RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SSBP4Q9BWG4 385 aaPredicted RBP19.22■□□□□ 0.67
TSKU-201ENST00000333090 FAM181BA6NEQ2 426 aa19.22■□□□□ 0.67
TSKU-201ENST00000333090 C2orf83Q53S99 150 aa19.22■□□□□ 0.67
TSKU-201ENST00000333090 RNASEKQ6P5S7 137 aaKnown RBP19.22■□□□□ 0.67
TSKU-201ENST00000333090 PNKDQ8N490 385 aa19.22■□□□□ 0.67
TSKU-201ENST00000333090 ZNF883P0CG24 379 aa19.21■□□□□ 0.67
TSKU-201ENST00000333090 RNASE2P10153 161 aaKnown RBP19.21■□□□□ 0.67
TSKU-201ENST00000333090 PRR31Q5SQ13 230 aa19.21■□□□□ 0.67
TSKU-201ENST00000333090 OR2T6Q8NHC8 308 aa19.21■□□□□ 0.67
TSKU-201ENST00000333090 SNRNP40Q96DI7 357 aaKnown RBP19.21■□□□□ 0.67
TSKU-201ENST00000333090 CFHR2P36980 270 aa19.21■□□□□ 0.67
TSKU-201ENST00000333090 CAMPP49913 170 aa19.21■□□□□ 0.67
TSKU-201ENST00000333090 CD69Q07108 199 aa19.21■□□□□ 0.67
TSKU-201ENST00000333090 EBLN2Q6P2I7 272 aa19.21■□□□□ 0.67
TSKU-201ENST00000333090 VHLLQ6RSH7 139 aa19.21■□□□□ 0.67
TSKU-201ENST00000333090 ORAOV1Q8WV07 137 aa19.21■□□□□ 0.67
TSKU-201ENST00000333090 RND1Q92730 232 aa19.21■□□□□ 0.67
TSKU-201ENST00000333090 RP1L1Q8IWN7 2480 aaPredicted RBP19.21■□□□□ 0.67
TSKU-201ENST00000333090 CACNA1GO43497 2377 aa19.21■□□□□ 0.67
TSKU-201ENST00000333090 DEFB108BQ8NET1 73 aa19.2■□□□□ 0.66
TSKU-201ENST00000333090 WIPF2Q8TF74 440 aaPredicted RBP19.2■□□□□ 0.66
TSKU-201ENST00000333090 CT45A6P0DMU7 189 aa19.2■□□□□ 0.66
TSKU-201ENST00000333090 CT45A5P0DMU8 189 aa19.2■□□□□ 0.66
TSKU-201ENST00000333090 CT45A7P0DMV0 189 aa19.2■□□□□ 0.66
TSKU-201ENST00000333090 NUDT10Q8NFP7 164 aa19.2■□□□□ 0.66
TSKU-201ENST00000333090 ITLN1Q8WWA0 313 aa19.2■□□□□ 0.66
TSKU-201ENST00000333090 NUDT11Q96G61 164 aa19.2■□□□□ 0.66
TSKU-201ENST00000333090 MRPL32Q9BYC8 188 aaKnown RBP19.2■□□□□ 0.66
TSKU-201ENST00000333090 RAB9BQ9NP90 201 aa19.2■□□□□ 0.66
TSKU-201ENST00000333090 SAA1P0DJI8 122 aaPredicted RBP19.19■□□□□ 0.66
TSKU-201ENST00000333090 TBR1Q16650 682 aa19.19■□□□□ 0.66
TSKU-201ENST00000333090 SAP30LQ9HAJ7 183 aa19.19■□□□□ 0.66
TSKU-201ENST00000333090 ASCL3Q9NQ33 180 aa19.19■□□□□ 0.66
TSKU-201ENST00000333090 MRPS16Q9Y3D3 137 aaKnown RBP19.19■□□□□ 0.66
TSKU-201ENST00000333090 ARFGEF3Q5TH69 2177 aa19.19■□□□□ 0.66
TSKU-201ENST00000333090 MBD6Q96DN6 1003 aa19.19■□□□□ 0.66
TSKU-201ENST00000333090 BET1LQ9NYM9 111 aa19.19■□□□□ 0.66
TSKU-201ENST00000333090 DSCAML1Q8TD84 2053 aa19.18■□□□□ 0.66
TSKU-201ENST00000333090 TRAV9-2A0A087WT02 112 aa19.18■□□□□ 0.66
TSKU-201ENST00000333090 PLA2G2CQ5R387 149 aa19.18■□□□□ 0.66
TSKU-201ENST00000333090 RASL11AQ6T310 242 aa19.18■□□□□ 0.66
TSKU-201ENST00000333090 TNFRSF19Q9NS68 423 aa19.18■□□□□ 0.66
TSKU-201ENST00000333090 NKX2-8O15522 239 aa19.18■□□□□ 0.66
TSKU-201ENST00000333090 SSBP2P81877 361 aaPredicted RBP19.18■□□□□ 0.66
TSKU-201ENST00000333090 OR1L8Q8NGR8 309 aa19.18■□□□□ 0.66
TSKU-201ENST00000333090 PSMB11A5LHX3 300 aa19.17■□□□□ 0.66
TSKU-201ENST00000333090 GRAMD2BQ96HH9 432 aa19.17■□□□□ 0.66
TSKU-201ENST00000333090 IGHV2-26A0A0B4J1V2 119 aa19.17■□□□□ 0.66
TSKU-201ENST00000333090 HIGD1CA8MV81 97 aa19.17■□□□□ 0.66
TSKU-201ENST00000333090 PEX7O00628 323 aa19.17■□□□□ 0.66
TSKU-201ENST00000333090 COX7A2P2O60397 106 aa19.17■□□□□ 0.66
TSKU-201ENST00000333090 LHBP01229 141 aa19.17■□□□□ 0.66
TSKU-201ENST00000333090 IGHG3P01860 377 aa19.17■□□□□ 0.66
TSKU-201ENST00000333090 IGLL1P15814 213 aa19.17■□□□□ 0.66
TSKU-201ENST00000333090 UBE2G1P62253 170 aa19.17■□□□□ 0.66
TSKU-201ENST00000333090 OR5B3Q8NH48 314 aa19.17■□□□□ 0.66
TSKU-201ENST00000333090 PAXXQ9BUH6 204 aa19.17■□□□□ 0.66
TSKU-201ENST00000333090 A0A1W2PN81 502 aa19.16■□□□□ 0.66
TSKU-201ENST00000333090 IGHV3-48P01763 117 aa19.16■□□□□ 0.66
TSKU-201ENST00000333090 FAM231DQ6ZW35 169 aa19.16■□□□□ 0.66
TSKU-201ENST00000333090 ALKBH7Q9BT30 221 aaPredicted RBP19.16■□□□□ 0.66
TSKU-201ENST00000333090 OR8B3Q8NGG8 313 aa19.16■□□□□ 0.66
TSKU-201ENST00000333090 SGK494Q96LW2 274 aa19.16■□□□□ 0.66
TSKU-201ENST00000333090 OR8B2Q96RD0 313 aa19.16■□□□□ 0.66
TSKU-201ENST00000333090 CORTO00230 105 aa19.16■□□□□ 0.66
TSKU-201ENST00000333090 CCL11P51671 97 aa19.16■□□□□ 0.66
TSKU-201ENST00000333090 BHLHA15Q7RTS1 189 aaPredicted RBP19.16■□□□□ 0.66
TSKU-201ENST00000333090 ZNF329Q86UD4 541 aa19.16■□□□□ 0.66
TSKU-201ENST00000333090 RNASE8Q8TDE3 154 aaKnown RBP19.16■□□□□ 0.66
TSKU-201ENST00000333090 ZNF71Q9NQZ8 489 aaPredicted RBP19.16■□□□□ 0.66
TSKU-201ENST00000333090 COX11Q9Y6N1 276 aa19.16■□□□□ 0.66
TSKU-201ENST00000333090 LEMD1Q68G75 181 aa19.15■□□□□ 0.66
TSKU-201ENST00000333090 KIR3DL3Q8N743 410 aa19.15■□□□□ 0.66
TSKU-201ENST00000333090 ZNF738Q8NE65 137 aa19.15■□□□□ 0.66
TSKU-201ENST00000333090 ATMQ13315 3056 aa19.15■□□□□ 0.66
TSKU-201ENST00000333090 ATP5IP56385 69 aaPredicted RBP19.15■□□□□ 0.66
TSKU-201ENST00000333090 GNG5P63218 68 aa19.15■□□□□ 0.66
TSKU-201ENST00000333090 C10orf113Q5VZT2 155 aa19.15■□□□□ 0.66
TSKU-201ENST00000333090 CLEC5AQ9NY25 188 aa19.15■□□□□ 0.66
TSKU-201ENST00000333090 NAV3Q8IVL0 2385 aa19.15■□□□□ 0.66
TSKU-201ENST00000333090 C2orf70A6NJV1 201 aa19.14■□□□□ 0.65
TSKU-201ENST00000333090 PLAUP00749 431 aa19.14■□□□□ 0.65
TSKU-201ENST00000333090 KLF3P57682 345 aaPredicted RBP19.14■□□□□ 0.65
TSKU-201ENST00000333090 KLF5Q13887 457 aaPredicted RBP19.14■□□□□ 0.65
TSKU-201ENST00000333090 OR2D3Q8NGH3 330 aa19.14■□□□□ 0.65
TSKU-201ENST00000333090 CCL13Q99616 98 aa19.14■□□□□ 0.65
TSKU-201ENST00000333090 PLSCR4Q9NRQ2 329 aa19.14■□□□□ 0.65
TSKU-201ENST00000333090 PLCE1Q9P212 2302 aa19.14■□□□□ 0.65
TSKU-201ENST00000333090 TANC2Q9HCD6 1990 aa19.14■□□□□ 0.65
TSKU-201ENST00000333090 M0R1B8 84 aa19.14■□□□□ 0.65
TSKU-201ENST00000333090 DLL1O00548 723 aa19.14■□□□□ 0.65
TSKU-201ENST00000333090 FAM216BQ8N7L0 139 aa19.14■□□□□ 0.65
TSKU-201ENST00000333090 ZNF714Q96N38 554 aa19.14■□□□□ 0.65
TSKU-201ENST00000333090 PRR33A8MZF0 331 aa19.13■□□□□ 0.65
TSKU-201ENST00000333090 H0YJW9 148 aa19.13■□□□□ 0.65
TSKU-201ENST00000333090 UBE2V1Q13404 147 aa19.13■□□□□ 0.65
TSKU-201ENST00000333090 SPATA12Q7Z6I5 190 aa19.13■□□□□ 0.65
TSKU-201ENST00000333090 CACNG8Q8WXS5 425 aa19.13■□□□□ 0.65
TSKU-201ENST00000333090 HARBI1Q96MB7 349 aa19.13■□□□□ 0.65
TSKU-201ENST00000333090 PROCRQ9UNN8 238 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms