RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 MT-ND6P03923 174 aa12.14□□□□□ -0.47
FGFR1-202ENST00000335922 IL6RP08887 468 aaPredicted RBP12.14□□□□□ -0.47
FGFR1-202ENST00000335922 ZNF497Q6ZNH5 498 aa12.14□□□□□ -0.47
FGFR1-202ENST00000335922 KCNS1Q96KK3 526 aa12.14□□□□□ -0.47
FGFR1-202ENST00000335922 SEBOXQ9HB31 216 aaPredicted RBP12.14□□□□□ -0.47
FGFR1-202ENST00000335922 IGHG3P01860 377 aa12.13□□□□□ -0.47
FGFR1-202ENST00000335922 HLA-DQA1P01909 254 aa12.13□□□□□ -0.47
FGFR1-202ENST00000335922 KLF2Q9Y5W3 355 aaPredicted RBP12.13□□□□□ -0.47
FGFR1-202ENST00000335922 FOXI3A8MTJ6 420 aaPredicted RBP12.13□□□□□ -0.47
FGFR1-202ENST00000335922 ACP7Q6ZNF0 438 aa12.13□□□□□ -0.47
FGFR1-202ENST00000335922 MBD3L1Q8WWY6 194 aa12.13□□□□□ -0.47
FGFR1-202ENST00000335922 NABP2Q9BQ15 211 aa12.13□□□□□ -0.47
FGFR1-202ENST00000335922 PRNDQ9UKY0 176 aa12.13□□□□□ -0.47
FGFR1-202ENST00000335922 LINC00473A8K010 186 aa12.13□□□□□ -0.47
FGFR1-202ENST00000335922 NRN1LQ496H8 165 aa12.13□□□□□ -0.47
FGFR1-202ENST00000335922 MED12LQ86YW9 2145 aa12.12□□□□□ -0.47
FGFR1-202ENST00000335922 JMJD1CQ15652 2540 aa12.12□□□□□ -0.47
FGFR1-202ENST00000335922 TRBV24-1A0A075B6N3 115 aa12.12□□□□□ -0.47
FGFR1-202ENST00000335922 ADTRPQ96IZ2 230 aa12.12□□□□□ -0.47
FGFR1-202ENST00000335922 PMCHL2Q9BQD1 86 aa12.12□□□□□ -0.47
FGFR1-202ENST00000335922 A8MWL6 223 aa12.12□□□□□ -0.47
FGFR1-202ENST00000335922 GZMBP10144 247 aa12.12□□□□□ -0.47
FGFR1-202ENST00000335922 PRSS8Q16651 343 aa12.12□□□□□ -0.47
FGFR1-202ENST00000335922 OR1L8Q8NGR8 309 aa12.12□□□□□ -0.47
FGFR1-202ENST00000335922 SZT2Q5T011 3432 aa12.12□□□□□ -0.47
FGFR1-202ENST00000335922 OR4C46A6NHA9 309 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 MAS1LP35410 378 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 SPSB4Q96A44 273 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 NUDT3O95989 172 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 HAPLN4Q86UW8 402 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 TMEM116Q8NCL8 245 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 NEUROG1Q92886 237 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 PIMREGQ9BSJ6 248 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 ETV2O00321 342 aaPredicted RBP12.11□□□□□ -0.47
FGFR1-202ENST00000335922 MPDU1O75352 247 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 PRB1P04280 392 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 RPL7P18124 248 aaKnown RBP12.11□□□□□ -0.47
FGFR1-202ENST00000335922 PDLIM4P50479 330 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 ECSCRQ19T08 205 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 TMEM170AQ8WVE7 144 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 FGF23Q9GZV9 251 aaPredicted RBP12.11□□□□□ -0.47
FGFR1-202ENST00000335922 F11RQ9Y624 299 aaKnown RBP12.11□□□□□ -0.47
FGFR1-202ENST00000335922 LOC105371242A0A075B767 164 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 CIDEAO60543 219 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 RND2P52198 227 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 HSPE1P61604 102 aaKnown RBP12.11□□□□□ -0.47
FGFR1-202ENST00000335922 LY6EQ16553 131 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 SLC25A34Q6PIV7 304 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 SCGB1D4Q6XE38 83 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 GTF3AQ92664 365 aaKnown RBP12.11□□□□□ -0.47
FGFR1-202ENST00000335922 RASL11BQ9BPW5 248 aa12.11□□□□□ -0.47
FGFR1-202ENST00000335922 LRRK2Q5S007 2527 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 MBD3L4A6NDZ8 208 aaPredicted RBP12.1□□□□□ -0.47
FGFR1-202ENST00000335922 MBD3L3A6NE82 208 aaPredicted RBP12.1□□□□□ -0.47
FGFR1-202ENST00000335922 MBD3L5A6NJ08 208 aaPredicted RBP12.1□□□□□ -0.47
FGFR1-202ENST00000335922 J3QW42 95 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 EREGO14944 169 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 MOSP00540 346 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 CA7P43166 264 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 PNKDQ8N490 385 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 MBD3L2Q8NHZ7 208 aaPredicted RBP12.1□□□□□ -0.47
FGFR1-202ENST00000335922 SEPSECSQ9HD40 501 aaKnown RBP12.1□□□□□ -0.47
FGFR1-202ENST00000335922 CHD3Q12873 2000 aaKnown RBP12.1□□□□□ -0.47
FGFR1-202ENST00000335922 FOXH1O75593 365 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 PMCHL1Q16048 86 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 SSC4DQ8WTU2 575 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 MUC21A0A0G2JKD1 596 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 MUC21A0A140T8X8 626 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 ZNF207O43670 478 aaKnown RBP12.1□□□□□ -0.47
FGFR1-202ENST00000335922 KIR2DS2P43631 304 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 TMEM177Q53S58 311 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 MUC21Q5SSG8 566 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 ASCL4Q6XD76 172 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 VSTM2AQ8TAG5 236 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 NPIPB3Q92617 1050 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 HSPB8Q9UJY1 196 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 PTPRSQ13332 1948 aa12.1□□□□□ -0.47
FGFR1-202ENST00000335922 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.09□□□□□ -0.47
FGFR1-202ENST00000335922 F5H697 171 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 SLC25A17O43808 307 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 GCSHP23434 173 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 RIGQ13278 110 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 MLANAQ16655 118 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 C19orf35Q6ZS72 473 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 FOXL2NBQ6ZUU3 175 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 LINC01551Q86U37 167 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 RBM14Q96PK6 669 aaKnown RBP12.09□□□□□ -0.47
FGFR1-202ENST00000335922 SSBP4Q9BWG4 385 aaPredicted RBP12.09□□□□□ -0.47
FGFR1-202ENST00000335922 HSPB7Q9UBY9 170 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 USP9YO00507 2555 aaPredicted RBP12.09□□□□□ -0.47
FGFR1-202ENST00000335922 A6NDN8 102 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 GNG7O60262 68 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 IGLV3-1P01715 115 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 WDR82Q6UXN9 313 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 TGFAP01135 160 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 TM4SF20Q53R12 229 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 FAM168AQ92567 244 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 EAF1Q96JC9 268 aaPredicted RBP12.09□□□□□ -0.47
FGFR1-202ENST00000335922 ZNRD1Q9P1U0 126 aa12.09□□□□□ -0.47
FGFR1-202ENST00000335922 CCL3L1P16619 93 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms