□□ -1.34
UBE4B-202ENST00000343090 C3orf79P0CE67 100 aa6.71□□□□□ -1.34
UBE4B-202ENST00000343090 STAG3L2P0CL84 134 aa6.71□□□□□ -1.34
UBE4B-202ENST00000343090 CD24P25063 80 aa6.71□□□□□ -1.34
UBE4B-202ENST00000343090 CX3CL1P78423 397 aa6.71□□□□□ -1.34
UBE4B-202ENST00000343090 STPG4Q8N801 248 aa6.71□□□□□ -1.34
UBE4B-202ENST00000343090 OR10J6PQ8NGY7 276 aa6.71□□□□□ -1.34
UBE4B-202ENST00000343090 OSR1Q8TAX0 266 aaPredicted RBP6.71□□□□□ -1.34
UBE4B-202ENST00000343090 IGHV1-18A0A0C4DH31 117 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 PEX7O00628 323 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 HBBP68871 147 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 FOXL1Q12952 345 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 PRR31Q5SQ13 230 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 C1orf162Q8NEQ5 155 aaPredicted RBP6.7□□□□□ -1.34
UBE4B-202ENST00000343090 OCC1Q8TAD7 63 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 NAA38Q9BRA0 125 aaKnown RBP6.7□□□□□ -1.34
UBE4B-202ENST00000343090 LYNX1G3V0Z9 82 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 SS18L1O75177 396 aaPredicted RBP6.7□□□□□ -1.34
UBE4B-202ENST00000343090 LYNX1P0DP58 116 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 TMPRSS3P57727 454 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 LINC00205P59089 165 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 Q6ZWC4 215 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 PSPNO60542 156 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 IGKV1D-33P01593 117 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 IGKV1-33P01594 117 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 APOBEC3AP31941 199 aaPredicted RBP6.7□□□□□ -1.34
UBE4B-202ENST00000343090 LINC01551Q86U37 167 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 LYPD6BQ8NI32 183 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 GTSF1LQ9H1H1 148 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 B9A039 149 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 CCL25O15444 150 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 PYYP10082 97 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 Q6ZVH6 145 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 SSBP4Q9BWG4 385 aaPredicted RBP6.7□□□□□ -1.34
UBE4B-202ENST00000343090 GNB1LQ9BYB4 327 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 CRIM1Q9NZV1 1036 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 THADAQ6YHU6 1953 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 ESDP10768 282 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 DLX1P56177 255 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 TBR1Q16650 682 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 OR52E5Q8NH55 327 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 METRNQ9UJH8 293 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 FBXL7Q9UJT9 491 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 AKAP6Q13023 2319 aa6.7□□□□□ -1.34
UBE4B-202ENST00000343090 H7C2G1 150 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 PSG9Q00887 426 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 OR1N2Q8NGR9 330 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 C18orf15Q96N68 181 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 KIR2DL5BA0A0G2JN68 375 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 KIR2DL5BA0A0G2JPC4 375 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 C17orf100A8MU93 164 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 M0R3E3 92 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 IGKV3-20P01619 116 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 DUTP33316 252 aaKnown RBP6.69□□□□□ -1.34
UBE4B-202ENST00000343090 HIST1H1AQ02539 215 aaPredicted RBP6.69□□□□□ -1.34
UBE4B-202ENST00000343090 KIR2DL5AQ8N109 375 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.69□□□□□ -1.34
UBE4B-202ENST00000343090 OR10W1Q8NGF6 305 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 OR2K2Q8NGT1 345 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 MAP1LC3AQ9H492 121 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 CHODLQ9H9P2 273 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 PLA2G2EQ9NZK7 142 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 MRPS16Q9Y3D3 137 aaKnown RBP6.69□□□□□ -1.34
UBE4B-202ENST00000343090 ROS1P08922 2347 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 C15orf61A6NNL5 157 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 UPK2O00526 184 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 TM4SF5O14894 197 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 GPX1P07203 203 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 CFPP27918 469 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 TIMP3P35625 211 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 CA7P43166 264 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 CKS1BP61024 79 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 FAM57AQ8TBR7 257 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 FER1L5A0AVI2 2057 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 YPEL1O60688 119 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 IGKV1-5P01602 117 aa6.69□□□□□ -1.34
UBE4B-202ENST00000343090 COX6B1P14854 86 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms