RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 PRDM6Q9NQX0 595 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 CHCHD2Q9Y6H1 151 aaPredicted RBP7.3□□□□□ -1.24
RTN3-202ENST00000339997 ZSWIM8A7E2V4 1837 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 ABCA2Q9BZC7 2435 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 NACAE9PAV3 2078 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 LIPFP07098 398 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 SELLP14151 372 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 GLMPQ8WWB7 406 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 TXNDC17Q9BRA2 123 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 TMEM56-RWDD3S4R434 201 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 TRAV12-3A0A0B4J271 114 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 C9orf172C9J069 976 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 FAM90A26D6RGX4 464 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 CCL21O00585 134 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 SYNGR3O43761 229 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 OR9G1Q8NH87 305 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 J3QRE1 110 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 VENTXO95231 258 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 CD5P06127 495 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 GPX1P07203 203 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 TMEM95Q3KNT9 176 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 FBLN7Q53RD9 439 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 C10orf55Q5SWW7 151 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 SPATA31B1PQ5VZV4 182 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 LINC00114Q6XXX2 140 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 ZNF664Q8N3J9 261 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 RPP25LQ8N5L8 163 aaKnown RBP7.29□□□□□ -1.24
RTN3-202ENST00000339997 BEND2Q8NDZ0 799 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 CHODLQ9H9P2 273 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 IDI2-AS1Q9NZ38 188 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 CDC42EP3Q9UKI2 254 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 A0A1W2PS18 150 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 PEX7O00628 323 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 EVI2AP22794 236 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 HIST1H1AQ02539 215 aaPredicted RBP7.29□□□□□ -1.24
RTN3-202ENST00000339997 RIPPLY2Q5TAB7 128 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 NFAM1Q8NET5 270 aaPredicted RBP7.29□□□□□ -1.24
RTN3-202ENST00000339997 TMEM170AQ8WVE7 144 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 GPR82Q96P67 336 aa7.29□□□□□ -1.24
RTN3-202ENST00000339997 A0A1B0GV72 72 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 EREGO14944 169 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 LYPD3O95274 346 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 MYOD1P15172 320 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 TIMP3P35625 211 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 ZNF56Q15929 161 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 CCDC144NLQ6NUI1 221 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 VKORC1Q9BQB6 163 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 hDV102S1A0JD36 115 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 NPIPB4C9JG80 1138 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 CA7P43166 264 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 ASPHD1Q5U4P2 390 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 FAM53AQ6NSI3 398 aaPredicted RBP7.28□□□□□ -1.24
RTN3-202ENST00000339997 LCNL1Q6ZST4 164 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 OR10W1Q8NGF6 305 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 OR52E5Q8NH55 327 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 VWCEQ96DN2 955 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 TM2D1Q9BX74 207 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 PKIBQ9C010 78 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 PPIAL4CA0A0B4J2A2 164 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 PF4P02776 101 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 PPIAL4GP0DN37 164 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 LGALS3P17931 250 aaKnown RBP7.28□□□□□ -1.24
RTN3-202ENST00000339997 OR5AN1Q8NGI8 311 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 DOCK1Q14185 1865 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 IGHV3-64A0A075B6Q5 118 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 A0A1B0GUT8 65 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 C19orf67A6NJJ6 358 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 LYNX1G3V0Z9 82 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 LYNX1P0DP58 116 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 GPR183P32249 361 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 PTGDSP41222 190 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 FOXL1Q12952 345 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 SAMD13Q5VXD3 122 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 OR10J6PQ8NGY7 276 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 SEMA5BQ9P283 1151 aa7.28□□□□□ -1.24
RTN3-202ENST00000339997 EFNA2O43921 213 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 CECR9P0C854 216 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 RPL32P62910 135 aaKnown RBP7.27□□□□□ -1.25
RTN3-202ENST00000339997 LINC01560Q8TB33 94 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 WBP1Q96G27 269 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 METTL26Q96S19 204 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 IFI27L2Q9H2X8 130 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 TSC2P49815 1807 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 PDCD11Q14690 1871 aaKnown RBP7.27□□□□□ -1.25
RTN3-202ENST00000339997 TDRD15B5MCY1 1934 aaKnown RBP7.27□□□□□ -1.25
RTN3-202ENST00000339997 MALRD1Q5VYJ5 2156 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 OTOGLQ3ZCN5 2332 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 A0A087X0K7 114 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM90A10PA6NDY2 464 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM90A18PA6NE21 464 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM90A16PA6NEW6 464 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM90A20PA6NIJ5 464 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM90A8PA6NJQ4 464 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM90A7PA6NKC0 464 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM90A22PA8MWA6 464 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM90A12PA8MX19 464 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM90A5PA8MXJ8 464 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM90A23PA8MXZ1 464 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM90A15PP0C7V4 464 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM90A13PP0C7W8 464 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms