RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ACTL10Q5JWF8 245 aa10.28□□□□□ -0.76
SNRNP48-201ENST00000342415 ANKHD1Q8IWZ3 2542 aaKnown RBP10.27□□□□□ -0.76
SNRNP48-201ENST00000342415 IGHV3OR16-13A0A075B7E8 117 aa10.27□□□□□ -0.76
SNRNP48-201ENST00000342415 IGHV3-74A0A0B4J1X5 117 aa10.27□□□□□ -0.76
SNRNP48-201ENST00000342415 NBEAP1P0C6P0 100 aa10.27□□□□□ -0.76
SNRNP48-201ENST00000342415 S100A7P31151 101 aa10.27□□□□□ -0.76
SNRNP48-201ENST00000342415 CRIP3Q6Q6R5 217 aa10.27□□□□□ -0.76
SNRNP48-201ENST00000342415 WFDC3Q8IUB2 231 aa10.27□□□□□ -0.76
SNRNP48-201ENST00000342415 MRPS18CQ9Y3D5 142 aaKnown RBP10.27□□□□□ -0.76
SNRNP48-201ENST00000342415 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.27□□□□□ -0.77
SNRNP48-201ENST00000342415 M0QZ24 198 aa10.27□□□□□ -0.77
SNRNP48-201ENST00000342415 GFRA3O60609 400 aa10.27□□□□□ -0.77
SNRNP48-201ENST00000342415 Q6ZS49 121 aa10.27□□□□□ -0.77
SNRNP48-201ENST00000342415 SNRNP40Q96DI7 357 aaKnown RBP10.27□□□□□ -0.77
SNRNP48-201ENST00000342415 RBM14Q96PK6 669 aaKnown RBP10.27□□□□□ -0.77
SNRNP48-201ENST00000342415 RALYQ9UKM9 306 aaKnown RBP10.27□□□□□ -0.77
SNRNP48-201ENST00000342415 C15orf61A6NNL5 157 aa10.27□□□□□ -0.77
SNRNP48-201ENST00000342415 NUDT3O95989 172 aa10.27□□□□□ -0.77
SNRNP48-201ENST00000342415 CD24P25063 80 aa10.27□□□□□ -0.77
SNRNP48-201ENST00000342415 PRRX1P54821 245 aa10.27□□□□□ -0.77
SNRNP48-201ENST00000342415 AHRRA9YTQ3 701 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 SRSF7Q16629 238 aaKnown RBP eCLIP10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 TMEM144Q7Z5S9 345 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 DMRTC2Q8IXT2 367 aaPredicted RBP10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 OR4C13Q8NGP0 309 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 TIMD4Q96H15 378 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 HIGD1AQ9Y241 93 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 LAMTOR2Q9Y2Q5 125 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 FCGR2BP31994 310 aaPredicted RBP10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 TBR1Q16650 682 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 ASCL2Q99929 193 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 NDFIP1Q9BT67 221 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 POLR3KQ9Y2Y1 108 aaPredicted RBP10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 UFC1Q9Y3C8 167 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 MYO18BQ8IUG5 2567 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 IGHV1-18A0A0C4DH31 117 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 TEX50A0A1B0GTY4 177 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 IGKV1-16P04430 117 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 PPOXP50336 477 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 C1orf194Q5T5A4 169 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 TMUB1Q9BVT8 246 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 PPP1R14DQ9NXH3 145 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 SPEGQ15772 3267 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 PEX7O00628 323 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 GLRXP35754 106 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 STXBP6Q8NFX7 210 aa10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 PARD6GQ9BYG4 376 aaPredicted RBP10.26□□□□□ -0.77
SNRNP48-201ENST00000342415 OTOGLQ3ZCN5 2332 aa10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 YPEL1O60688 119 aa10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 COMPP49747 757 aaPredicted RBP10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 BPIFA4PQ86YQ2 179 aa10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 YPEL2Q96QA6 119 aa10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 MRPL37Q9BZE1 423 aaKnown RBP10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 MBNL3Q9NUK0 354 aaKnown RBP10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 WNK1Q9H4A3 2382 aa10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 TECTAO75443 2155 aa10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 OR4C46A6NHA9 309 aa10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 ZNF324O75467 553 aaPredicted RBP10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 KIR2DL2P43627 348 aaPredicted RBP10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 FOXL1Q12952 345 aa10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 CORTO00230 105 aa10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 SELENOTP62341 195 aa10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 DUX4L9Q6RFH8 374 aaPredicted RBP10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 UNQ5815/PRO19632Q6UWF5 114 aa10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 FBXL15Q9H469 300 aa10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 LPAR2Q9HBW0 351 aa10.25□□□□□ -0.77
SNRNP48-201ENST00000342415 F2Z2F3 143 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 LYNX1G3V0Z9 82 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 J3QW42 95 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 LYNX1P0DP58 116 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 IGKV1D-17A0A075B6S4 117 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 TRBV6-6A0A0A6YYG2 114 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 NUPR1O60356 82 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 BTF3P20290 206 aaKnown RBP10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 S100A4P26447 101 aaKnown RBP10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 ZNF138P52744 262 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 ARF6P62330 175 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 RIGQ13278 110 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 TM4SF20Q53R12 229 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 FAM90A1Q86YD7 464 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 F11RQ9Y624 299 aaKnown RBP10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 IGHV3-23P01764 117 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 SLC25A34Q6PIV7 304 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 C2orf88Q9BSF0 95 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 DCAF16Q9NXF7 216 aa10.24□□□□□ -0.77
SNRNP48-201ENST00000342415 DKK1O94907 266 aa10.23□□□□□ -0.77
SNRNP48-201ENST00000342415 TMEM70Q9BUB7 260 aa10.23□□□□□ -0.77
SNRNP48-201ENST00000342415 DYSFO75923 2080 aa10.23□□□□□ -0.77
SNRNP48-201ENST00000342415 TDRG1Q3Y452 100 aa10.23□□□□□ -0.77
SNRNP48-201ENST00000342415 OR52E5Q8NH55 327 aa10.23□□□□□ -0.77
SNRNP48-201ENST00000342415 C18orf15Q96N68 181 aa10.23□□□□□ -0.77
SNRNP48-201ENST00000342415 TMEM208Q9BTX3 173 aa10.23□□□□□ -0.77
SNRNP48-201ENST00000342415 ADAMTS9Q9P2N4 1935 aa10.23□□□□□ -0.77
SNRNP48-201ENST00000342415 UPK2O00526 184 aa10.23□□□□□ -0.77
SNRNP48-201ENST00000342415 DLX1P56177 255 aa10.23□□□□□ -0.77
SNRNP48-201ENST00000342415 ZNF841Q6ZN19 808 aa10.23□□□□□ -0.77
SNRNP48-201ENST00000342415 SLC25A33Q9BSK2 321 aa10.23□□□□□ -0.77
SNRNP48-201ENST00000342415 TRAV8-1A0A0A6YYK1 113 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 SRRM5B3KS81 715 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms