RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ACSM6Q6P461 480 aa10.86□□□□□ -0.67
APOBEC3B-202ENST00000335760 FNDC4Q9H6D8 234 aaPredicted RBP10.86□□□□□ -0.67
APOBEC3B-202ENST00000335760 OR2T8A6NH00 312 aa10.85□□□□□ -0.67
APOBEC3B-202ENST00000335760 PPP5D1E7EU14 171 aa10.85□□□□□ -0.67
APOBEC3B-202ENST00000335760 H0YIZ8 118 aa10.85□□□□□ -0.67
APOBEC3B-202ENST00000335760 GIPP09681 153 aaPredicted RBP10.85□□□□□ -0.67
APOBEC3B-202ENST00000335760 GPR183P32249 361 aa10.85□□□□□ -0.67
APOBEC3B-202ENST00000335760 ARL3P36405 182 aa10.85□□□□□ -0.67
APOBEC3B-202ENST00000335760 CAV2P51636 162 aa10.85□□□□□ -0.67
APOBEC3B-202ENST00000335760 ZNF616Q08AN1 781 aa10.85□□□□□ -0.67
APOBEC3B-202ENST00000335760 TMEM14EPQ6UXP3 125 aa10.85□□□□□ -0.67
APOBEC3B-202ENST00000335760 ZC4H2Q9NQZ6 224 aa10.85□□□□□ -0.67
APOBEC3B-202ENST00000335760 OR5AC2Q9NZP5 309 aa10.85□□□□□ -0.67
APOBEC3B-202ENST00000335760 FAM24AA6NFZ4 105 aa10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 E5RGE8 158 aa10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 F8W735 103 aaPredicted RBP10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 BMPR1BO00238 502 aa10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 MPC2O95563 127 aa10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 METTL15P1P0C7V9 234 aa10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 GPX4P36969 197 aaPredicted RBP10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 CD69Q07108 199 aa10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 FHL3Q13643 280 aa10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 ETFRF1Q6IPR1 90 aa10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 SLC16A13Q7RTY0 426 aa10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 ASB13Q8WXK3 278 aa10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 TXN2Q99757 166 aa10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 MRPL36Q9P0J6 103 aaKnown RBP10.84□□□□□ -0.67
APOBEC3B-202ENST00000335760 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 GNG7O60262 68 aa10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 CCNKO75909 580 aa10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 PET100P0DJ07 73 aa10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 SLC25A4P12235 298 aa10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 FCGR2BP31994 310 aaPredicted RBP10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 NPBWR1P48145 328 aa10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 SLURP1P55000 103 aa10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 OR8G2PQ6IF36 304 aa10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 PRSS54Q6PEW0 395 aa10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 CHAC2Q8WUX2 184 aa10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 BSCL2Q96G97 398 aaPredicted RBP10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 ATP6V0BQ99437 205 aa10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 RNF126Q9BV68 326 aa10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 LYRM2Q9NU23 88 aaPredicted RBP10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 GAR1Q9NY12 217 aaKnown RBP10.83□□□□□ -0.68
APOBEC3B-202ENST00000335760 IGSF23A1L1A6 192 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 PMS2P5A8MQ11 134 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 PRSS46E5RG02 174 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 TGOLN2O43493 480 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 GGCTO75223 188 aaKnown RBP10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 ZP3P21754 424 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 HOXD3P31249 432 aaPredicted RBP10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 P2RY1P47900 373 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 RND2P52198 227 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 RAP2BP61225 183 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 RPEL1Q2QD12 228 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 OR4X1Q8NH49 305 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 NPIPB3Q92617 1050 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 ACY3Q96HD9 319 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 SLC35E1Q96K37 410 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 MBD2Q9UBB5 411 aa10.82□□□□□ -0.68
APOBEC3B-202ENST00000335760 TRAV14DV4A0A0A6YYC5 116 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 CLN5O75503 358 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 CST7O76096 145 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 OR2C1O95371 312 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 GAMTQ14353 236 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 LCE2DQ5TA82 110 aaPredicted RBP10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 SPSB3Q6PJ21 355 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 HAPLN4Q86UW8 402 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 TMEM252Q8N6L7 170 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 LINC00482Q8N8I6 264 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 OR10P1Q8NGE3 313 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 THAP6Q8TBB0 222 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 CACNG8Q8WXS5 425 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 DCUN1D4Q92564 292 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 CHRDL1Q9BU40 450 aa10.81□□□□□ -0.68
APOBEC3B-202ENST00000335760 IGHV3-35A0A0C4DH35 117 aa10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 NUPL2O15504 423 aaKnown RBP10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 CTSGP08311 255 aa10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 ADMP35318 185 aa10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 FGL1Q08830 312 aa10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 ARL16Q0P5N6 197 aa10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 Q5BKY6 102 aa10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 ACOT7LQ6ZUV0 252 aa10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 STX12Q86Y82 276 aa10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 TMEM116Q8NCL8 245 aa10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 OR2T35Q8NGX2 323 aa10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 DLX4Q92988 240 aaPredicted RBP10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 SLC25A31Q9H0C2 315 aa10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 TRRAPQ9Y4A5 3859 aa10.8□□□□□ -0.68
APOBEC3B-202ENST00000335760 TRAV30A0A087WSZ9 112 aa10.79□□□□□ -0.68
APOBEC3B-202ENST00000335760 A0A1B0GVG6 124 aa10.79□□□□□ -0.68
APOBEC3B-202ENST00000335760 SMCO3A2RU48 225 aa10.79□□□□□ -0.68
APOBEC3B-202ENST00000335760 SCAF4O95104 1147 aaKnown RBP10.79□□□□□ -0.68
APOBEC3B-202ENST00000335760 LYL1P12980 280 aa10.79□□□□□ -0.68
APOBEC3B-202ENST00000335760 SULT1A1P50225 295 aa10.79□□□□□ -0.68
APOBEC3B-202ENST00000335760 SYNJ2BPP57105 145 aa10.79□□□□□ -0.68
APOBEC3B-202ENST00000335760 KLF5Q13887 457 aaPredicted RBP10.79□□□□□ -0.68
APOBEC3B-202ENST00000335760 PRR31Q5SQ13 230 aa10.79□□□□□ -0.68
APOBEC3B-202ENST00000335760 TMEM217Q8N7C4 229 aa10.79□□□□□ -0.68
APOBEC3B-202ENST00000335760 OVOL1O14753 267 aa10.78□□□□□ -0.68
APOBEC3B-202ENST00000335760 SCGB2A1O75556 95 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms