RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 BORCS7Q96B45 105 aa12.37□□□□□ -0.43
BRAT1-201ENST00000340611 FNDC4Q9H6D8 234 aaPredicted RBP12.37□□□□□ -0.43
BRAT1-201ENST00000340611 HES4Q9HCC6 221 aa12.37□□□□□ -0.43
BRAT1-201ENST00000340611 NDUFB4O95168 129 aa12.37□□□□□ -0.43
BRAT1-201ENST00000340611 CLDN1O95832 211 aa12.37□□□□□ -0.43
BRAT1-201ENST00000340611 LOXP28300 417 aaPredicted RBP12.37□□□□□ -0.43
BRAT1-201ENST00000340611 EDDM3AQ14507 147 aa12.37□□□□□ -0.43
BRAT1-201ENST00000340611 CHRDL1Q9BU40 450 aa12.37□□□□□ -0.43
BRAT1-201ENST00000340611 CDC42EP3Q9UKI2 254 aa12.37□□□□□ -0.43
BRAT1-201ENST00000340611 IGKV1D-17A0A075B6S4 117 aa12.36□□□□□ -0.43
BRAT1-201ENST00000340611 A0A1W2PS18 150 aa12.36□□□□□ -0.43
BRAT1-201ENST00000340611 G3V4G9 280 aa12.36□□□□□ -0.43
BRAT1-201ENST00000340611 AZU1P20160 251 aa12.36□□□□□ -0.43
BRAT1-201ENST00000340611 C5orf17Q8NAS9 161 aa12.36□□□□□ -0.43
BRAT1-201ENST00000340611 OR10W1Q8NGF6 305 aa12.36□□□□□ -0.43
BRAT1-201ENST00000340611 CLEC7AQ9BXN2 247 aa12.36□□□□□ -0.43
BRAT1-201ENST00000340611 PPIAL4GP0DN37 164 aa12.36□□□□□ -0.43
BRAT1-201ENST00000340611 ZNF146Q15072 292 aa12.36□□□□□ -0.43
BRAT1-201ENST00000340611 OR8I2Q8N0Y5 310 aa12.36□□□□□ -0.43
BRAT1-201ENST00000340611 MDFIC2A0A1B0GVS7 189 aa12.35□□□□□ -0.43
BRAT1-201ENST00000340611 GAGE10A6NGK3 116 aa12.35□□□□□ -0.43
BRAT1-201ENST00000340611 MT-CO2P00403 227 aa12.35□□□□□ -0.43
BRAT1-201ENST00000340611 RAB9AP51151 201 aa12.35□□□□□ -0.43
BRAT1-201ENST00000340611 NEIL1Q96FI4 390 aaPredicted RBP12.35□□□□□ -0.43
BRAT1-201ENST00000340611 THYN1Q9P016 225 aa12.35□□□□□ -0.43
BRAT1-201ENST00000340611 A0A1B0GV72 72 aa12.35□□□□□ -0.43
BRAT1-201ENST00000340611 SRRM5B3KS81 715 aa12.35□□□□□ -0.43
BRAT1-201ENST00000340611 TMEM250H0YL14 139 aa12.35□□□□□ -0.43
BRAT1-201ENST00000340611 CA2P00918 260 aa12.35□□□□□ -0.43
BRAT1-201ENST00000340611 CRYBA4P53673 196 aa12.35□□□□□ -0.43
BRAT1-201ENST00000340611 Q8IYB0 196 aa12.35□□□□□ -0.43
BRAT1-201ENST00000340611 SAP30LQ9HAJ7 183 aa12.35□□□□□ -0.43
BRAT1-201ENST00000340611 C11orf94C9JXX5 98 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 YPEL3P61236 119 aaPredicted RBP12.34□□□□□ -0.43
BRAT1-201ENST00000340611 FAM71F2Q6NXP2 309 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 SFRP2Q96HF1 295 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 MRPL27Q9P0M9 148 aaKnown RBP12.34□□□□□ -0.43
BRAT1-201ENST00000340611 ARHGAP32A7KAX9 2087 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 PRDX2P32119 198 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 ARF6P62330 175 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 ZNF672Q499Z4 452 aaPredicted RBP12.34□□□□□ -0.43
BRAT1-201ENST00000340611 ZNF585BQ52M93 769 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 FAM90A1Q86YD7 464 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 STPG3Q8N7X2 389 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 OR10G9Q8NGN4 311 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 OR10G7Q8NGN6 311 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 M0R1X1 148 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 IGLV2-14P01704 120 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 ESDP10768 282 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 NAT8BQ9UHF3 227 aa12.34□□□□□ -0.43
BRAT1-201ENST00000340611 USP9YO00507 2555 aaPredicted RBP12.33□□□□□ -0.44
BRAT1-201ENST00000340611 SERTM2A0A1B0GWG4 89 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A10PA6NDY2 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A18PA6NE21 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A16PA6NEW6 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A20PA6NIJ5 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A8PA6NJQ4 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A7PA6NKC0 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A22PA8MWA6 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A12PA8MX19 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A5PA8MXJ8 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A23PA8MXZ1 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A15PP0C7V4 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A13PP0C7W8 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A14PP0C7W9 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM90A24PP0C7X0 464 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 SLC25A6P12236 298 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 MC5RP33032 325 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FOXL1Q12952 345 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 ZNF808Q8N4W9 903 aaPredicted RBP12.33□□□□□ -0.44
BRAT1-201ENST00000340611 COQ2Q96H96 371 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 CCL13Q99616 98 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 TRAPPC2LQ9UL33 140 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 A6NJY4 79 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 ZNF207O43670 478 aaKnown RBP12.33□□□□□ -0.44
BRAT1-201ENST00000340611 ATP5G3P48201 142 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 LTC4SQ16873 150 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 PNKDQ8N490 385 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 FAM216BQ8N7L0 139 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 OR5B3Q8NH48 314 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 RFESDQ8TAC1 157 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 RNF7Q9UBF6 113 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 ARL2-SNX15V9GYD0 113 aa12.33□□□□□ -0.44
BRAT1-201ENST00000340611 ABCA12Q86UK0 2595 aa12.32□□□□□ -0.44
BRAT1-201ENST00000340611 IGHV3-7P01780 117 aa12.32□□□□□ -0.44
BRAT1-201ENST00000340611 RPS20P60866 119 aaKnown RBP12.32□□□□□ -0.44
BRAT1-201ENST00000340611 GNB1P62873 340 aa12.32□□□□□ -0.44
BRAT1-201ENST00000340611 SPINK9Q5DT21 86 aa12.32□□□□□ -0.44
BRAT1-201ENST00000340611 BVES-AS1Q5T3Y7 98 aa12.32□□□□□ -0.44
BRAT1-201ENST00000340611 CELSR1Q9NYQ6 3014 aa12.32□□□□□ -0.44
BRAT1-201ENST00000340611 CTXND1A0A1B0GTU2 59 aa12.32□□□□□ -0.44
BRAT1-201ENST00000340611 LHBP01229 141 aa12.32□□□□□ -0.44
BRAT1-201ENST00000340611 SRSF7Q16629 238 aaKnown RBP eCLIP12.32□□□□□ -0.44
BRAT1-201ENST00000340611 LSM10Q969L4 123 aaKnown RBP12.32□□□□□ -0.44
BRAT1-201ENST00000340611 FBN2P35556 2912 aa12.32□□□□□ -0.44
BRAT1-201ENST00000340611 TRAV9-2A0A087WT02 112 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 A1L4Q6 167 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 ZNF324O75467 553 aaPredicted RBP12.31□□□□□ -0.44
BRAT1-201ENST00000340611 S1PR2O95136 353 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 IGLC1P0CG04 106 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms